Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g094920 Pisum sativum HOM05D006242 ORTHO05D007936 2.7e-183 645.2 321 100.0
Medtr1g050428 Medicago truncatula HOM05D006242 ORTHO05D007936 1.6e-135 486.5 272 88.6
Ca_19722_v3 Cicer arietinum L. HOM05D006242 ORTHO05D007936 1.9e-133 479.6 272 86.8
Lj6g0025800 Lotus japonicus HOM05D006242 ORTHO05D007936 2.4e-128 462.6 300 78.0
Lalb_Chr19g0129141 Lupinus albus HOM05D006242 ORTHO05D007936 5.6e-117 424.9 272 77.2
TPR.G10622 Trifolium pratense HOM05D006242 ORTHO05D007936 7.6e-114 414.5 274 77.0
arahy.Tifrunner.gnm1.ann1.PA3R73 Arachis hypogaea HOM05D006242 ORTHO05D007936 4.6e-111 405.2 291 70.8
Glyma.02G163900 Glycine max HOM05D006242 ORTHO05D007936 3.9e-110 402.1 272 75.0
QL11p013482 Quercus lobata HOM05D006242 ORTHO05D007936 4.2e-104 382.1 262 70.2
Cfa000677 Carpinus fangiana HOM05D006242 ORTHO05D007936 3.9e-102 375.6 264 68.9
Haze_06141 Corylus avellana HOM05D006242 ORTHO05D007936 6.7e-102 374.8 264 68.9
Atru.chr10.429 Acer truncatum HOM05D006242 ORTHO05D007936 2.0e-101 373.2 265 68.3
MD10G1229500 Malus domestica HOM05D006242 ORTHO05D007936 3.3e-101 372.5 264 69.3
Dinv10532 Davidia involucrata HOM05D006242 ORTHO05D007936 4.3e-101 372.1 265 67.2
Prupe.4G115300 Prunus persica HOM05D006242 ORTHO05D007936 4.3e-101 372.1 264 68.9
Sabra01G0132400 Salix brachista HOM05D006242 ORTHO05D007936 1.4e-99 367.1 265 67.2
Lj6g0012918 Lotus japonicus HOM05D006242 ORTHO05D007936 1.5e-98 363.6 210 85.7
Potri.001G159600 Populus trichocarpa HOM05D006242 ORTHO05D007936 2.6e-98 362.8 263 66.9
RcHm_v2.0_Chr5g0020621 Rosa chinensis HOM05D006242 ORTHO05D007936 1.3e-97 360.5 264 67.0
TWI38G1455 Tripterygium wilfordii HOM05D006242 ORTHO05D007936 2.2e-97 359.8 263 66.2
arahy.Tifrunner.gnm1.ann1.VZGM4G Arachis hypogaea HOM05D006242 ORTHO05D007936 2.9e-97 359.4 265 69.4
GSVIVG01012122001 Vitis vinifera HOM05D006242 ORTHO05D007936 3.8e-97 359.0 258 69.0
Cpa.g.sc30.139 Carica papaya HOM05D006242 ORTHO05D007936 1.1e-96 357.5 260 65.8
FvH4_3g12650 Fragaria vesca HOM05D006242 ORTHO05D007936 1.1e-96 357.5 264 65.9
Manes.03G074100 Manihot esculenta HOM05D006242 ORTHO05D007936 1.1e-96 357.5 259 65.6
Thecc.02G006000 Theobroma cacao HOM05D006242 ORTHO05D007936 1.9e-96 356.7 266 63.9
Hma1.2p1_1499F.1_g287250 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 3.2e-96 355.9 259 64.5
Duzib248G1438 Durio zibethinus HOM05D006242 ORTHO05D007936 1.2e-95 354.0 282 59.9
FAN21G1956 Fragaria x ananassa HOM05D006242 ORTHO05D007936 2.1e-95 353.2 264 65.2
FAN25G2599 Fragaria x ananassa HOM05D006242 ORTHO05D007936 2.1e-95 353.2 264 65.2
MBI02_g26996_MAGBIO Magnolia biondii HOM05D006242 ORTHO05D007936 6.1e-95 351.7 261 65.1
Actinidia22421 Actinidia chinensis HOM05D006242 ORTHO05D007936 7.9e-95 351.3 258 64.7
Rhsim06G0063600 Rhododendron simsii HOM05D006242 ORTHO05D007936 7.9e-95 351.3 259 64.5
Nitab4.5_0008021g0020 Nicotiana tabacum HOM05D006242 ORTHO05D007936 9.7e-93 344.4 256 62.9
Solyc02g031980.3 Solanum lycopersicum HOM05D006242 ORTHO05D007936 9.7e-93 344.4 259 62.2
CANSAT35G0032 Cannabis sativa HOM05D006242 ORTHO05D007936 2.2e-92 343.2 264 64.4
PGSC0003DMG400014939 Solanum tuberosum HOM05D006242 ORTHO05D007936 2.2e-92 343.2 259 62.5
Sc17g0004220 Simmondsia chinensis HOM05D006242 ORTHO05D007936 6.3e-92 341.7 253 64.0
Thhalv10017018m.g Eutrema salsugineum HOM05D006242 ORTHO05D007936 1.4e-91 340.5 260 62.7
CAN.G79.44 Capsicum annuum HOM05D006242 ORTHO05D007936 2.4e-91 339.7 259 61.8
Cc00_g22870 Coffea canephora HOM05D006242 ORTHO05D007936 3.1e-91 339.3 259 63.7
Eucgr.B01565 Eucalyptus grandis HOM05D006242 ORTHO05D007936 4.1e-91 339.0 263 63.1
Gorai.008G050000 Gossypium raimondii HOM05D006242 ORTHO05D007936 7.0e-91 338.2 265 62.3
Gohir.D12G047300 Gossypium hirsutum HOM05D006242 ORTHO05D007936 1.5e-90 337.0 265 61.9
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 7.7e-90 334.7 251 64.1
Gohir.A12G048500 Gossypium hirsutum HOM05D006242 ORTHO05D007936 2.2e-89 333.2 265 61.1
PSO541G0450 Papaver somniferum HOM05D006242 ORTHO05D007936 2.9e-89 332.8 258 63.2
PSO675G0930 Papaver somniferum HOM05D006242 ORTHO05D007936 3.8e-89 332.4 258 62.8
Oeu058943.1 Olea europaea HOM05D006242 ORTHO05D007936 8.5e-89 331.3 275 60.0
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 1.1e-88 330.9 259 60.6
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 1.1e-88 330.9 259 60.6
DCAR_007782 Daucus carota HOM05D006242 ORTHO05D007936 1.1e-88 330.9 266 59.8
PGR004G2427 Punica granatum HOM05D006242 ORTHO05D007936 1.1e-88 330.9 264 62.1
FAN16G0457 Fragaria x ananassa HOM05D006242 ORTHO05D007936 1.9e-88 330.1 291 58.8
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 3.2e-88 329.3 259 59.8
Sp2g07040 Schrenkiella parvula HOM05D006242 ORTHO05D007936 5.5e-88 328.6 255 60.4
EL10Ac7g16757 Beta vulgaris HOM05D006242 ORTHO05D007936 9.4e-88 327.8 259 61.0
Carub.0004s1673 Capsella rubella HOM05D006242 ORTHO05D007936 1.6e-87 327.0 260 59.2
ECA232G2813 Erigeron canadensis HOM05D006242 ORTHO05D007936 2.7e-87 326.2 258 62.0
ClCG01G025640 Citrullus lanatus HOM05D006242 ORTHO05D007936 1.8e-86 323.6 263 59.7
CsaV3_6G052870 Cucumis sativus L. HOM05D006242 ORTHO05D007936 3.9e-86 322.4 263 59.7
Cc09_g05740 Coffea canephora HOM05D006242 ORTHO05D007936 6.7e-86 321.6 264 60.6
AL4G31060 Arabidopsis lyrata HOM05D006242 ORTHO05D007936 1.5e-85 320.5 275 56.0
Phvul.007G242500 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 3.3e-85 319.3 177 86.4
HanXRQChr12g0381511 Helianthus annuus HOM05D006242 ORTHO05D007936 7.4e-85 318.2 258 61.2
COL.COLO4_17635 Corchorus olitorius HOM05D006242 ORTHO05D007936 2.2e-84 316.6 227 66.5
CDE05G0364 Ceratophyllum demersum HOM05D006242 ORTHO05D007936 4.8e-84 315.5 249 59.8
SGA_v2.0_scaffold51G18672 Striga asiatica HOM05D006242 ORTHO05D007936 4.8e-84 315.5 259 59.8
MSTRG.20044 Avicennia marina HOM05D006242 ORTHO05D007936 1.4e-83 313.9 263 58.9
SpUn0157_0010 Schrenkiella parvula HOM05D006242 ORTHO05D007936 3.1e-83 312.8 258 58.1
Zm00001eb233240 Zea mays HOM05D006242 ORTHO05D007936 3.1e-83 312.8 250 61.2
Sed0024740 Sechium edule HOM05D006242 ORTHO05D007936 2.0e-82 310.1 268 56.7
Cc09_g05610 Coffea canephora HOM05D006242 ORTHO05D007936 7.7e-82 308.1 246 61.4
Lj1A1147G28 Lonicera japonica HOM05D006242 ORTHO05D007936 1.0e-81 307.8 227 63.9
MELO3C007020.2 Cucumis melo HOM05D006242 ORTHO05D007936 7.2e-80 301.6 298 52.0
THA.LOC104798560 Tarenaya hassleriana HOM05D006242 ORTHO05D007936 3.6e-79 299.3 327 48.0
Ciclev10016161m.g Citrus clementina HOM05D006242 ORTHO05D007936 8.0e-79 298.1 281 55.5
Migut.K01175 Erythranthe guttata HOM05D006242 ORTHO05D007936 1.4e-78 297.4 263 55.5
Peaxi162Scf00198g01026 Petunia axillaris HOM05D006242 ORTHO05D007936 2.3e-78 296.6 265 55.5
Nitab4.5_0000138g0120 Nicotiana tabacum HOM05D006242 ORTHO05D007936 6.8e-78 295.0 256 56.2
Sopen02g010240 Solanum pennellii HOM05D006242 ORTHO05D007936 1.2e-77 294.3 219 63.5
Hma1.2p1_1499F.1_g287260 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 2.6e-77 293.1 196 67.3
SalBow7G3063 Salvia bowleyana HOM05D006242 ORTHO05D007936 4.4e-77 292.4 266 55.3
Glyma.20G074000 Glycine max HOM05D006242 ORTHO05D007936 4.8e-76 288.9 216 69.9
BcaC02g11584 Brassica carinata HOM05D006242 ORTHO05D007936 1.8e-75 287.0 259 54.8
CSS0025117 Camellia sinensis var. sinensis HOM05D006242 ORTHO05D007936 9.1e-75 284.6 209 65.6
SEGI_06259 Sequoiadendron giganteum HOM05D006242 ORTHO05D007936 9.1e-75 284.6 273 52.4
Cc09_g05660 Coffea canephora HOM05D006242 ORTHO05D007936 1.2e-74 284.3 222 62.2
Hma1.2p1_1700F.1_g298210 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 8.8e-70 268.1 269 53.2
Lsat_1_v5_gn_6_96480 Lactuca sativa HOM05D006242 ORTHO05D007936 2.5e-64 250.0 198 63.1
CiPaw.09G074600 Carya illinoinensis HOM05D006242 ORTHO05D007936 6.1e-63 245.4 180 66.7
VMungo0720G1734 Vigna mungo HOM05D006242 ORTHO05D007936 6.1e-63 245.4 184 70.1
HanXRQChr12g0369481 Helianthus annuus HOM05D006242 ORTHO05D007936 6.8e-62 241.9 211 58.8
SMO203G0088 Selaginella moellendorffii HOM05D006242 ORTHO05D007936 2.2e-60 236.9 258 47.3
Pp3c12_18460 Physcomitrium patens HOM05D006242 ORTHO05D007936 1.1e-56 224.6 276 42.0
Mapoly0026s0041 Marchantia polymorpha HOM05D006242 ORTHO05D007936 2.1e-55 220.3 292 43.8
AUR62040160 Chenopodium quinoa HOM05D006242 ORTHO05D007936 5.2e-54 215.7 169 62.7
AT2G35035 Arabidopsis thaliana HOM05D006242 ORTHO05D007936 6.8e-54 215.3 260 44.6
AagrBONN_evm.TU.Sc2ySwM_228.1028 Anthoceros agrestis HOM05D006242 ORTHO05D007936 4.4e-53 212.6 257 40.9
CARHR129200 Cardamine hirsuta HOM05D006242 ORTHO05D007936 1.7e-49 200.7 169 56.8
Cc09_g05680 Coffea canephora HOM05D006242 ORTHO05D007936 8.6e-49 198.4 185 53.0
CBR_g46754 Chara braunii HOM05D006242 ORTHO05D007936 1.6e-47 194.1 218 44.5
Nn7g38280 Nelumbo nucifera HOM05D006242 ORTHO05D007936 1.4e-43 181.0 258 40.3
TAR624G0344 Trochodendron aralioides HOM05D006242 ORTHO05D007936 2.1e-42 177.2 155 56.1
ATR1094G001 Amborella trichopoda HOM05D006242 ORTHO05D007936 1.2e-39 167.9 172 51.2
unitig_37.g12020 Utricularia gibba HOM05D006242 ORTHO05D007936 4.0e-38 162.9 124 61.3
HPP92_011011 Vanilla planifolia HOM05D006242 ORTHO05D007936 3.4e-37 159.8 127 59.8
TPR.G22035 Trifolium pratense HOM05D006242 ORTHO05D007936 3.3e-32 143.3 92 76.1
GSVIVG01006138001 Vitis vinifera HOM05D006242 ORTHO05D007936 3.3e-32 143.3 90 72.2
Hma1.2p1_1700F.1_g298200 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 7.3e-32 142.1 91 69.2
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 3.4e-29 133.3 201 36.3
SGA_v2.0_scaffold4G02502 Striga asiatica HOM05D006242 ORTHO05D007936 4.4e-29 132.9 91 70.3
Hund15670 Selenicereus undatus HOM05D006242 ORTHO05D007936 2.9e-28 130.2 91 64.8
Aqoxy1G01391 Aquilegia oxysepala HOM05D006242 ORTHO05D007936 3.2e-27 126.7 90 64.4
AUR62037908 Chenopodium quinoa HOM05D006242 ORTHO05D007936 6.2e-23 112.5 86 58.1
ATR1094G019 Amborella trichopoda HOM05D006242 ORTHO05D007936 1.1e-22 111.7 75 65.3
MCO04G402 Micromonas commoda HOM05D006242 ORTHO05D007936 2.6e-21 107.1 167 33.5
Phvul.007G242466 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 2.2e-20 104.0 78 69.2
Cfa025972 Carpinus fangiana HOM05D006242 ORTHO05D007936 8.4e-20 102.1 162 34.6
Cc09_g05720 Coffea canephora HOM05D006242 ORTHO05D007936 1.9e-19 100.9 64 71.9
Cc09_g05640 Coffea canephora HOM05D006242 ORTHO05D007936 1.9e-16 90.9 62 64.5
VMungo0720G2601 Vigna mungo HOM05D006242 ORTHO05D007936 6.2e-15 85.9 67 64.2
Cc09_g05630 Coffea canephora HOM05D006242 ORTHO05D007936 5.3e-14 82.8 108 40.7
CiPaw.09G216300 Carya illinoinensis HOM05D006242 ORTHO05D007936 6.9e-14 82.4 75 58.7
BraA05t20007Z Brassica rapa HOM05D003281 ORTHO05D004128 4.9e-12 76.3 99 42.4
SHI14613 Sapria himalayana HOM05D000105 ORTHO05D000023 8.4e-12 75.5 50 64.0
Cc09_g05710 Coffea canephora HOM05D006242 ORTHO05D007936 1.1e-08 65.1 57 49.1
Os02g0173000 Oryza sativa ssp. japonica HOM05D006242 ORTHO05D007936 1.1e-08 65.1 51 52.9
HPP92_011012 Vanilla planifolia HOM05D006242 ORTHO05D007936 6.2e-07 59.3 110 36.4
Hund15669 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.4e-06 57.4 83 44.6


User provided reference genes

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