Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g103040 Pisum sativum HOM05D005247 ORTHO05D006571 3.7e-41 171.0 81 100.0
Glyma.17G023300 Glycine max HOM05D005247 ORTHO05D006571 6.1e-36 153.7 80 90.0
TPR.G28788 Trifolium pratense HOM05D005247 ORTHO05D006571 1.0e-35 152.9 76 93.4
Lj4g0024405 Lotus japonicus HOM05D005247 ORTHO05D006571 1.2e-34 149.4 77 89.6
Medtr3g069790 Medicago truncatula HOM05D005247 ORTHO05D006571 2.0e-34 148.7 76 90.8
Glyma.07G251000 Glycine max HOM05D005247 ORTHO05D006571 3.4e-34 147.9 77 89.6
Phvul.003G101400 Phaseolus vulgaris HOM05D005247 ORTHO05D006571 1.3e-33 146.0 76 88.2
Psat5g125320 Pisum sativum HOM05D005247 ORTHO05D006571 1.3e-33 146.0 76 89.5
arahy.Tifrunner.gnm1.ann1.8Y06GW Arachis hypogaea HOM05D005247 ORTHO05D006571 1.7e-33 145.6 78 88.5
arahy.Tifrunner.gnm1.ann1.A4UT9N Arachis hypogaea HOM05D005247 ORTHO05D006571 1.7e-33 145.6 78 88.5
TPR.G29803 Trifolium pratense HOM05D005247 ORTHO05D006571 1.7e-33 145.6 76 89.5
Ca_21545_v3 Cicer arietinum L. HOM05D005247 ORTHO05D006571 3.7e-33 144.4 76 89.5
Lalb_Chr12g0196461 Lupinus albus HOM05D005247 ORTHO05D006571 1.4e-32 142.5 76 85.5
QL06p007567 Quercus lobata HOM05D005247 ORTHO05D006571 1.8e-32 142.1 76 84.2
VMungo1215G2055 Vigna mungo HOM05D005247 ORTHO05D006571 2.4e-32 141.7 76 85.5
Dinv38319 Davidia involucrata HOM05D005247 ORTHO05D006571 5.4e-32 140.6 76 84.2
vmacro08197 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 1.2e-31 139.4 76 81.6
Actinidia23422 Actinidia chinensis HOM05D005247 ORTHO05D006571 3.5e-31 137.9 76 80.3
CSS0036429 Camellia sinensis var. sinensis HOM05D005247 ORTHO05D006571 1.0e-30 136.3 76 81.6
Dinv44420 Davidia involucrata HOM05D005247 ORTHO05D006571 1.3e-30 136.0 76 80.3
MD16G1174400 Malus domestica HOM05D005247 ORTHO05D006571 1.7e-30 135.6 76 81.6
ECA234G2791 Erigeron canadensis HOM05D005247 ORTHO05D006571 2.3e-30 135.2 76 80.3
Gorai.006G257600 Gossypium raimondii HOM05D005247 ORTHO05D006571 2.9e-30 134.8 77 77.9
TAR633G1275 Trochodendron aralioides HOM05D005247 ORTHO05D006571 2.9e-30 134.8 76 76.3
COL.COLO4_13921 Corchorus olitorius HOM05D005247 ORTHO05D006571 3.8e-30 134.4 77 76.6
Hma1.2p1_0078F.1_g040780 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 3.8e-30 134.4 76 78.9
Ciclev10005079m.g Citrus clementina HOM05D005247 ORTHO05D006571 5.0e-30 134.0 77 77.9
HanXRQChr17g0562111 Helianthus annuus HOM05D005247 ORTHO05D006571 8.6e-30 133.3 76 78.9
MD13G1173000 Malus domestica HOM05D005247 ORTHO05D006571 8.6e-30 133.3 76 80.3
GSVIVG01017794001 Vitis vinifera HOM05D005247 ORTHO05D006571 1.5e-29 132.5 76 78.9
CiPaw.02G086000 Carya illinoinensis HOM05D005247 ORTHO05D006571 1.9e-29 132.1 76 73.7
Gohir.A09G233900 Gossypium hirsutum HOM05D005247 ORTHO05D006571 1.9e-29 132.1 77 76.6
TAR362G0112 Trochodendron aralioides HOM05D005247 ORTHO05D006571 1.9e-29 132.1 76 76.3
Nn7g38324 Nelumbo nucifera HOM05D005247 ORTHO05D006571 2.5e-29 131.7 76 75.0
Lsat_1_v5_gn_4_34220 Lactuca sativa HOM05D005247 ORTHO05D006571 3.3e-29 131.3 76 78.9
Duzib151G0039 Durio zibethinus HOM05D005247 ORTHO05D006571 4.3e-29 131.0 77 76.6
DCAR_024549 Daucus carota HOM05D005247 ORTHO05D006571 7.3e-29 130.2 76 76.3
PGR142G1936 Punica granatum HOM05D005247 ORTHO05D006571 9.5e-29 129.8 77 75.3
Rhsim04G0216900 Rhododendron simsii HOM05D005247 ORTHO05D006571 9.5e-29 129.8 76 76.3
Gohir.D09G234700 Gossypium hirsutum HOM05D005247 ORTHO05D006571 2.1e-28 128.6 72 79.2
Aqoxy5G00647 Aquilegia oxysepala HOM05D005247 ORTHO05D006571 3.6e-28 127.9 76 75.0
Thecc.04G278500 Theobroma cacao HOM05D005247 ORTHO05D006571 3.6e-28 127.9 75 76.0
Cfa015350 Carpinus fangiana HOM05D005247 ORTHO05D006571 8.0e-28 126.7 76 72.4
Prupe.1G141100 Prunus persica HOM05D005247 ORTHO05D006571 8.0e-28 126.7 76 73.7
RcHm_v2.0_Chr4g0421281 Rosa chinensis HOM05D005247 ORTHO05D006571 8.0e-28 126.7 77 72.7
FAN12G4219 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.4e-27 125.9 79 70.9
FvH4_4g17340 Fragaria vesca HOM05D005247 ORTHO05D006571 1.8e-27 125.6 77 72.7
FAN12G3211 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.8e-27 125.6 79 70.9
FAN07G0437 Fragaria x ananassa HOM05D005247 ORTHO05D006571 2.3e-27 125.2 77 72.7
FAN17G1560 Fragaria x ananassa HOM05D005247 ORTHO05D006571 2.3e-27 125.2 77 72.7
Lj6A670T87 Lonicera japonica HOM05D005247 ORTHO05D006571 3.0e-27 124.8 76 76.3
MSTRG.21809 Avicennia marina HOM05D005247 ORTHO05D006571 6.8e-27 123.6 76 69.7
Potri.008G205300 Populus trichocarpa HOM05D005247 ORTHO05D006571 8.9e-27 123.2 76 71.1
CANSAT78G0941 Cannabis sativa HOM05D005247 ORTHO05D006571 1.5e-26 122.5 76 71.1
Nitab4.5_0000343g0170 Nicotiana tabacum HOM05D005247 ORTHO05D006571 2.6e-26 121.7 76 72.4
BcaC05g28162 Brassica carinata HOM05D005247 ORTHO05D006571 3.4e-26 121.3 77 68.8
C05p41980 Brassica napus HOM05D005247 ORTHO05D006571 3.4e-26 121.3 77 68.8
BolC5t32932H Brassica oleracea HOM05D005247 ORTHO05D006571 3.4e-26 121.3 77 68.8
BcaB06g26247 Brassica carinata HOM05D005247 ORTHO05D006571 4.4e-26 120.9 77 68.8
A05p27200 Brassica napus HOM05D005247 ORTHO05D006571 4.4e-26 120.9 77 68.8
BraA05t21609Z Brassica rapa HOM05D005247 ORTHO05D006571 4.4e-26 120.9 77 68.8
Nitab4.5_0006478g0050 Nicotiana tabacum HOM05D005247 ORTHO05D006571 4.4e-26 120.9 76 72.4
Carub.0007s2616 Capsella rubella HOM05D005247 ORTHO05D006571 5.7e-26 120.6 77 67.5
AUR62040732 Chenopodium quinoa HOM05D005247 ORTHO05D006571 7.5e-26 120.2 77 68.8
Nitab4.5_0001357g0080 Nicotiana tabacum HOM05D005247 ORTHO05D006571 7.5e-26 120.2 76 71.1
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 9.8e-26 119.8 76 72.4
Migut.N00115 Erythranthe guttata HOM05D005247 ORTHO05D006571 9.8e-26 119.8 76 69.7
Thhalv10025397m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 9.8e-26 119.8 77 67.5
Manes.15G016200 Manihot esculenta HOM05D005247 ORTHO05D006571 9.8e-26 119.8 77 70.1
Sabra08G0156600 Salix brachista HOM05D005247 ORTHO05D006571 9.8e-26 119.8 77 67.5
Sc13g0003580 Simmondsia chinensis HOM05D005247 ORTHO05D006571 9.8e-26 119.8 77 67.5
Solyc07g041930.3 Solanum lycopersicum HOM05D005247 ORTHO05D006571 1.3e-25 119.4 76 71.1
Sopen07g021430 Solanum pennellii HOM05D005247 ORTHO05D006571 1.3e-25 119.4 76 71.1
Peaxi162Scf00127g00146 Petunia axillaris HOM05D005247 ORTHO05D006571 1.7e-25 119.0 76 72.4
THA.LOC104802559 Tarenaya hassleriana HOM05D005247 ORTHO05D006571 1.7e-25 119.0 77 67.5
AT3G21465 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 2.2e-25 118.6 77 67.5
AL3G35540 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 2.9e-25 118.2 77 67.5
AT4G15640 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 2.9e-25 118.2 77 66.2
Cpa.g.sc16.124 Carica papaya HOM05D005247 ORTHO05D006571 2.9e-25 118.2 77 66.2
AUR62043783 Chenopodium quinoa HOM05D005247 ORTHO05D006571 2.9e-25 118.2 77 67.5
MELO3C006614.2 Cucumis melo HOM05D005247 ORTHO05D006571 2.9e-25 118.2 76 69.7
Sp3g19500 Schrenkiella parvula HOM05D005247 ORTHO05D006571 2.9e-25 118.2 77 66.2
Atru.chr4.2761 Acer truncatum HOM05D005247 ORTHO05D006571 3.7e-25 117.9 76 73.7
Atru.chr4.2766 Acer truncatum HOM05D005247 ORTHO05D006571 3.7e-25 117.9 76 73.7
Hund20585 Selenicereus undatus HOM05D005247 ORTHO05D006571 4.9e-25 117.5 79 63.3
TWI09G0062 Tripterygium wilfordii HOM05D005247 ORTHO05D006571 6.4e-25 117.1 76 65.8
CARHR290040 Cardamine hirsuta HOM05D005247 ORTHO05D006571 8.3e-25 116.7 77 64.9
vmacro08194 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 8.3e-25 116.7 92 63.0
AL7G39790 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 1.1e-24 116.3 77 64.9
ClCG05G005860 Citrullus lanatus HOM05D005247 ORTHO05D006571 1.4e-24 115.9 76 67.1
Nitab4.5_0009436g0020 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.4e-24 115.9 76 68.4
BcaB04g18303 Brassica carinata HOM05D005247 ORTHO05D006571 1.8e-24 115.5 77 64.9
Sed0017520 Sechium edule HOM05D005247 ORTHO05D006571 1.8e-24 115.5 77 64.9
EL10Ac3g06569 Beta vulgaris HOM05D005247 ORTHO05D006571 4.1e-24 114.4 77 66.2
Ah.13g074520 Amaranthus hybridus HOM05D005247 ORTHO05D006571 1.2e-23 112.8 76 63.2
Sp7g13890 Schrenkiella parvula HOM05D005247 ORTHO05D006571 1.2e-23 112.8 77 63.6
SGA_v2.0_scaffold89G27537 Striga asiatica HOM05D005247 ORTHO05D006571 1.2e-23 112.8 76 65.8
Carub.0003s2149 Capsella rubella HOM05D005247 ORTHO05D006571 1.6e-23 112.5 83 62.7
BolC8t48291H Brassica oleracea HOM05D005247 ORTHO05D006571 2.0e-23 112.1 77 64.9
Cc03_g02260 Coffea canephora HOM05D005247 ORTHO05D006571 2.7e-23 111.7 77 64.9
Os07g0668200 Oryza sativa ssp. japonica HOM05D005247 ORTHO05D006571 4.6e-23 110.9 76 64.5
CsaV3_3G014210 Cucumis sativus L. HOM05D005247 ORTHO05D006571 5.9e-23 110.5 76 65.8
PSO541G1846 Papaver somniferum HOM05D005247 ORTHO05D006571 1.0e-22 109.8 76 61.8
Zm00001eb330100 Zea mays HOM05D005247 ORTHO05D006571 1.0e-22 109.8 76 64.5
Eucgr.H03753 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.3e-22 109.4 76 65.8
BraA08t33173Z Brassica rapa HOM05D005247 ORTHO05D006571 5.0e-22 107.5 64 75.0
Eucgr.H03774 Eucalyptus grandis HOM05D005247 ORTHO05D006571 6.6e-22 107.1 76 65.8
PSO675G0879 Papaver somniferum HOM05D005247 ORTHO05D006571 6.6e-22 107.1 76 60.5
Aa31LG9G1800 Aethionema arabicum HOM05D005247 ORTHO05D006571 8.6e-22 106.7 77 61.0
unitig_748.g7195 Utricularia gibba HOM05D005247 ORTHO05D006571 2.5e-21 105.1 99 52.5
Hma1.2p1_3003F.1_g331535 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 5.6e-21 104.0 60 75.0
ATR0706G238 Amborella trichopoda HOM05D005247 ORTHO05D006571 1.2e-20 102.8 76 55.3
Haze_01257 Corylus avellana HOM05D005247 ORTHO05D006571 1.2e-20 102.8 128 43.8
Eucgr.C02045 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.6e-20 102.4 74 63.5
SGA_v2.0_scaffold175G39318 Striga asiatica HOM05D005247 ORTHO05D006571 2.8e-20 101.7 76 61.8
SHI00299 Sapria himalayana HOM05D005247 ORTHO05D000987 5.2e-19 97.4 77 53.2
Thhalv10021000m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 8.9e-19 96.7 69 60.9
HPP92_013697 Vanilla planifolia HOM05D005247 ORTHO05D006571 2.2e-17 92.0 64 62.5
RcHm_v2.0_Chr4g0421901 Rosa chinensis HOM05D005247 ORTHO05D006571 1.2e-15 86.3 50 74.0
Psat4g226360 Pisum sativum HOM05D005247 ORTHO05D006571 4.3e-13 77.8 36 97.2
Eucgr.F02603 Eucalyptus grandis HOM05D005247 ORTHO05D006571 5.2e-11 70.9 43 72.1


User provided reference genes

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