Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 1.0e-34 149.4 72 100.0
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 2.1e-32 141.7 72 94.4
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 3.4e-30 134.4 69 92.8
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 1.7e-29 132.1 72 86.1
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 2.9e-29 131.3 72 84.7
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 2.9e-29 131.3 72 84.7
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 2.9e-29 131.3 72 84.7
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 4.9e-29 130.6 68 91.2
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 1.4e-28 129.0 72 84.7
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.5e-28 128.3 72 83.3
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 2.5e-28 128.3 72 83.3
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 7.1e-28 126.7 67 85.1
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 1.2e-27 125.9 72 80.6
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 1.8e-26 122.1 72 77.8
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 3.9e-26 120.9 72 76.4
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 77.8
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 8.7e-26 119.8 71 77.5
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 76.4
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 8.7e-26 119.8 72 76.4
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 1.1e-25 119.4 85 71.8
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 77.8
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 77.8
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 77.8
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 77.8
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 77.8
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 1.5e-25 119.0 72 75.0
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 1.9e-25 118.6 71 78.9
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 1.9e-25 118.6 71 78.9
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 1.9e-25 118.6 72 77.8
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 3.3e-25 117.9 71 74.6
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 4.3e-25 117.5 71 81.7
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 76.4
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 73.6
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 73.6
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 73.6
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 4.3e-25 117.5 72 73.6
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 7.4e-25 116.7 72 75.0
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 7.4e-25 116.7 72 76.4
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 9.6e-25 116.3 72 76.4
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 9.6e-25 116.3 72 76.4
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.3e-24 115.9 72 73.6
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 1.3e-24 115.9 72 72.2
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 1.3e-24 115.9 72 73.6
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.3e-24 115.9 71 76.1
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 1.6e-24 115.5 71 71.8
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 1.6e-24 115.5 67 77.6
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 2.8e-24 114.8 71 77.5
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 2.8e-24 114.8 70 77.1
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 3.7e-24 114.4 62 82.3
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 3.7e-24 114.4 71 70.4
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 4.8e-24 114.0 64 78.1
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 4.8e-24 114.0 72 75.0
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 6.2e-24 113.6 67 74.6
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 8.2e-24 113.2 72 70.8
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 1.1e-23 112.8 67 74.6
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 1.1e-23 112.8 67 74.6
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 1.1e-23 112.8 72 73.6
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 1.8e-23 112.1 67 73.1
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 1.8e-23 112.1 67 73.1
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 1.8e-23 112.1 67 73.1
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 1.8e-23 112.1 67 73.1
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 1.8e-23 112.1 72 76.4
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 3.1e-23 111.3 70 72.9
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 6.9e-23 110.2 72 69.4
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 9.0e-23 109.8 63 73.0
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 1.5e-22 109.0 66 78.8
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 2.6e-22 108.2 70 68.6
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 2.6e-22 108.2 67 73.1
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 3.4e-22 107.8 72 70.8
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 3.4e-22 107.8 67 70.1
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 4.5e-22 107.5 70 68.6
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 4.5e-22 107.5 72 70.8
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 5.8e-22 107.1 67 73.1
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 7.6e-22 106.7 131 47.3
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 1.0e-21 106.3 62 77.4
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 1.7e-21 105.5 64 70.3
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 2.9e-21 104.8 82 61.0
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 2.9e-21 104.8 75 68.0
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 8.4e-21 103.2 67 68.7
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 1.1e-20 102.8 78 64.1
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 1.1e-20 102.8 70 65.7
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 2.5e-20 101.7 59 74.6
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 3.2e-20 101.3 72 63.9
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 7.1e-20 100.1 64 70.3
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 1.6e-19 99.0 101 54.5
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 1.5e-17 92.4 61 67.2
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 2.5e-17 91.7 61 65.6
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 1.6e-16 89.0 49 79.6
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 3.7e-16 87.8 137 38.7
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 6.3e-16 87.0 72 63.9
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 6.3e-16 87.0 50 80.0
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 1.4e-15 85.9 52 75.0
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 9.0e-15 83.2 64 65.6
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 2.2e-13 78.6 40 90.0
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 8.5e-13 76.6 42 83.3
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 5.5e-12 73.9 42 78.6
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 1.6e-11 72.4 52 65.4
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 6.1e-11 70.5 67 53.7
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 7.9e-11 70.1 166 30.7
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 3.9e-10 67.8 41 75.6
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 8.8e-10 66.6 42 73.8
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 2.0e-09 65.5 41 70.7
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 2.0e-09 65.5 42 69.0
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 3.3e-09 64.7 42 69.0
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 5.7e-09 63.9 42 69.0
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 2.2e-08 62.0 41 73.2
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 2.2e-08 62.0 35 80.0
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 3.1e-07 58.2 40 70.0
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 5.3e-07 57.4 40 60.0
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 5.3e-07 57.4 31 77.4
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 9.1e-07 56.6 36 69.4
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.2e-06 56.2 33 72.7
Actinidia00061 Actinidia chinensis HOM05D006941 ORTHO05D008361 3.4e-06 54.7 30 76.7
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 4.5e-06 54.3 45 53.3
Medtr2g048480 Medicago truncatula HOM05D006941 ORTHO05D008361 5.9e-06 53.9 28 89.3
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 7.7e-06 53.5 29 82.8
MELO3C035183.2 Cucumis melo HOM05D006941 ORTHO05D008361 7.7e-06 53.5 30 76.7


User provided reference genes

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