Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g147760 Pisum sativum HOM05D004408 ORTHO05D005486 1.2e-58 229.6 113 100.0
Psat6g147640 Pisum sativum HOM05D004408 ORTHO05D005486 1.3e-15 86.7 186 39.2
Medtr1g081710 Medicago truncatula HOM05D004408 ORTHO05D005486 3.7e-15 85.1 186 38.7
Ca_10066_v3 Cicer arietinum L. HOM05D004408 ORTHO05D005486 1.4e-14 83.2 186 38.2
VMungo0720G1928 Vigna mungo HOM05D004408 ORTHO05D005486 1.9e-14 82.8 186 37.6
arahy.Tifrunner.gnm1.ann1.4PM453 Arachis hypogaea HOM05D004408 ORTHO05D005486 2.4e-14 82.4 186 37.6
Glyma.10G159500 Glycine max HOM05D004408 ORTHO05D005486 3.2e-14 82.0 186 37.6
TPR.G11136 Trifolium pratense HOM05D004408 ORTHO05D005486 3.2e-14 82.0 186 38.2
Phvul.007G184950 Phaseolus vulgaris HOM05D004408 ORTHO05D005486 1.6e-13 79.7 186 37.1
Glyma.20G229100 Glycine max HOM05D004408 ORTHO05D005486 2.7e-13 79.0 186 37.1
Lj5g0005673 Lotus japonicus HOM05D004408 ORTHO05D005486 3.5e-13 78.6 186 36.6
TWI56G0724 Tripterygium wilfordii HOM05D004408 ORTHO05D005486 5.0e-12 74.7 185 35.7
CSS0006895 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 6.6e-12 74.3 185 36.2
CSS0009913 Camellia sinensis var. sinensis HOM05D004408 ORTHO05D005486 6.6e-12 74.3 185 36.2
Lalb_Chr21g0310861 Lupinus albus HOM05D004408 ORTHO05D005486 1.1e-11 73.6 186 35.5
Lalb_Chr06g0167911 Lupinus albus HOM05D004408 ORTHO05D005486 3.3e-11 72.0 186 34.9
Eucgr.B01725 Eucalyptus grandis HOM05D004408 ORTHO05D005486 4.3e-11 71.6 188 34.6
arahy.Tifrunner.gnm1.ann1.6Q424B Arachis hypogaea HOM05D004408 ORTHO05D005486 7.3e-11 70.9 94 52.1
PGR083G2727 Punica granatum HOM05D004408 ORTHO05D005486 7.3e-11 70.9 186 36.0
Solyc09g018340.2 Solanum lycopersicum HOM05D004408 ORTHO05D005486 9.5e-11 70.5 172 34.9
Sopen09g011530 Solanum pennellii HOM05D004408 ORTHO05D005486 9.5e-11 70.5 172 34.9
GSVIVG01021873001 Vitis vinifera HOM05D004408 ORTHO05D005486 9.5e-11 70.5 185 35.1
Nitab4.5_0000162g0020 Nicotiana tabacum HOM05D004408 ORTHO05D005486 1.2e-10 70.1 156 37.8
EL10Ac4g09198 Beta vulgaris HOM05D004408 ORTHO05D005486 2.1e-10 69.3 186 34.4
Manes.09G157400 Manihot esculenta HOM05D004408 ORTHO05D005486 3.6e-10 68.6 184 34.8
MELO3C015391.2 Cucumis melo HOM05D004408 ORTHO05D005486 8.1e-10 67.4 186 33.9
CsaV3_1G039670 Cucumis sativus L. HOM05D004408 ORTHO05D005486 8.1e-10 67.4 186 33.9
DCAR_001927 Daucus carota HOM05D004408 ORTHO05D005486 1.1e-09 67.0 173 32.9
Peaxi162Scf01827g00009 Petunia axillaris HOM05D004408 ORTHO05D005486 1.1e-09 67.0 172 34.3
SalBow8G3789 Salvia bowleyana HOM05D004408 ORTHO05D005486 1.1e-09 67.0 173 32.9
TAR365G0706 Trochodendron aralioides HOM05D004408 ORTHO05D005486 1.4e-09 66.6 184 34.2
Migut.B01071 Erythranthe guttata HOM05D004408 ORTHO05D005486 1.8e-09 66.2 173 32.9
Nitab4.5_0000921g0020 Nicotiana tabacum HOM05D004408 ORTHO05D005486 1.8e-09 66.2 172 34.3
Nn1g02333 Nelumbo nucifera HOM05D004408 ORTHO05D005486 2.3e-09 65.9 184 34.8
CANSAT54G0296 Cannabis sativa HOM05D004408 ORTHO05D005486 3.1e-09 65.5 185 32.4
ClCG03G016280 Citrullus lanatus HOM05D004408 ORTHO05D005486 4.0e-09 65.1 186 32.8
ECA232G0933 Erigeron canadensis HOM05D004408 ORTHO05D005486 5.2e-09 64.7 185 33.5
MD04G1218000 Malus domestica HOM05D004408 ORTHO05D005486 5.2e-09 64.7 185 33.5
CAN.G167.11 Capsicum annuum HOM05D004408 ORTHO05D005486 6.8e-09 64.3 172 33.1
Duzib177G0039 Durio zibethinus HOM05D004408 ORTHO05D005486 6.8e-09 64.3 184 34.2
Rhsim05G0150300 Rhododendron simsii HOM05D004408 ORTHO05D005486 8.9e-09 63.9 197 32.5
AUR62005003 Chenopodium quinoa HOM05D004408 ORTHO05D005486 1.2e-08 63.5 186 33.3
Potri.013G035100 Populus trichocarpa HOM05D004408 ORTHO05D005486 1.2e-08 63.5 185 33.5
Ciclev10000022m.g Citrus clementina HOM05D004408 ORTHO05D005486 1.5e-08 63.2 172 33.1
PSO210G7697 Papaver somniferum HOM05D004408 ORTHO05D005486 1.5e-08 63.2 187 32.6
PSO761G0213 Papaver somniferum HOM05D004408 ORTHO05D005486 1.5e-08 63.2 187 32.6
FAN02G3979 Fragaria x ananassa HOM05D004408 ORTHO05D005486 2.0e-08 62.8 184 33.2
Prupe.6G338000 Prunus persica HOM05D004408 ORTHO05D005486 2.6e-08 62.4 185 33.0
RcHm_v2.0_Chr3g0461321 Rosa chinensis HOM05D004408 ORTHO05D005486 2.6e-08 62.4 184 33.2
Sabra13G0034100 Salix brachista HOM05D004408 ORTHO05D005486 2.6e-08 62.4 185 33.5
HPP92_012131 Vanilla planifolia HOM05D004408 ORTHO05D005486 3.4e-08 62.0 182 33.5
Ah.04g162440 Amaranthus hybridus HOM05D004408 ORTHO05D005486 4.4e-08 61.6 186 32.8
Cfa006478 Carpinus fangiana HOM05D004408 ORTHO05D005486 4.4e-08 61.6 186 32.8
FvH4_6g10420 Fragaria vesca HOM05D004408 ORTHO05D005486 4.4e-08 61.6 184 33.2
FAN05G2697 Fragaria x ananassa HOM05D004408 ORTHO05D005486 4.4e-08 61.6 184 33.2
QL03p022358 Quercus lobata HOM05D004408 ORTHO05D005486 4.4e-08 61.6 41 75.6
Gorai.007G286000 Gossypium raimondii HOM05D004408 ORTHO05D005486 5.8e-08 61.2 184 34.2
Sed0014385 Sechium edule HOM05D004408 ORTHO05D005486 7.5e-08 60.8 41 73.2
MSTRG.20441 Avicennia marina HOM05D004408 ORTHO05D005486 9.9e-08 60.5 173 31.2
unitig_0.g2223 Utricularia gibba HOM05D004408 ORTHO05D005486 9.9e-08 60.5 43 67.4
Sc06g0003710 Simmondsia chinensis HOM05D004408 ORTHO05D005486 1.3e-07 60.1 187 31.6
Thecc.05G290600 Theobroma cacao HOM05D004408 ORTHO05D005486 1.3e-07 60.1 184 32.6
Gohir.A11G256300 Gossypium hirsutum HOM05D004408 ORTHO05D005486 1.7e-07 59.7 92 47.8
Gohir.D11G266000 Gossypium hirsutum HOM05D004408 ORTHO05D005486 1.7e-07 59.7 92 47.8
vmacro19680 Vaccinium macrocarpon HOM05D004408 ORTHO05D005486 1.7e-07 59.7 40 75.0
Lsat_1_v5_gn_4_142681 Lactuca sativa HOM05D004408 ORTHO05D005486 2.2e-07 59.3 173 31.8
Hund06994 Selenicereus undatus HOM05D004408 ORTHO05D005486 2.9e-07 58.9 93 44.1
Aa31LG11G8830 Aethionema arabicum HOM05D004408 ORTHO05D005486 3.7e-07 58.5 139 34.5
FAN09G0115 Fragaria x ananassa HOM05D004408 ORTHO05D005486 3.7e-07 58.5 184 32.6
Oeu060841.3 Olea europaea HOM05D004408 ORTHO05D005486 3.7e-07 58.5 54 61.1
Cc02_g31380 Coffea canephora HOM05D004408 ORTHO05D005486 4.9e-07 58.2 40 75.0
COL.COLO4_15257 Corchorus olitorius HOM05D004408 ORTHO05D005486 4.9e-07 58.2 184 32.6
HanXRQChr11g0322991 Helianthus annuus HOM05D004408 ORTHO05D005486 4.9e-07 58.2 185 31.4
ATR0697G205 Amborella trichopoda HOM05D004408 ORTHO05D005486 1.1e-06 57.0 184 31.5
Aqoxy2G03396 Aquilegia oxysepala HOM05D004408 ORTHO05D005486 1.4e-06 56.6 184 29.9
Actinidia17457 Actinidia chinensis HOM05D004408 ORTHO05D005486 3.2e-06 55.5 40 72.5
MBI05_g21270_MAGBIO Magnolia biondii HOM05D004408 ORTHO05D005486 4.1e-06 55.1 35 80.0
Zm00001eb151860 Zea mays HOM05D004408 ORTHO05D005486 4.1e-06 55.1 180 31.1


User provided reference genes

Program Settings