Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 5.5e-59 230.7 113 100.0
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 3.1e-30 135.2 80 82.5
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 4.1e-30 134.8 80 83.8
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 5.0e-28 127.9 79 81.0
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 8.6e-28 127.1 79 78.5
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 5.2e-25 117.9 80 72.5
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 6.8e-25 117.5 79 72.2
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 6.8e-25 117.5 79 72.2
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 6.8e-25 117.5 79 72.2
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 8.9e-25 117.1 76 73.7
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 8.9e-25 117.1 80 71.2
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 5.7e-24 114.4 80 70.0
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 9.8e-24 113.6 80 70.0
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 1.3e-23 113.2 81 65.4
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 4.9e-23 111.3 89 62.9
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.1e-22 110.2 81 66.7
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 1.1e-22 110.2 81 64.2
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 1.4e-22 109.8 76 68.4
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.4e-22 109.8 81 65.4
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 1.8e-22 109.4 76 67.1
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 5.4e-22 107.8 73 68.5
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 7.0e-22 107.5 72 69.4
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 1.6e-21 106.3 73 68.5
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 1.6e-21 106.3 76 61.8
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 1.6e-21 106.3 78 62.8
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 2.0e-21 105.9 77 64.9
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 4.6e-21 104.8 81 61.7
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 5.9e-21 104.4 74 67.6
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 5.9e-21 104.4 77 63.6
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 5.9e-21 104.4 75 62.7
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 5.9e-21 104.4 74 68.9
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 2.3e-20 102.4 75 60.0
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 2.3e-20 102.4 80 62.5
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 3.9e-20 101.7 75 62.7
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 3.9e-20 101.7 78 65.4
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 3.9e-20 101.7 73 64.4
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 5.0e-20 101.3 78 61.5
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 5.0e-20 101.3 92 52.2
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 5.0e-20 101.3 92 52.2
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 5.0e-20 101.3 73 61.6
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 6.6e-20 100.9 81 60.5
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 8.6e-20 100.5 73 65.8
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 8.6e-20 100.5 74 64.9
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 8.6e-20 100.5 74 64.9
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 1.5e-19 99.8 79 63.3
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 1.9e-19 99.4 77 62.3
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 1.9e-19 99.4 80 57.5
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 1.9e-19 99.4 75 60.0
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 1.9e-19 99.4 81 56.8
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 3.3e-19 98.6 81 59.3
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 3.3e-19 98.6 73 60.3
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 3.3e-19 98.6 69 69.6
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 4.3e-19 98.2 78 59.0
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 4.3e-19 98.2 80 60.0
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 4.3e-19 98.2 75 60.0
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 4.3e-19 98.2 73 64.4
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 5.6e-19 97.8 73 63.0
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 5.6e-19 97.8 73 60.3
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 7.3e-19 97.4 81 58.0
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 9.5e-19 97.1 73 58.9
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 9.5e-19 97.1 75 61.3
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 1.2e-18 96.7 62 71.0
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 1.6e-18 96.3 75 61.3
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 2.1e-18 95.9 77 57.1
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 2.1e-18 95.9 77 57.1
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 2.1e-18 95.9 77 55.8
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 2.8e-18 95.5 77 57.1
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 2.8e-18 95.5 92 50.0
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 3.6e-18 95.1 77 59.7
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 4.7e-18 94.7 76 61.8
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 4.7e-18 94.7 77 55.8
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 4.7e-18 94.7 75 58.7
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 4.7e-18 94.7 73 56.2
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 4.7e-18 94.7 73 60.3
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 4.7e-18 94.7 73 60.3
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 4.7e-18 94.7 73 61.6
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 6.2e-18 94.4 77 57.1
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 6.2e-18 94.4 77 54.5
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 6.2e-18 94.4 78 56.4
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 6.2e-18 94.4 68 63.2
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 8.0e-18 94.0 75 57.3
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 8.0e-18 94.0 77 55.8
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 8.0e-18 94.0 77 54.5
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 1.1e-17 93.6 76 57.9
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 1.4e-17 93.2 77 54.5
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 1.4e-17 93.2 77 54.5
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 1.4e-17 93.2 77 54.5
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 1.4e-17 93.2 77 55.8
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 4.0e-17 91.7 76 53.9
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 5.2e-17 91.3 73 56.2
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 5.2e-17 91.3 91 53.8
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 8.9e-17 90.5 79 54.4
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 8.9e-17 90.5 75 56.0
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 2.6e-16 89.0 76 55.3
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 3.4e-16 88.6 88 48.9
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 5.8e-16 87.8 78 51.3
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 5.8e-16 87.8 82 52.4
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 1.3e-15 86.7 73 56.2
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 2.9e-15 85.5 69 60.9
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 3.7e-15 85.1 65 56.9
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 3.7e-15 85.1 82 51.2
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 3.7e-15 85.1 73 54.8
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 4.9e-15 84.7 73 54.8
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 3.2e-14 82.0 78 48.7
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 2.0e-13 79.3 75 52.0
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 2.0e-13 79.3 82 51.2
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 2.7e-13 79.0 75 50.7
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 1.5e-11 73.2 79 49.4
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 1.5e-11 73.2 82 48.8
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 6.2e-10 67.8 68 45.6
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 2.6e-08 62.4 47 59.6
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 2.6e-08 62.4 47 59.6
BcaC08g43911 Brassica carinata HOM05D006467 ORTHO05D008012 9.9e-08 60.5 47 59.6
FAN26G0965 Fragaria x ananassa HOM05D000871 ORTHO05D011596 9.9e-08 60.5 41 65.9
arahy.Tifrunner.gnm1.ann1.Q46SAL Arachis hypogaea HOM05D006467 ORTHO05D008012 1.7e-07 59.7 42 69.0
arahy.Tifrunner.gnm1.ann1.LA4XPU Arachis hypogaea HOM05D006467 ORTHO05D008012 8.3e-07 57.4 33 81.8
PSO063G7135 Papaver somniferum HOM05D000530 ORTHO05D000621 8.3e-07 57.4 35 71.4
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 1.1e-06 57.0 41 63.4
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 1.9e-06 56.2 41 63.4
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 1.9e-06 56.2 38 63.2
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 1.9e-06 56.2 38 63.2
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 9.2e-06 53.9 41 61.0


User provided reference genes

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