Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g173880 Pisum sativum HOM05D010459 ORTHO05D004756 3.0e-66 255.0 124 100.0
Psat1g216160 Pisum sativum HOM05D010459 ORTHO05D004756 2.7e-43 178.7 138 69.6
TPR.G39545 Trifolium pratense HOM05D007230 ORTHO05D004756 6.5e-37 157.5 115 65.2
TPR.G13973 Trifolium pratense HOM05D007230 ORTHO05D004756 8.5e-37 157.1 108 67.6
Lalb_Chr17g0347801 Lupinus albus HOM05D010459 ORTHO05D004756 9.4e-28 127.1 125 56.0
SHI31302 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-23 112.5 118 51.7
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 3.1e-23 112.1 101 57.4
SHI11999 Sapria himalayana HOM05D000002 ORTHO05D000001 4.5e-22 108.2 101 55.4
Potri.013G133550 Populus trichocarpa HOM05D010459 ORTHO05D004756 1.7e-21 106.3 98 55.1
SHI05604 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-21 106.3 101 55.4
SHI17244 Sapria himalayana HOM05D007230 ORTHO05D004756 2.2e-21 105.9 106 53.8
SHI15740 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-21 105.5 101 55.4
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 3.8e-21 105.1 101 55.4
SHI47374 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-21 105.1 101 55.4
SHI12633 Sapria himalayana HOM05D000002 ORTHO05D004756 5.0e-21 104.8 118 49.2
SHI16498 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-21 104.8 101 55.4
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-21 104.8 101 54.5
SHI45992 Sapria himalayana HOM05D000002 ORTHO05D000001 8.5e-21 104.0 101 54.5
SHI29623 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-20 102.8 101 54.5
SHI40782 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-20 102.8 101 55.4
SHI54737 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-20 102.8 101 54.5
Actinidia05629 Actinidia chinensis HOM05D007230 ORTHO05D004756 2.5e-20 102.4 109 49.5
SHI02112 Sapria himalayana HOM05D000002 ORTHO05D000001 2.5e-20 102.4 101 55.4
SHI24644 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-20 102.1 99 53.5
SHI28040 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-20 102.1 101 54.5
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-20 102.1 101 55.4
SHI53716 Sapria himalayana HOM05D000002 ORTHO05D000001 3.2e-20 102.1 99 53.5
SHI09801 Sapria himalayana HOM05D007230 ORTHO05D004756 4.2e-20 101.7 101 53.5
PSO782G2577 Papaver somniferum HOM05D000002 ORTHO05D004756 5.5e-20 101.3 104 52.9
SHI11692 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-20 101.3 101 54.5
SHI31374 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-20 101.3 101 54.5
SHI02527 Sapria himalayana HOM05D007230 ORTHO05D004756 7.2e-20 100.9 101 54.5
SHI45862 Sapria himalayana HOM05D007230 ORTHO05D004756 7.2e-20 100.9 101 53.5
SHI06223 Sapria himalayana HOM05D000002 ORTHO05D000001 9.4e-20 100.5 101 53.5
SHI32448 Sapria himalayana HOM05D000002 ORTHO05D000001 9.4e-20 100.5 101 54.5
SHI41657 Sapria himalayana HOM05D000002 ORTHO05D004756 9.4e-20 100.5 101 53.5
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 1.6e-19 99.8 101 53.5
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 2.1e-19 99.4 105 54.3
Ca_07474_v3 Cicer arietinum L. HOM05D007230 ORTHO05D004756 6.1e-19 97.8 72 66.7
Ca_20123_v3 Cicer arietinum L. HOM05D007230 ORTHO05D004756 6.1e-19 97.8 107 51.4
CSS0046673 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 8.0e-19 97.4 109 45.9
SHI11549 Sapria himalayana HOM05D000002 ORTHO05D000001 8.0e-19 97.4 101 53.5
CSS0008768 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.4e-18 96.7 109 45.9
CSS0016560 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.4e-18 96.7 109 45.9
CSS0047750 Camellia sinensis var. sinensis HOM05D010459 ORTHO05D004756 1.4e-18 96.7 109 45.9
SHI20212 Sapria himalayana HOM05D000002 ORTHO05D000001 8.8e-18 94.0 97 53.6
SHI36442 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-17 93.6 101 53.5
SHI35844 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-17 93.2 101 52.5
Ca_07147_v3 Cicer arietinum L. HOM05D000002 ORTHO05D004756 7.5e-17 90.9 112 45.5
COL.COLO4_20910 Corchorus olitorius HOM05D000002 ORTHO05D004756 6.3e-16 87.8 97 41.2
COL.COLO4_28935 Corchorus olitorius HOM05D007230 ORTHO05D004756 6.3e-16 87.8 97 43.3
CSS0005225 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.0e-15 84.3 101 43.6
TPR.G24908 Trifolium pratense HOM05D000030 ORTHO05D000031 1.5e-12 76.6 79 57.0
SHI03218 Sapria himalayana HOM05D007230 ORTHO05D004756 3.2e-12 75.5 74 51.4
Phvul.007G092900 Phaseolus vulgaris HOM05D010459 ORTHO05D004756 7.2e-12 74.3 95 44.2
CSS0040816 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.4e-12 73.9 115 36.5
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 1.2e-11 73.6 87 43.7
PSO754G0013 Papaver somniferum HOM05D007230 ORTHO05D004756 2.1e-11 72.8 91 46.2
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 4.7e-11 71.6 86 50.0
CSS0047076 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 6.1e-11 71.2 116 37.1
SHI02490 Sapria himalayana HOM05D000002 ORTHO05D000001 8.0e-11 70.9 42 76.2
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 8.0e-11 70.9 42 76.2
CSS0043144 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 1.8e-10 69.7 111 35.1
CSS0050399 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 2.6e-09 65.9 108 36.1
SHI26640 Sapria himalayana HOM05D007230 ORTHO05D004756 1.3e-08 63.5 42 69.0
Medtr5g075690 Medicago truncatula HOM05D004391 ORTHO05D005193 2.8e-08 62.4 60 58.3
Ca_02897_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.9e-08 61.6 107 39.3
Ca_03884_v3 Cicer arietinum L. HOM05D007908 ORTHO05D009653 6.3e-08 61.2 93 36.6
CSS0020284 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-07 60.1 94 36.2
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 1.4e-07 60.1 101 36.6
Sopen01g028400 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 101 30.7
Sopen03g010750 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 101 30.7
Sopen03g019360 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 101 30.7
Sopen03g035670 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 101 30.7
Sopen03g036790 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 101 30.7
Sopen04g035240 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 101 30.7
Sopen05g015480 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 101 30.7
Sopen07g007680 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 101 30.7
Sopen07g017900 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 101 30.7
Sopen09g019320 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 101 30.7
Sopen09g031250 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 101 30.7
Sopen10g012180 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 101 30.7
Sopen10g017430 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 101 30.7
Sopen10g023760 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 59.7 101 30.7
Rhsim13G0148200 Rhododendron simsii HOM05D007908 ORTHO05D009653 3.1e-07 58.9 93 38.7
RhsimUnG0157400 Rhododendron simsii HOM05D007908 ORTHO05D009653 3.1e-07 58.9 93 38.7
Nn2g14544 Nelumbo nucifera HOM05D007908 ORTHO05D009653 4.1e-07 58.5 92 37.0
RhsimUnG0057000 Rhododendron simsii HOM05D007908 ORTHO05D009653 4.1e-07 58.5 88 40.9
Sopen03g005100 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-07 58.5 101 30.7
Sopen03g005190 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-07 58.5 101 30.7
Sopen03g013160 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-07 58.5 101 30.7
Sopen03g020330 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-07 58.5 101 30.7
Sopen04g030970 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-07 58.5 101 30.7
Sopen06g024970 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-07 58.5 101 30.7
Sopen06g027290 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-07 58.5 101 30.7
Sopen07g015600 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-07 58.5 98 31.6
Sopen07g025420 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-07 58.5 101 30.7
Sopen10g006220 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-07 58.5 101 30.7
Cc04_g14940 Coffea canephora HOM05D000002 ORTHO05D000001 5.4e-07 58.2 119 31.9
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 5.4e-07 58.2 91 35.2
TPR.G34217 Trifolium pratense HOM05D007908 ORTHO05D009653 5.4e-07 58.2 87 37.9
CSS0047175 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-06 57.0 94 35.1
CSS0049897 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.2e-06 57.0 55 49.1
CSS0050464 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.2e-06 57.0 55 49.1
PSO063G0989 Papaver somniferum HOM05D007230 ORTHO05D004756 1.2e-06 57.0 106 34.9
PSO170G3518 Papaver somniferum HOM05D007230 ORTHO05D004756 1.2e-06 57.0 44 54.5
Rhsim11G0068500 Rhododendron simsii HOM05D007230 ORTHO05D004756 1.2e-06 57.0 92 34.8
CSS0034688 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 1.6e-06 56.6 61 50.8
Hma1.2p1_0303F.1_g118800 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 1.6e-06 56.6 93 36.6
Hma1.2p1_1137F.1_g260710 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 2.0e-06 56.2 93 36.6
Psat7g056280 Pisum sativum HOM05D007230 ORTHO05D004756 2.0e-06 56.2 94 31.9
Sopen11g024550 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-06 56.2 101 29.7
CSS0002158 Camellia sinensis var. sinensis HOM05D007230 ORTHO05D004756 2.7e-06 55.8 55 47.3
Psat1g072080 Pisum sativum HOM05D007230 ORTHO05D004756 2.7e-06 55.8 94 31.9
Rhsim05G0013600 Rhododendron simsii HOM05D007908 ORTHO05D009653 2.7e-06 55.8 93 37.6
Sopen01g012120 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-06 55.8 101 28.7
CSS0040737 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.5e-06 55.5 39 64.1
PSO063G3207 Papaver somniferum HOM05D007908 ORTHO05D009653 3.5e-06 55.5 91 35.2
PSO144G0017 Papaver somniferum HOM05D007230 ORTHO05D004756 3.5e-06 55.5 94 36.2
Rhsim04G0054200 Rhododendron simsii HOM05D007230 ORTHO05D004756 3.5e-06 55.5 99 34.3
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 4.5e-06 55.1 78 33.3
Rhsim01G0194900 Rhododendron simsii HOM05D007230 ORTHO05D004756 4.5e-06 55.1 93 36.6
CSS0046298 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004756 5.9e-06 54.7 95 33.7
MD02G1156200 Malus domestica HOM05D000002 ORTHO05D004756 5.9e-06 54.7 41 58.5
PSO210G6349 Papaver somniferum HOM05D007908 ORTHO05D009653 5.9e-06 54.7 90 35.6
PSO339G2863 Papaver somniferum HOM05D007908 ORTHO05D009653 5.9e-06 54.7 90 35.6
Rhsim07G0087400 Rhododendron simsii HOM05D007230 ORTHO05D004756 5.9e-06 54.7 92 34.8
PSO210G6560 Papaver somniferum HOM05D007908 ORTHO05D009653 7.7e-06 54.3 90 35.6
Psat0ss2585g0560 Pisum sativum HOM05D007230 ORTHO05D004756 7.7e-06 54.3 94 30.9
Sopen02g009760 Solanum pennellii HOM05D000002 ORTHO05D001218 7.7e-06 54.3 101 28.7


User provided reference genes

Program Settings