Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g156960 Pisum sativum HOM05D008018 ORTHO05D001531 1.1e-43 179.5 85 100.0
Psat6g154160 Pisum sativum HOM05D008018 ORTHO05D001531 1.5e-40 169.1 85 92.9
Psat6g154080 Pisum sativum HOM05D008018 ORTHO05D001531 1.1e-38 162.9 85 88.2
Psat6g154200 Pisum sativum HOM05D008018 ORTHO05D001531 1.4e-38 162.5 85 88.2
Psat6g157040 Pisum sativum HOM05D008018 ORTHO05D001531 2.6e-37 158.3 85 85.9
Medtr0187s0020 Medicago truncatula HOM05D008018 ORTHO05D001531 3.2e-35 151.4 85 84.7
Medtr1g084840 Medicago truncatula HOM05D008018 ORTHO05D001531 4.2e-35 151.0 85 85.9
Psat6g154120 Pisum sativum HOM05D008018 ORTHO05D001531 3.5e-34 147.9 74 91.9
Medtr1g484990 Medicago truncatula HOM05D008018 ORTHO05D001531 1.0e-33 146.4 81 84.0
Medtr0187s0050 Medicago truncatula HOM05D008018 ORTHO05D001531 3.0e-33 144.8 83 80.7
Medtr0187s0070 Medicago truncatula HOM05D008018 ORTHO05D001531 3.0e-33 144.8 83 80.7
Medtr1g485020 Medicago truncatula HOM05D008018 ORTHO05D001531 3.0e-33 144.8 84 83.3
TPR.G2624 Trifolium pratense HOM05D008018 ORTHO05D001531 4.8e-31 137.5 84 79.8
Ca_10206_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 8.1e-31 136.7 85 78.8
TPR.G18867 Trifolium pratense HOM05D008018 ORTHO05D001531 9.0e-30 133.3 82 76.8
Medtr1g084920 Medicago truncatula HOM05D008018 ORTHO05D001531 1.2e-29 132.9 85 80.0
TPR.G2630 Trifolium pratense HOM05D008018 ORTHO05D001531 1.4e-27 125.9 83 74.7
Glyma.10G143000 Glycine max HOM05D008018 ORTHO05D001531 1.0e-25 119.8 85 71.8
Glyma.10G143200 Glycine max HOM05D008018 ORTHO05D001531 5.1e-25 117.5 83 72.3
Phvul.007G205400 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 5.6e-24 114.0 82 72.0
Phvul.007G205600 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 5.6e-24 114.0 82 72.0
Glyma.10G143100 Glycine max HOM05D008018 ORTHO05D001531 2.8e-23 111.7 85 69.4
Glyma.20G091800 Glycine max HOM05D008018 ORTHO05D001531 8.2e-23 110.2 85 69.4
Phvul.007G205300 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.4e-22 109.4 81 67.9
Glyma.20G091600 Glycine max HOM05D008018 ORTHO05D001531 2.4e-22 108.6 85 68.2
Glyma.20G091700 Glycine max HOM05D008018 ORTHO05D001531 2.0e-21 105.5 82 68.3
Lj5g0000373 Lotus japonicus HOM05D008018 ORTHO05D001531 4.5e-21 104.4 82 64.6
Lj5g0007331 Lotus japonicus HOM05D008018 ORTHO05D001531 4.5e-21 104.4 82 64.6
Lalb_Chr21g0310041 Lupinus albus HOM05D008018 ORTHO05D001531 5.8e-21 104.0 83 61.4
TPR.G17727 Trifolium pratense HOM05D008018 ORTHO05D001531 1.3e-20 102.8 82 64.6
VMungo0720G1916 Vigna mungo HOM05D008018 ORTHO05D001531 2.5e-19 98.6 72 70.8
Lalb_Chr02g0147521 Lupinus albus HOM05D008018 ORTHO05D001531 4.6e-18 94.4 82 54.9
Lalb_Chr06g0167281 Lupinus albus HOM05D008018 ORTHO05D001531 3.9e-17 91.3 83 54.2
Psat3g015160 Pisum sativum HOM05D008018 ORTHO05D001531 6.7e-17 90.5 85 61.2
Ca_10202_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 8.7e-17 90.1 79 53.2
Ca_10203_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 8.7e-17 90.1 79 53.2
Ca_10204_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.9e-16 89.0 82 52.4
Glyma.03G228000 Glycine max HOM05D008018 ORTHO05D001531 1.3e-15 86.3 86 55.8
arahy.Tifrunner.gnm1.ann1.RMBA11 Arachis hypogaea HOM05D008018 ORTHO05D001531 1.6e-15 85.9 82 53.7
arahy.Tifrunner.gnm1.ann1.1WI4WZ Arachis hypogaea HOM05D008018 ORTHO05D001531 2.2e-15 85.5 82 53.7
Glyma.20G091900 Glycine max HOM05D008018 ORTHO05D001531 2.8e-15 85.1 82 56.1
Psat6g153800 Pisum sativum HOM05D008018 ORTHO05D001531 4.8e-15 84.3 87 49.4
Lalb_Chr02g0147531 Lupinus albus HOM05D008018 ORTHO05D001531 6.3e-15 84.0 74 56.8
Glyma.19G225200 Glycine max HOM05D008018 ORTHO05D001531 1.1e-14 83.2 86 54.7
Phvul.007G205200 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 1.1e-14 83.2 81 56.8
Lj1g0006603 Lotus japonicus HOM05D008018 ORTHO05D001531 2.4e-14 82.0 84 56.0
Lj5g0006453 Lotus japonicus HOM05D008018 ORTHO05D001531 4.1e-14 81.3 82 53.7
Lj5g0009947 Lotus japonicus HOM05D008018 ORTHO05D001531 4.1e-14 81.3 82 53.7
Phvul.001G221900 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 5.3e-14 80.9 86 53.5
Medtr0187s0030 Medicago truncatula HOM05D008018 ORTHO05D001531 9.0e-14 80.1 82 50.0
Medtr0187s0060 Medicago truncatula HOM05D008018 ORTHO05D001531 9.0e-14 80.1 82 50.0
Psat2g102520 Pisum sativum HOM05D008018 ORTHO05D001531 9.0e-14 80.1 88 53.4
Psat6g154040 Pisum sativum HOM05D008018 ORTHO05D001531 9.0e-14 80.1 81 50.6
Ca_10205_v3 Cicer arietinum L. HOM05D008018 ORTHO05D001531 1.5e-13 79.3 83 45.8
Glyma.10G143300 Glycine max HOM05D008018 ORTHO05D001531 1.5e-13 79.3 83 54.2
Psat6g154000 Pisum sativum HOM05D008018 ORTHO05D001531 2.6e-13 78.6 83 48.2
Psat2g102400 Pisum sativum HOM05D008018 ORTHO05D001531 5.9e-13 77.4 83 48.2
Psat2g102480 Pisum sativum HOM05D008018 ORTHO05D001531 5.9e-13 77.4 83 48.2
Lalb_Chr06g0167291 Lupinus albus HOM05D008018 ORTHO05D001531 1.0e-12 76.6 80 55.0
Lalb_Chr21g0310051 Lupinus albus HOM05D008018 ORTHO05D001531 1.0e-12 76.6 73 57.5
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 2.2e-12 75.5 79 59.5
Psat2g102440 Pisum sativum HOM05D008018 ORTHO05D001531 2.2e-12 75.5 83 47.0
Medtr7g111500 Medicago truncatula HOM05D008018 ORTHO05D001531 6.5e-12 73.9 82 52.4
Psat6g155760 Pisum sativum HOM05D008018 ORTHO05D001531 8.5e-12 73.6 84 50.0
Psat6g153880 Pisum sativum HOM05D008018 ORTHO05D001531 1.1e-11 73.2 84 46.4
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 1.0e-09 66.6 82 50.0
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 1.0e-09 66.6 82 50.0
Sed0022046 Sechium edule HOM05D002165 ORTHO05D001531 1.0e-09 66.6 87 47.1
Ciclev10013801m.g Citrus clementina HOM05D002165 ORTHO05D001531 1.4e-09 66.2 83 47.0
CsaV3_6G002670 Cucumis sativus L. HOM05D002165 ORTHO05D001531 2.3e-09 65.5 84 48.8
Sed0009609 Sechium edule HOM05D002165 ORTHO05D001531 2.3e-09 65.5 78 47.4
Medtr1g084830 Medicago truncatula HOM05D008018 ORTHO05D001531 3.0e-09 65.1 85 44.7
Medtr1g484970 Medicago truncatula HOM05D008018 ORTHO05D001531 3.0e-09 65.1 85 44.7
Medtr1g485000 Medicago truncatula HOM05D008018 ORTHO05D001531 3.0e-09 65.1 85 44.7
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 3.9e-09 64.7 82 47.6
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 5.1e-09 64.3 79 51.9
Ciclev10013684m.g Citrus clementina HOM05D002165 ORTHO05D001531 8.8e-09 63.5 78 46.2
Sed0005500 Sechium edule HOM05D002165 ORTHO05D001531 1.1e-08 63.2 89 44.9
MELO3C025017.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.5e-08 62.8 84 46.4
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 2.5e-08 62.0 77 48.1
arahy.Tifrunner.gnm1.ann1.NUY1UV Arachis hypogaea HOM05D008018 ORTHO05D001531 3.3e-08 61.6 72 50.0
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.3e-08 61.6 89 47.2
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.3e-08 61.6 89 47.2
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.3e-08 61.6 89 47.2
PSO761G0534 Papaver somniferum HOM05D002165 ORTHO05D001531 3.3e-08 61.6 90 44.4
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 3.3e-08 61.6 77 49.4
TAR633G1086 Trochodendron aralioides HOM05D002165 ORTHO05D001531 3.3e-08 61.6 79 46.8
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 4.3e-08 61.2 84 48.8
arahy.Tifrunner.gnm1.ann1.R57IYC Arachis hypogaea HOM05D008018 ORTHO05D001531 4.3e-08 61.2 76 48.7
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 5.7e-08 60.8 82 45.1
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 5.7e-08 60.8 91 47.3
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 7.4e-08 60.5 89 47.2
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 9.7e-08 60.1 84 42.9
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 9.7e-08 60.1 84 42.9
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 9.7e-08 60.1 84 42.9
GSVIVG01017707001 Vitis vinifera HOM05D002165 ORTHO05D001531 9.7e-08 60.1 82 47.6
CSS0027376 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 1.3e-07 59.7 68 48.5
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 1.3e-07 59.7 71 49.3
MELO3C025020.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.7e-07 59.3 85 44.7
Lalb_Chr11g0073701 Lupinus albus HOM05D002165 ORTHO05D001531 1.7e-07 59.3 67 49.3
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 1.7e-07 59.3 86 41.9
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 2.2e-07 58.9 89 46.1
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 2.2e-07 58.9 89 46.1
PGR083G0845 Punica granatum HOM05D002165 ORTHO05D001531 2.2e-07 58.9 89 48.3
CsaV3_6G002640 Cucumis sativus L. HOM05D002165 ORTHO05D001531 2.8e-07 58.5 85 42.4
Medtr0187s0080 Medicago truncatula HOM05D008018 ORTHO05D001531 2.8e-07 58.5 45 55.6
Medtr1g084900 Medicago truncatula HOM05D008018 ORTHO05D001531 2.8e-07 58.5 45 55.6
TWI12G1307 Tripterygium wilfordii HOM05D002165 ORTHO05D001531 2.8e-07 58.5 89 49.4
Aqoxy2G02476 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 4.8e-07 57.8 80 48.8
Ca_02322_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 8.2e-07 57.0 72 48.6
Ca_30364_v3 Cicer arietinum L. HOM05D002165 ORTHO05D001531 8.2e-07 57.0 72 48.6
Eucgr.H01321 Eucalyptus grandis HOM05D002165 ORTHO05D001531 8.2e-07 57.0 79 49.4
CARHR080310 Cardamine hirsuta HOM05D002165 ORTHO05D001531 1.1e-06 56.6 87 44.8
MELO3C025018.2 Cucumis melo HOM05D002165 ORTHO05D001531 1.1e-06 56.6 83 44.6
Aa31LG5G16230 Aethionema arabicum HOM05D002165 ORTHO05D001531 1.4e-06 56.2 88 43.2
Glyma.09G080700 Glycine max HOM05D002165 ORTHO05D001531 1.8e-06 55.8 72 47.2
Glyma.15G185700 Glycine max HOM05D002165 ORTHO05D001531 1.8e-06 55.8 72 47.2
Lj6g0008561 Lotus japonicus HOM05D002165 ORTHO05D001531 1.8e-06 55.8 72 47.2
GSVIVG01017705001 Vitis vinifera HOM05D002165 ORTHO05D001531 1.8e-06 55.8 88 46.6
GSVIVG01017706001 Vitis vinifera HOM05D002165 ORTHO05D001531 1.8e-06 55.8 88 46.6
BcaNung03681 Brassica carinata HOM05D002165 ORTHO05D001531 2.4e-06 55.5 85 45.9
BcaNung03907 Brassica carinata HOM05D002165 ORTHO05D001531 2.4e-06 55.5 87 44.8
A06p36950 Brassica napus HOM05D002165 ORTHO05D001531 2.4e-06 55.5 87 44.8
C07p41550 Brassica napus HOM05D002165 ORTHO05D001531 2.4e-06 55.5 85 45.9
BolC7t44687H Brassica oleracea HOM05D002165 ORTHO05D001531 2.4e-06 55.5 85 45.9
BraA06t26620Z Brassica rapa HOM05D002165 ORTHO05D001531 2.4e-06 55.5 87 44.8
CsaV3_6G002630 Cucumis sativus L. HOM05D002165 ORTHO05D001531 2.4e-06 55.5 83 42.2
Glyma.13G117400 Glycine max HOM05D002165 ORTHO05D001531 2.4e-06 55.5 78 47.4
MD04G1186400 Malus domestica HOM05D002165 ORTHO05D001531 2.4e-06 55.5 79 48.1
Phvul.001G221800 Phaseolus vulgaris HOM05D008018 ORTHO05D001531 2.4e-06 55.5 72 45.8
CSS0028703 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 3.1e-06 55.1 58 56.9
MELO3C015240.2 Cucumis melo HOM05D002165 ORTHO05D001531 3.1e-06 55.1 87 41.4
Sed0026735 Sechium edule HOM05D002165 ORTHO05D001531 3.1e-06 55.1 78 41.0
TPR.G29235 Trifolium pratense HOM05D002165 ORTHO05D001531 3.1e-06 55.1 71 45.1
CsaV3_6G002650 Cucumis sativus L. HOM05D002165 ORTHO05D001531 4.1e-06 54.7 83 42.2
Glyma.17G042500 Glycine max HOM05D002165 ORTHO05D001531 5.3e-06 54.3 75 49.3
Lalb_Chr07g0181571 Lupinus albus HOM05D002165 ORTHO05D001531 5.3e-06 54.3 77 44.2
Sed0002745 Sechium edule HOM05D002165 ORTHO05D001531 5.3e-06 54.3 71 40.8
Sed0011742 Sechium edule HOM05D002165 ORTHO05D001531 5.3e-06 54.3 81 39.5
Sed0018337 Sechium edule HOM05D002165 ORTHO05D001531 5.3e-06 54.3 68 44.1
CsaV3_1G038050 Cucumis sativus L. HOM05D002165 ORTHO05D001531 6.9e-06 53.9 86 41.9
Phvul.003G124200 Phaseolus vulgaris HOM05D002165 ORTHO05D001531 6.9e-06 53.9 75 48.0
GSVIVG01017704001 Vitis vinifera HOM05D002165 ORTHO05D001531 6.9e-06 53.9 82 48.8
VMungo1383G2747 Vigna mungo HOM05D008018 ORTHO05D001531 9.1e-06 53.5 71 47.9


User provided reference genes

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