Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 0.0e+00 1671.4 867 100.0
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 0.0e+00 1305.4 881 79.3
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 0.0e+00 1218.0 870 74.9
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 0.0e+00 1145.2 971 66.4
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 1.7e-293 1012.7 878 64.7
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 4.8e-280 968.0 888 61.4
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 3.6e-275 951.8 891 61.4
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 1.7e-261 906.4 899 60.0
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 5.6e-252 874.8 885 58.9
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 3.6e-251 872.1 898 58.7
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 9.2e-247 857.4 870 58.5
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 4.3e-127 459.9 1069 34.0
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 1.7e-123 448.0 784 38.6
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 1.6e-121 441.4 1066 34.4
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 6.9e-101 372.9 902 34.0
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 4.5e-100 370.2 957 32.4
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 9.9e-100 369.0 976 33.1
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 1.3e-99 368.6 1079 31.7
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 8.4e-99 365.9 586 41.8
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 6.7e-96 356.3 722 36.7
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 8.7e-96 355.9 601 38.3
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 1.1e-95 355.5 816 34.2
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 5.6e-95 353.2 586 40.6
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 8.1e-94 349.4 976 31.9
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.4e-93 348.6 976 32.0
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 3.1e-93 347.4 983 32.7
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 6.9e-93 346.3 735 35.0
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.5e-92 345.1 918 32.5
Psat7g077840 Pisum sativum HOM05D006048 ORTHO05D007642 7.6e-92 342.8 177 94.9
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 2.2e-91 341.3 581 39.2
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 9.3e-90 335.9 978 30.8
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.6e-89 335.1 688 35.5
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 2.1e-89 334.7 981 31.8
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.7e-89 334.3 1024 30.9
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 7.9e-89 332.8 983 31.8
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 1.8e-88 331.6 600 37.0
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 3.0e-88 330.9 997 31.8
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 3.9e-88 330.5 795 33.3
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 1.9e-87 328.2 826 33.4
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 2.5e-87 327.8 982 31.8
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 2.8e-86 324.3 689 35.4
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 1.1e-85 322.4 1038 29.9
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 2.4e-85 321.2 996 30.3
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 4.1e-85 320.5 585 37.3
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 1.3e-83 315.5 981 30.6
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 1.9e-82 311.6 997 30.8
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 2.1e-81 308.1 743 33.6
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 1.3e-80 305.4 744 33.6
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 2.3e-80 304.7 914 32.8
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 8.7e-80 302.8 1044 29.8
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 1.9e-79 301.6 765 32.9
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 3.7e-78 297.4 519 39.3
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 1.2e-76 292.4 884 29.4
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 5.9e-76 290.0 696 33.9
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 3.2e-74 284.3 804 30.0
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 1.8e-72 278.5 949 28.7
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 3.3e-71 274.2 720 31.0
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 1.3e-70 272.3 484 37.6
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 1.2e-68 265.8 869 31.2
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 1.2e-68 265.8 372 40.6
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 2.6e-68 264.6 744 30.8
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 1.0e-67 262.7 936 28.3
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 5.0e-67 260.4 916 28.2
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 6.5e-67 260.0 951 28.5
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 1.1e-66 259.2 841 29.0
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 4.2e-66 257.3 524 33.8
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 1.6e-65 255.4 593 31.2
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 4.7e-65 253.8 590 32.9
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 7.9e-65 253.1 902 28.3
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 3.9e-64 250.8 895 28.3
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 2.6e-63 248.1 665 30.7
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 4.4e-63 247.3 1040 26.2
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 4.4e-63 247.3 542 31.4
Psat3g054600 Pisum sativum HOM05D006048 ORTHO05D007642 4.4e-63 247.3 148 87.8
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 1.3e-62 245.7 844 29.4
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 2.8e-62 244.6 585 33.0
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 2.0e-60 238.4 919 28.2
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 2.0e-60 238.4 922 28.4
CiPaw.07G016800 Carya illinoinensis HOM05D006048 ORTHO05D007642 2.0e-60 238.4 864 29.4
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 1.7e-59 235.3 616 29.7
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 2.2e-59 235.0 892 28.6
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 2.2e-59 235.0 876 28.3
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 2.2e-59 235.0 820 28.4
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 2.9e-59 234.6 587 30.0
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 6.5e-59 233.4 858 28.1
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 1.5e-58 232.3 489 32.9
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 4.2e-58 230.7 925 28.2
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 1.2e-57 229.2 908 27.9
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 1.6e-57 228.8 932 28.0
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 1.6e-57 228.8 856 28.2
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 1.0e-56 226.1 734 28.5
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 1.8e-56 225.3 826 28.0
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 1.8e-56 225.3 830 27.5
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 2.6e-55 221.5 619 30.7
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 5.7e-55 220.3 918 27.2
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 2.0e-52 211.8 434 33.6
vmacro05021 Vaccinium macrocarpon HOM05D006048 ORTHO05D007642 2.7e-52 211.5 817 27.7
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 3.8e-51 207.6 435 34.0
ATR0626G180 Amborella trichopoda HOM05D006048 ORTHO05D007642 1.7e-43 182.2 346 34.4
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 8.5e-43 179.9 901 26.3
Atru.chr2.428 Acer truncatum HOM05D006048 ORTHO05D007642 6.1e-41 173.7 147 52.4
CDE05G2441 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 2.6e-39 168.3 345 32.8
Atru.chr2.429 Acer truncatum HOM05D006048 ORTHO05D007642 6.1e-33 147.1 193 44.0
Os11g0148400 Oryza sativa ssp. japonica HOM05D006048 ORTHO05D007642 1.4e-32 146.0 532 27.8
Manes.08G121600 Manihot esculenta HOM05D006048 ORTHO05D007642 3.0e-32 144.8 716 27.0
CDE05G0200 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 1.4e-29 136.0 238 37.8
HPP92_011281 Vanilla planifolia HOM05D006048 ORTHO05D007642 1.1e-26 126.3 355 28.7
HPP92_011303 Vanilla planifolia HOM05D006048 ORTHO05D007642 1.5e-26 125.9 353 28.9
SEGI_14627 Sequoiadendron giganteum HOM05D006048 ORTHO05D007642 1.2e-25 122.9 489 26.2
MBI19_g40207_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 2.2e-22 112.1 318 29.6
Lj9A29T9 Lonicera japonica HOM05D006048 ORTHO05D007642 1.2e-20 106.3 339 31.0
Lj9A18T10 Lonicera japonica HOM05D006048 ORTHO05D007642 1.3e-19 102.8 339 30.7
Psat4g159320 Pisum sativum HOM05D000515 ORTHO05D001911 1.6e-17 95.9 63 85.7
Mapoly0011s0030 Marchantia polymorpha HOM05D006048 ORTHO05D007642 3.4e-15 88.2 222 27.9
Psat5g154640 Pisum sativum HOM05D000515 ORTHO05D020117 2.4e-13 82.0 44 93.2
AagrBONN_evm.TU.Sc2ySwM_344.3982 Anthoceros agrestis HOM05D006048 ORTHO05D007642 9.2e-13 80.1 631 23.5
CiPaw.08G165600 Carya illinoinensis HOM05D006048 ORTHO05D007642 1.1e-10 73.2 563 27.2
Actinidia01443 Actinidia chinensis HOM05D006048 ORTHO05D007642 2.1e-09 68.9 128 39.1
MBI12_g31451_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 3.1e-08 65.1 108 39.8
Psat4g159280 Pisum sativum HOM05D000515 ORTHO05D020117 8.4e-06 57.0 34 91.2


User provided reference genes

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