Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g080840 Pisum sativum HOM05D005679 ORTHO05D007228 3.9e-193 677.9 338 100.0
TPR.G31118 Trifolium pratense HOM05D005679 ORTHO05D007228 3.3e-160 568.5 332 81.9
Medtr1g060300 Medicago truncatula HOM05D005679 ORTHO05D007228 4.3e-160 568.2 316 86.1
Lj5g0006681 Lotus japonicus HOM05D005679 ORTHO05D007228 3.1e-142 508.8 339 74.3
Glyma.13G153052 Glycine max HOM05D005679 ORTHO05D007228 5.7e-136 488.0 342 71.1
VMungo0720G0655 Vigna mungo HOM05D005679 ORTHO05D007228 1.4e-134 483.4 319 73.0
Phvul.007G229100 Phaseolus vulgaris HOM05D005679 ORTHO05D007228 1.2e-133 480.3 319 72.7
arahy.Tifrunner.gnm1.ann1.J82H2E Arachis hypogaea HOM05D005679 ORTHO05D007228 5.0e-132 474.9 306 73.5
arahy.Tifrunner.gnm1.ann1.5KE53F Arachis hypogaea HOM05D005679 ORTHO05D007228 1.2e-130 470.3 306 72.2
Lalb_Chr21g0315771 Lupinus albus HOM05D005679 ORTHO05D007228 4.0e-129 465.3 316 72.8
TAR633G0672 Trochodendron aralioides HOM05D005679 ORTHO05D007228 4.6e-117 425.2 313 62.3
Ca_26654_v3 Cicer arietinum L. HOM05D005679 ORTHO05D007228 8.6e-116 421.0 260 82.3
CANSAT80G1368 Cannabis sativa HOM05D005679 ORTHO05D007228 6.2e-114 414.8 317 62.1
Thecc.05G087100 Theobroma cacao HOM05D005679 ORTHO05D007228 1.4e-113 413.7 324 60.8
ClCG10G019090 Citrullus lanatus HOM05D005679 ORTHO05D007228 2.0e-112 409.8 312 61.9
Glyma.10G071200 Glycine max HOM05D005679 ORTHO05D007228 4.4e-112 408.7 319 64.3
CiPaw.09G012600 Carya illinoinensis HOM05D005679 ORTHO05D007228 9.8e-112 407.5 310 62.3
MD12G1023600 Malus domestica HOM05D005679 ORTHO05D007228 4.9e-111 405.2 309 61.5
Rhsim03G0076400 Rhododendron simsii HOM05D005679 ORTHO05D007228 4.9e-111 405.2 309 62.5
GSVIVG01033827001 Vitis vinifera HOM05D005679 ORTHO05D007228 6.4e-111 404.8 312 60.6
MELO3C009462.2 Cucumis melo HOM05D005679 ORTHO05D007228 8.3e-111 404.4 312 61.2
Duzib093G1300 Durio zibethinus HOM05D005679 ORTHO05D007228 1.1e-110 404.1 312 61.9
Atru.chr8.1566 Acer truncatum HOM05D005679 ORTHO05D007228 5.4e-110 401.7 301 61.1
MD14G1020800 Malus domestica HOM05D005679 ORTHO05D007228 7.0e-110 401.4 309 60.8
Sabra06G0062900 Salix brachista HOM05D005679 ORTHO05D007228 1.2e-109 400.6 302 64.9
CsaV3_3G037160 Cucumis sativus L. HOM05D005679 ORTHO05D007228 1.6e-109 400.2 312 59.9
Hma1.2p1_0536F.1_g174040 Hydrangea macrophylla HOM05D005679 ORTHO05D007228 2.0e-109 399.8 306 64.1
Gohir.D04G100800 Gossypium hirsutum HOM05D005679 ORTHO05D007228 2.7e-109 399.4 314 59.9
Potri.006G083300 Populus trichocarpa HOM05D005679 ORTHO05D007228 2.7e-109 399.4 308 63.3
Gorai.009G404000 Gossypium raimondii HOM05D005679 ORTHO05D007228 1.0e-108 397.5 314 59.9
Actinidia05440 Actinidia chinensis HOM05D005679 ORTHO05D007228 1.7e-108 396.7 309 62.8
vmacro07401 Vaccinium macrocarpon HOM05D005679 ORTHO05D007228 2.3e-108 396.4 334 57.5
COL.COLO4_29768 Corchorus olitorius HOM05D005679 ORTHO05D007228 5.0e-108 395.2 312 58.7
Gohir.A04G063700 Gossypium hirsutum HOM05D005679 ORTHO05D007228 1.9e-107 393.3 314 59.6
RcHm_v2.0_Chr3g0472981 Rosa chinensis HOM05D005679 ORTHO05D007228 1.9e-107 393.3 309 62.1
Eucgr.A01508 Eucalyptus grandis HOM05D005679 ORTHO05D007228 2.5e-107 392.9 325 59.7
Ciclev10012247m.g Citrus clementina HOM05D005679 ORTHO05D007228 3.6e-106 389.0 313 59.7
Manes.09G056451 Manihot esculenta HOM05D005679 ORTHO05D007228 6.2e-106 388.3 309 61.5
PGR004G0569 Punica granatum HOM05D005679 ORTHO05D007228 6.2e-106 388.3 312 59.0
Migut.J01051 Erythranthe guttata HOM05D005679 ORTHO05D007228 8.1e-106 387.9 305 58.0
FAN05G0675 Fragaria x ananassa HOM05D005679 ORTHO05D007228 4.0e-105 385.6 309 60.8
FAN14G3109 Fragaria x ananassa HOM05D005679 ORTHO05D007228 1.2e-104 384.0 309 60.8
FvH4_6g18450 Fragaria vesca HOM05D005679 ORTHO05D007228 1.5e-104 383.6 309 60.8
Dinv21221 Davidia involucrata HOM05D005679 ORTHO05D007228 2.6e-104 382.9 310 59.7
Peaxi162Scf00040g01117 Petunia axillaris HOM05D005679 ORTHO05D007228 5.4e-102 375.2 305 58.7
Carub.0004s1806 Capsella rubella HOM05D005679 ORTHO05D007228 1.6e-101 373.6 305 60.0
Sp4g18530 Schrenkiella parvula HOM05D005679 ORTHO05D007228 1.6e-101 373.6 312 57.4
MSTRG.5837 Avicennia marina HOM05D005679 ORTHO05D007228 2.1e-101 373.2 306 56.5
Aa31LG5G21440 Aethionema arabicum HOM05D005679 ORTHO05D007228 7.8e-101 371.3 312 57.7
Nn6g34939 Nelumbo nucifera HOM05D005679 ORTHO05D007228 7.8e-101 371.3 321 55.5
Solyc09g009630.3 Solanum lycopersicum HOM05D005679 ORTHO05D007228 7.8e-101 371.3 305 58.0
Sopen09g004390 Solanum pennellii HOM05D005679 ORTHO05D007228 7.8e-101 371.3 305 58.0
A03p20010 Brassica napus HOM05D005679 ORTHO05D007228 6.6e-100 368.2 306 58.5
BraA03t11252Z Brassica rapa HOM05D005679 ORTHO05D007228 6.6e-100 368.2 306 58.5
Lsat_1_v5_gn_1_48041 Lactuca sativa HOM05D005679 ORTHO05D007228 1.9e-99 366.7 311 55.6
PGSC0003DMG401002654 Solanum tuberosum HOM05D005679 ORTHO05D007228 2.5e-99 366.3 305 57.7
Oeu047193.1 Olea europaea HOM05D005679 ORTHO05D007228 4.3e-99 365.5 306 58.8
Thhalv10016950m.g Eutrema salsugineum HOM05D005679 ORTHO05D007228 5.6e-99 365.2 318 56.0
AL4G32420 Arabidopsis lyrata HOM05D005679 ORTHO05D007228 9.5e-99 364.4 312 57.1
Aqoxy4G02804 Aquilegia oxysepala HOM05D005679 ORTHO05D007228 1.2e-98 364.0 323 54.8
BcaB01g03852 Brassica carinata HOM05D005679 ORTHO05D007228 6.2e-98 361.7 307 57.3
Sc02g0000910 Simmondsia chinensis HOM05D005679 ORTHO05D007228 6.2e-98 361.7 298 57.7
FAN02G2684 Fragaria x ananassa HOM05D005679 ORTHO05D007228 8.1e-98 361.3 318 57.2
BolC3t14741H Brassica oleracea HOM05D005679 ORTHO05D007228 1.1e-97 360.9 307 58.0
PSO339G3946 Papaver somniferum HOM05D005679 ORTHO05D007228 1.4e-97 360.5 323 55.1
BcaC01g05669 Brassica carinata HOM05D005679 ORTHO05D007228 1.8e-97 360.1 307 58.0
HanXRQChr10g0313901 Helianthus annuus HOM05D005679 ORTHO05D007228 4.0e-97 359.0 305 54.1
C03p23450 Brassica napus HOM05D005679 ORTHO05D007228 6.8e-97 358.2 307 57.7
SGA_v2.0_scaffold13G06736 Striga asiatica HOM05D005679 ORTHO05D007228 6.8e-97 358.2 293 57.3
Cc06_g05640 Coffea canephora HOM05D005679 ORTHO05D007228 8.9e-97 357.8 305 55.4
AT2G36305 Arabidopsis thaliana HOM05D005679 ORTHO05D007228 2.6e-96 356.3 312 55.4
THA.LOC104807091 Tarenaya hassleriana HOM05D005679 ORTHO05D007228 9.9e-96 354.4 307 55.4
QL07p039311 Quercus lobata HOM05D005679 ORTHO05D007228 4.1e-94 349.0 268 62.3
PSO384G2019 Papaver somniferum HOM05D005679 ORTHO05D007228 7.1e-94 348.2 323 52.6
HanXRQChr13g0424691 Helianthus annuus HOM05D005679 ORTHO05D007228 2.1e-93 346.7 293 53.9
TWI77G0106 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 2.7e-93 346.3 278 60.4
HanXRQChr11g0340241 Helianthus annuus HOM05D005679 ORTHO05D007228 4.7e-90 335.5 314 51.9
SHI23954 Sapria himalayana HOM05D005679 ORTHO05D007228 3.4e-88 329.3 310 53.5
TWI53G0317 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 6.4e-87 325.1 276 58.0
Haze_19592 Corylus avellana HOM05D005679 ORTHO05D007228 1.1e-86 324.3 272 61.8
CSS0002811 Camellia sinensis var. sinensis HOM05D005679 ORTHO05D007228 2.1e-85 320.1 229 66.4
Nitab4.5_0001725g0030 Nicotiana tabacum HOM05D005679 ORTHO05D007228 1.0e-84 317.8 305 53.4
FAN05G4213 Fragaria x ananassa HOM05D005679 ORTHO05D007228 2.3e-84 316.6 269 58.7
EL10Ac7g16934 Beta vulgaris HOM05D005679 ORTHO05D007228 2.5e-83 313.2 311 51.4
Ah.08g210640 Amaranthus hybridus HOM05D005679 ORTHO05D007228 8.1e-82 308.1 313 50.8
Prupe.7G112900 Prunus persica HOM05D005679 ORTHO05D007228 8.1e-82 308.1 221 65.6
Nitab4.5_0002400g0100 Nicotiana tabacum HOM05D005679 ORTHO05D007228 9.9e-80 301.2 337 49.0
HPP92_006355 Vanilla planifolia HOM05D005679 ORTHO05D007228 9.9e-80 301.2 307 51.1
ECA248G1272 Erigeron canadensis HOM05D005679 ORTHO05D007228 3.8e-79 299.3 259 54.8
Sed0004661 Sechium edule HOM05D005679 ORTHO05D007228 1.1e-75 287.7 244 57.8
CAN.G397.28 Capsicum annuum HOM05D005679 ORTHO05D007228 3.3e-75 286.2 222 60.8
ATR0568G150 Amborella trichopoda HOM05D005679 ORTHO05D007228 4.3e-75 285.8 271 55.7
TAR636G2700 Trochodendron aralioides HOM05D005679 ORTHO05D007228 9.9e-72 274.6 244 55.7
HanXRQChr10g0313981 Helianthus annuus HOM05D005679 ORTHO05D007228 1.7e-71 273.9 249 51.0
unitig_749.g14296 Utricularia gibba HOM05D005679 ORTHO05D007228 1.6e-69 267.3 271 50.9
HanXRQChr10g0314031 Helianthus annuus HOM05D005679 ORTHO05D007228 1.4e-65 254.2 209 55.5
Mapoly0066s0044 Marchantia polymorpha HOM05D005679 ORTHO05D007228 2.9e-63 246.5 312 44.6
Zm00001eb285910 Zea mays HOM05D005679 ORTHO05D007228 7.9e-61 238.4 308 43.8
Os05g0357700 Oryza sativa ssp. japonica HOM05D005679 ORTHO05D007228 5.7e-59 232.3 222 53.6
SMO203G0038 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 6.9e-57 225.3 321 39.3
Pp3c4_17190 Physcomitrium patens HOM05D005679 ORTHO05D007228 1.0e-55 221.5 308 41.2
AUR62028550 Chenopodium quinoa HOM05D005679 ORTHO05D007228 1.3e-55 221.1 152 63.2
Lj9A526G37 Lonicera japonica HOM05D005679 ORTHO05D007228 6.5e-55 218.8 320 40.6
HanXRQChr10g0314011 Helianthus annuus HOM05D005679 ORTHO05D007228 3.2e-54 216.5 187 54.5
CARHR130580 Cardamine hirsuta HOM05D005679 ORTHO05D007228 1.5e-51 207.6 198 52.5
SMO327G0022 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 2.5e-51 206.8 300 39.3
SEGI_36814 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 1.5e-48 197.6 225 48.4
Sed0012745 Sechium edule HOM05D005679 ORTHO05D007228 1.9e-46 190.7 215 47.0
AUR62033502 Chenopodium quinoa HOM05D005679 ORTHO05D007228 1.8e-44 184.1 153 58.2
AagrBONN_evm.TU.Sc2ySwM_228.1072 Anthoceros agrestis HOM05D005679 ORTHO05D007228 7.4e-43 178.7 196 45.4
CBR_g961 Chara braunii HOM05D005679 ORTHO05D007228 6.5e-39 165.6 233 37.8
Lj2A135T55 Lonicera japonica HOM05D005679 ORTHO05D007228 4.7e-37 159.5 179 48.6
Dinv31674 Davidia involucrata HOM05D005679 ORTHO05D007228 1.1e-35 154.8 256 38.3
HanXRQChr10g0313891 Helianthus annuus HOM05D005679 ORTHO05D007228 2.6e-35 153.7 161 50.9
CDE02G3258 Ceratophyllum demersum HOM05D005679 ORTHO05D007228 1.7e-34 151.0 105 63.8
SalBow3G2040 Salvia bowleyana HOM05D005679 ORTHO05D007228 1.1e-30 138.3 154 46.8
Cre01.g042150 Chlamydomonas reinhardtii HOM05D005679 ORTHO05D007228 2.6e-27 127.1 149 43.6
Lsat_1_v5_gn_1_48021 Lactuca sativa HOM05D005679 ORTHO05D007228 5.7e-27 125.9 90 61.1
Lj2A135G55 Lonicera japonica HOM05D005679 ORTHO05D007228 1.7e-26 124.4 73 69.9
AUR62028549 Chenopodium quinoa HOM05D005679 ORTHO05D007228 2.5e-22 110.5 166 41.6
MCO10G317 Micromonas commoda HOM05D005679 ORTHO05D007228 2.7e-21 107.1 145 42.1
AUR62033501 Chenopodium quinoa HOM05D005679 ORTHO05D007228 1.0e-20 105.1 182 37.9
Gohir.D09G135950 Gossypium hirsutum HOM05D005679 ORTHO05D007228 1.0e-20 105.1 74 62.2
DCAR_009157 Daucus carota HOM05D005679 ORTHO05D007228 1.4e-20 104.8 117 44.4
Gorai.006G155900 Gossypium raimondii HOM05D005679 ORTHO05D007228 2.3e-20 104.0 74 60.8
Actinidia14313 Actinidia chinensis HOM05D005679 ORTHO05D007228 3.7e-18 96.7 201 33.8
SEGI_00479 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 1.5e-14 84.7 76 46.1
HanXRQChr10g0313971 Helianthus annuus HOM05D005679 ORTHO05D007228 2.3e-12 77.4 106 40.6
PRCOL_00001551 Prasinoderma coloniale HOM05D005679 ORTHO05D007228 1.5e-11 74.7 135 35.6
arahy.Tifrunner.gnm1.ann1.7P1BGF Arachis hypogaea HOM05D005679 ORTHO05D003748 1.3e-10 71.6 37 81.1


User provided reference genes

Program Settings