Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g049160 Pisum sativum HOM05D006018 ORTHO05D320225 1.3e-41 172.6 85 100.0
Psat6g049120 Pisum sativum HOM05D006018 ORTHO05D007545 3.8e-12 74.7 37 94.6
Ca_12272_v3 Cicer arietinum L. HOM05D006018 ORTHO05D007545 4.2e-11 71.2 37 89.2
Medtr1g048370 Medicago truncatula HOM05D006018 ORTHO05D007545 1.2e-10 69.7 37 89.2
TPR.G19796 Trifolium pratense HOM05D006018 ORTHO05D007545 4.6e-10 67.8 37 83.8
Gohir.A05G398800 Gossypium hirsutum HOM05D006018 ORTHO05D007545 3.7e-07 58.2 37 70.3
Gohir.D04G017100 Gossypium hirsutum HOM05D006018 ORTHO05D007545 3.7e-07 58.2 37 70.3
Gorai.012G019800 Gossypium raimondii HOM05D006018 ORTHO05D007545 3.7e-07 58.2 37 70.3
Duzib106G1265 Durio zibethinus HOM05D006018 ORTHO05D007545 4.8e-07 57.8 37 64.9
arahy.Tifrunner.gnm1.ann1.Z7U9ST Arachis hypogaea HOM05D006018 ORTHO05D007545 8.2e-07 57.0 37 73.0
Lj6g0008960 Lotus japonicus HOM05D006018 ORTHO05D007545 8.2e-07 57.0 37 75.7
Glyma.20G072400 Glycine max HOM05D006018 ORTHO05D007545 1.1e-06 56.6 33 81.8
Glyma.10G121524 Glycine max HOM05D006018 ORTHO05D007545 1.4e-06 56.2 33 78.8
arahy.Tifrunner.gnm1.ann1.V4FSHN Arachis hypogaea HOM05D006018 ORTHO05D007545 1.8e-06 55.8 37 70.3
arahy.Tifrunner.gnm1.ann1.Z71440 Arachis hypogaea HOM05D006018 ORTHO05D007545 1.8e-06 55.8 37 70.3
Ciclev10016037m.g Citrus clementina HOM05D006018 ORTHO05D007545 1.8e-06 55.8 37 70.3
arahy.Tifrunner.gnm1.ann1.QNY1I5 Arachis hypogaea HOM05D006018 ORTHO05D007545 2.4e-06 55.5 37 70.3
Thecc.10G116100 Theobroma cacao HOM05D006018 ORTHO05D007545 2.4e-06 55.5 37 64.9
arahy.Tifrunner.gnm1.ann1.BN00BV Arachis hypogaea HOM05D006018 ORTHO05D007545 5.3e-06 54.3 35 71.4
VMungo0720G2948 Vigna mungo HOM05D006018 ORTHO05D007545 6.9e-06 53.9 33 78.8
Sed0014972 Sechium edule HOM05D006018 ORTHO05D007545 9.1e-06 53.5 33 72.7


User provided reference genes

Program Settings