Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g044600 Pisum sativum HOM05D007426 ORTHO05D009167 1.0e-107 395.2 201 100.0
Ca_12586_v3 Cicer arietinum L. HOM05D007426 ORTHO05D009167 3.1e-67 260.8 201 72.6
Medtr1g031720 Medicago truncatula HOM05D007426 ORTHO05D009167 1.6e-63 248.4 203 69.5
Lalb_Chr10g0096341 Lupinus albus HOM05D007426 ORTHO05D009167 4.6e-47 193.7 144 68.8
arahy.Tifrunner.gnm1.ann1.5H8JFW Arachis hypogaea HOM05D003289 ORTHO05D009167 4.1e-43 180.6 177 54.2
Lj2g0001206 Lotus japonicus HOM05D007426 ORTHO05D009167 6.9e-43 179.9 194 56.7
arahy.Tifrunner.gnm1.ann1.A3A4LS Arachis hypogaea HOM05D007426 ORTHO05D009167 9.0e-43 179.5 177 54.2
Glyma.14G156100 Glycine max HOM05D007426 ORTHO05D009167 2.6e-42 177.9 191 53.9
Glyma.13G034900 Glycine max HOM05D007426 ORTHO05D009167 5.9e-42 176.8 200 54.5
Phvul.003G029100 Phaseolus vulgaris HOM05D007426 ORTHO05D009167 3.8e-41 174.1 199 50.8
TPR.G36966 Trifolium pratense HOM05D007426 ORTHO05D009167 1.9e-40 171.8 203 56.7
Dinv04907 Davidia involucrata HOM05D007426 ORTHO05D009167 2.7e-39 167.9 177 50.3
VMungo1215G1392 Vigna mungo HOM05D007426 ORTHO05D009167 3.6e-39 167.5 199 51.8
QL01p003061 Quercus lobata HOM05D007426 ORTHO05D009167 1.4e-38 165.6 156 53.2
Sc11g0003960 Simmondsia chinensis HOM05D007426 ORTHO05D009167 5.1e-38 163.7 149 55.7
COL.COLO4_35570 Corchorus olitorius HOM05D002230 ORTHO05D002441 2.0e-37 161.8 156 49.4
CSS0006507 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 2.8e-36 157.9 156 50.6
MELO3C012287.2 Cucumis melo HOM05D007426 ORTHO05D009167 3.7e-36 157.5 211 43.6
Manes.06G063200 Manihot esculenta HOM05D007426 ORTHO05D009167 6.3e-36 156.8 156 48.7
Aqoxy3G03989 Aquilegia oxysepala HOM05D007426 ORTHO05D009167 1.4e-35 155.6 177 48.6
Nn3g17999 Nelumbo nucifera HOM05D007426 ORTHO05D009167 1.4e-35 155.6 156 50.0
CiPaw.05G245100 Carya illinoinensis HOM05D007426 ORTHO05D009167 2.4e-35 154.8 207 45.9
Ciclev10017504m.g Citrus clementina HOM05D007426 ORTHO05D009167 5.3e-35 153.7 156 48.1
Haze_00680 Corylus avellana HOM05D007426 ORTHO05D009167 5.3e-35 153.7 142 54.9
MD16G1034800 Malus domestica HOM05D007426 ORTHO05D009167 5.3e-35 153.7 177 47.5
MD13G1032800 Malus domestica HOM05D007426 ORTHO05D009167 2.6e-34 151.4 177 47.5
GSVIVG01011807001 Vitis vinifera HOM05D000798 ORTHO05D000659 3.4e-34 151.0 141 54.6
TAR629G2850 Trochodendron aralioides HOM05D007426 ORTHO05D009167 4.5e-34 150.6 156 48.7
CsaV3_5G034750 Cucumis sativus L. HOM05D007426 ORTHO05D009167 1.0e-33 149.4 211 42.2
Cc11_g09290 Coffea canephora HOM05D007426 ORTHO05D009167 1.7e-33 148.7 145 50.3
Gohir.A03G149700 Gossypium hirsutum HOM05D007426 ORTHO05D009167 2.9e-33 147.9 155 50.3
Atru.chr11.331 Acer truncatum HOM05D007426 ORTHO05D009167 3.8e-33 147.5 149 48.3
MSTRG.13563 Avicennia marina HOM05D007426 ORTHO05D009167 3.8e-33 147.5 149 46.3
Gohir.D02G172600 Gossypium hirsutum HOM05D007426 ORTHO05D009167 3.8e-33 147.5 155 49.7
RcHm_v2.0_Chr4g0434041 Rosa chinensis HOM05D007426 ORTHO05D009167 5.0e-33 147.1 197 43.7
Gorai.005G194300 Gossypium raimondii HOM05D007426 ORTHO05D009167 6.5e-33 146.7 155 49.0
Cpa.g.sc65.89 Carica papaya HOM05D007426 ORTHO05D009167 1.9e-32 145.2 148 46.6
Aa31LG7G6970 Aethionema arabicum HOM05D007426 ORTHO05D009167 2.5e-32 144.8 167 43.1
Lj3A877T95 Lonicera japonica HOM05D007426 ORTHO05D009167 3.2e-32 144.4 149 50.3
SalBow8G0581 Salvia bowleyana HOM05D007426 ORTHO05D009167 5.5e-32 143.7 144 44.4
Eucgr.G00774 Eucalyptus grandis HOM05D007426 ORTHO05D009167 1.2e-31 142.5 149 49.0
CANSAT01G1275 Cannabis sativa HOM05D007426 ORTHO05D009167 2.1e-31 141.7 195 42.1
MBI02_g38361_MAGBIO Magnolia biondii HOM05D007426 ORTHO05D009167 2.7e-31 141.4 178 42.1
ClCG04G001050 Citrullus lanatus HOM05D007426 ORTHO05D009167 3.6e-31 141.0 201 43.3
CARHR023340 Cardamine hirsuta HOM05D007426 ORTHO05D009167 1.0e-30 139.4 218 39.4
PGR119G0474 Punica granatum HOM05D007426 ORTHO05D009167 1.0e-30 139.4 146 50.0
Lsat_1_v5_gn_4_15701 Lactuca sativa HOM05D007426 ORTHO05D009167 2.3e-30 138.3 154 42.9
Nitab4.5_0000350g0090 Nicotiana tabacum HOM05D007426 ORTHO05D009167 2.3e-30 138.3 152 48.0
Sed0007337 Sechium edule HOM05D007426 ORTHO05D009167 2.3e-30 138.3 141 51.8
Thhalv10006897m.g Eutrema salsugineum HOM05D007426 ORTHO05D009167 5.1e-30 137.1 172 42.4
Nitab4.5_0003886g0020 Nicotiana tabacum HOM05D007426 ORTHO05D009167 6.7e-30 136.7 152 48.7
THA.LOC104821759 Tarenaya hassleriana HOM05D007426 ORTHO05D009167 8.8e-30 136.3 200 37.0
FAN12G1804 Fragaria x ananassa HOM05D007426 ORTHO05D009167 2.0e-29 135.2 177 42.9
Hma1.2p1_0882F.1_g232200 Hydrangea macrophylla HOM05D007426 ORTHO05D009167 2.0e-29 135.2 145 47.6
Duzib248G0356 Durio zibethinus HOM05D007426 ORTHO05D009167 2.6e-29 134.8 187 40.1
FAN12G0928 Fragaria x ananassa HOM05D007426 ORTHO05D009167 2.6e-29 134.8 177 42.9
Sopen05g004400 Solanum pennellii HOM05D007426 ORTHO05D009167 5.7e-29 133.7 152 44.7
DCAR_023623 Daucus carota HOM05D007426 ORTHO05D009167 9.7e-29 132.9 145 47.6
Solyc05g008560.1 Solanum lycopersicum HOM05D007426 ORTHO05D009167 9.7e-29 132.9 152 44.1
PGSC0003DMG402030517 Solanum tuberosum HOM05D007426 ORTHO05D009167 9.7e-29 132.9 152 44.7
SGA_v2.0_scaffold376G50296 Striga asiatica HOM05D007426 ORTHO05D009167 1.3e-28 132.5 194 39.7
Rhsim09G0137400 Rhododendron simsii HOM05D007426 ORTHO05D009167 2.2e-28 131.7 154 44.2
vmacro10360 Vaccinium macrocarpon HOM05D007426 ORTHO05D009167 2.8e-28 131.3 147 46.9
AL1G36520 Arabidopsis lyrata HOM05D007426 ORTHO05D009167 3.7e-28 131.0 197 41.6
Carub.0001s2246 Capsella rubella HOM05D007426 ORTHO05D009167 8.2e-28 129.8 206 38.3
AT1G22960 Arabidopsis thaliana HOM05D007426 ORTHO05D009167 2.4e-27 128.3 217 40.1
ECA234G2171 Erigeron canadensis HOM05D007426 ORTHO05D009167 2.6e-26 124.8 154 42.2
C05p22170 Brassica napus HOM05D007426 ORTHO05D009167 3.5e-26 124.4 154 40.9
BolC5t30917H Brassica oleracea HOM05D007426 ORTHO05D009167 3.5e-26 124.4 154 40.9
BcaC05g26208 Brassica carinata HOM05D007426 ORTHO05D009167 4.5e-26 124.0 154 40.9
CDE04G0172 Ceratophyllum demersum HOM05D007426 ORTHO05D009167 7.7e-26 123.2 151 44.4
TWI79G0655 Tripterygium wilfordii HOM05D007426 ORTHO05D009167 7.7e-26 123.2 189 40.2
CAN.G1489.16 Capsicum annuum HOM05D007426 ORTHO05D009167 1.3e-25 122.5 158 43.7
Sp1g20420 Schrenkiella parvula HOM05D007426 ORTHO05D009167 1.4e-24 119.0 142 43.0
HPP92_023011 Vanilla planifolia HOM05D007426 ORTHO05D009167 4.2e-24 117.5 183 40.4
BraA09t39664Z Brassica rapa HOM05D007426 ORTHO05D009167 1.4e-22 112.5 177 37.3
Actinidia34749 Actinidia chinensis HOM05D007426 ORTHO05D009167 1.8e-22 112.1 136 46.3
ATR0579G149 Amborella trichopoda HOM05D007426 ORTHO05D009167 1.8e-22 112.1 172 37.8
A01p19900 Brassica napus HOM05D007426 ORTHO05D009167 8.8e-22 109.8 138 39.1
A09p41750 Brassica napus HOM05D007426 ORTHO05D009167 7.4e-21 106.7 138 39.1
BcaB07g32294 Brassica carinata HOM05D007426 ORTHO05D009167 1.1e-19 102.8 137 39.4
Migut.E00390 Erythranthe guttata HOM05D007426 ORTHO05D009167 1.6e-18 99.0 124 41.9
CSS0028756 Camellia sinensis var. sinensis HOM05D007426 ORTHO05D009167 3.5e-18 97.8 96 51.0
Cfa015816 Carpinus fangiana HOM05D007426 ORTHO05D009167 5.9e-18 97.1 82 62.2
FvH4_4g26410 Fragaria vesca HOM05D007426 ORTHO05D009167 1.6e-15 89.0 106 47.2
Oeu048376.1 Olea europaea HOM05D007426 ORTHO05D009167 7.5e-13 80.1 164 34.8
SEGI_36761 Sequoiadendron giganteum HOM05D007426 ORTHO05D009167 9.7e-13 79.7 152 28.3
FAN17G2923 Fragaria x ananassa HOM05D007426 ORTHO05D009167 1.3e-12 79.3 96 47.9
BcaB03g11918 Brassica carinata HOM05D007426 ORTHO05D009167 6.3e-12 77.0 99 40.4
FAN07G1506 Fragaria x ananassa HOM05D007426 ORTHO05D009167 9.1e-11 73.2 58 62.1
TPR.G9703 Trifolium pratense HOM05D007426 ORTHO05D009167 1.1e-08 66.2 37 78.4
CDE07G1153 Ceratophyllum demersum HOM05D007426 ORTHO05D009167 3.2e-08 64.7 71 46.5
Zm00001eb406750 Zea mays HOM05D025020 ORTHO05D009167 8.0e-07 60.1 145 33.1
Zm00001eb164150 Zea mays HOM05D025020 ORTHO05D009167 1.0e-06 59.7 145 33.1
Cc10_g03430 Coffea canephora HOM05D007639 ORTHO05D009509 1.4e-06 59.3 136 29.4


User provided reference genes

Program Settings