Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 1.0e-274 949.5 501 100.0
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 8.2e-256 886.7 496 93.1
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 6.5e-253 877.1 501 92.0
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 9.7e-233 810.1 495 85.1
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 2.6e-225 785.4 495 84.0
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 1.1e-223 780.0 495 82.8
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 4.4e-217 758.1 495 80.0
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 1.3e-216 756.5 495 79.8
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 8.6e-205 717.2 493 78.1
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 6.0e-190 667.9 492 71.7
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 1.3e-189 666.8 496 72.0
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 4.7e-187 658.3 493 71.2
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 1.4e-186 656.8 498 70.7
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 5.2e-186 654.8 494 71.3
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 2.6e-185 652.5 493 70.6
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 7.6e-185 651.0 494 71.7
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 3.2e-183 645.6 494 70.0
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 5.4e-183 644.8 498 69.5
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 2.1e-182 642.9 496 68.8
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 2.7e-182 642.5 493 69.2
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 1.0e-181 640.6 492 68.5
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 1.0e-181 640.6 495 69.1
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 1.7e-181 639.8 497 68.8
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 3.9e-181 638.6 494 68.6
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 1.1e-180 637.1 497 68.8
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 1.5e-180 636.7 501 68.7
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 3.3e-180 635.6 495 68.1
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 1.2e-179 633.6 493 69.0
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 2.1e-179 632.9 498 68.1
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 3.6e-179 632.1 498 68.1
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 3.1e-178 629.0 496 68.8
THA.LOC104816518 Tarenaya hassleriana HOM05D006817 ORTHO05D008603 4.0e-178 628.6 498 66.7
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 5.3e-178 628.2 496 68.3
PSO170G5674 Papaver somniferum HOM05D006817 ORTHO05D008603 6.9e-178 627.9 492 68.1
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 7.6e-177 624.4 494 68.6
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 7.6e-177 624.4 494 68.8
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 2.2e-176 622.9 479 70.6
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 2.9e-176 622.5 496 68.5
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 4.9e-176 621.7 508 67.5
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 1.4e-175 620.2 499 66.9
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 2.4e-175 619.4 508 67.1
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 6.0e-174 614.8 500 65.8
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 7.8e-174 614.4 497 67.2
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 7.8e-174 614.4 514 65.2
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 3.0e-173 612.5 494 65.8
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 3.3e-172 609.0 507 66.1
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 5.6e-172 608.2 491 66.6
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 1.3e-171 607.1 491 66.6
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 1.6e-171 606.7 491 66.8
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 6.9e-170 601.3 500 65.6
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 6.9e-170 601.3 497 67.4
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 1.2e-169 600.5 496 65.7
EL10Ac2g04256 Beta vulgaris HOM05D006817 ORTHO05D008603 4.5e-169 598.6 490 64.7
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 1.1e-167 594.0 495 65.9
CDE04G2280 Ceratophyllum demersum HOM05D006817 ORTHO05D008603 3.2e-167 592.4 497 63.6
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 4.2e-167 592.0 493 66.1
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 1.2e-166 590.5 557 60.5
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 6.7e-165 584.7 497 64.8
HPP92_019064 Vanilla planifolia HOM05D006817 ORTHO05D008603 8.7e-165 584.3 488 62.9
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 4.3e-164 582.0 495 62.6
Lsat_1_v5_gn_9_59361 Lactuca sativa HOM05D006817 ORTHO05D008603 4.8e-163 578.6 496 63.1
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 6.2e-163 578.2 543 60.4
PSO017G6024 Papaver somniferum HOM05D006817 ORTHO05D008603 6.2e-163 578.2 455 68.4
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 5.3e-162 575.1 518 61.0
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 1.2e-161 573.9 495 63.8
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 1.2e-161 573.9 497 65.2
Cfa001223 Carpinus fangiana HOM05D006817 ORTHO05D008603 4.5e-161 572.0 441 72.8
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 3.8e-160 568.9 490 64.1
QL08p064576 Quercus lobata HOM05D006817 ORTHO05D008603 1.1e-159 567.4 456 69.5
FAN10G2384 Fragaria x ananassa HOM05D006817 ORTHO05D008603 7.1e-159 564.7 452 67.9
FAN01G1353 Fragaria x ananassa HOM05D006817 ORTHO05D008603 3.0e-157 559.3 456 67.3
HanXRQChr15g0493791 Helianthus annuus HOM05D006817 ORTHO05D008603 1.4e-154 550.4 475 62.1
Haze_17339 Corylus avellana HOM05D006817 ORTHO05D008603 1.8e-154 550.1 477 66.9
HanXRQChr08g0222561 Helianthus annuus HOM05D006817 ORTHO05D008603 3.8e-152 542.3 514 59.7
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 8.4e-152 541.2 487 61.0
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 2.1e-150 536.6 494 61.5
Zm00001eb406320 Zea mays HOM05D006817 ORTHO05D008603 2.1e-150 536.6 493 60.0
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 3.7e-147 525.8 476 63.7
Ca_12776_v3 Cicer arietinum L. HOM05D006817 ORTHO05D008603 1.8e-146 523.5 323 87.0
CiPaw.02G198400 Carya illinoinensis HOM05D006817 ORTHO05D008603 5.3e-146 521.9 412 69.7
AUR62003430 Chenopodium quinoa HOM05D006817 ORTHO05D008603 1.0e-144 517.7 514 57.6
Lj8A57G58 Lonicera japonica HOM05D006817 ORTHO05D008603 2.5e-143 513.1 408 69.6
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 3.2e-143 512.7 429 65.5
AUR62012358 Chenopodium quinoa HOM05D006817 ORTHO05D008603 2.1e-142 510.0 472 60.8
Aa31LG11G6330 Aethionema arabicum HOM05D006817 ORTHO05D008603 8.8e-141 504.6 491 58.7
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 1.8e-130 470.3 468 58.5
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 1.3e-128 464.2 372 64.8
MD07G1231900 Malus domestica HOM05D006817 ORTHO05D008603 1.2e-121 441.0 365 68.5
AT5G05310 Arabidopsis thaliana HOM05D006817 ORTHO05D008603 5.2e-117 425.6 336 66.4
Pp3c22_2490 Physcomitrium patens HOM05D006817 ORTHO05D008603 1.3e-99 367.9 497 46.5
AUR62031486 Chenopodium quinoa HOM05D006817 ORTHO05D008603 2.2e-99 367.1 498 48.6
VMungo0647G0362 Vigna mungo HOM05D006817 ORTHO05D008603 8.3e-99 365.2 253 77.9
RcHm_v2.0_Chr1g0371891 Rosa chinensis HOM05D006817 ORTHO05D008603 1.6e-94 350.9 254 73.2
Carub.0006s0424 Capsella rubella HOM05D006817 ORTHO05D008603 5.8e-92 342.4 284 63.0
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 1.1e-90 338.2 428 47.9
Nitab4.5_0000109g0530 Nicotiana tabacum HOM05D006817 ORTHO05D008603 3.9e-72 276.6 233 63.1
SEGI_05100 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 1.1e-71 275.0 210 64.8
VMungo0647G0650 Vigna mungo HOM05D006817 ORTHO05D008603 2.1e-70 270.8 205 70.7
MD05G1328700 Malus domestica HOM05D006817 ORTHO05D008603 7.8e-65 252.3 248 62.1
RcHm_v2.0_Chr1g0371881 Rosa chinensis HOM05D006817 ORTHO05D008603 6.2e-62 242.7 162 74.1
MSTRG.24128 Avicennia marina HOM05D006817 ORTHO05D008603 2.4e-58 230.7 165 72.7
QL10p038395 Quercus lobata HOM05D006817 ORTHO05D008603 3.8e-51 206.8 215 59.1
MD07G1231800 Malus domestica HOM05D006817 ORTHO05D008603 3.5e-49 200.3 131 72.5
QL05p063879 Quercus lobata HOM05D006817 ORTHO05D008603 1.1e-39 168.7 153 64.1
Oeu020109.1 Olea europaea HOM05D006817 ORTHO05D008603 5.7e-39 166.4 133 61.7
SEGI_41528 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 9.0e-37 159.1 168 54.8
Cre08.g361000 Chlamydomonas reinhardtii HOM05D006817 ORTHO05D008603 2.5e-34 151.0 490 29.2
QL03p030054 Quercus lobata HOM05D006817 ORTHO05D008603 3.3e-31 140.6 95 80.0
QL06p040335 Quercus lobata HOM05D006817 ORTHO05D008603 2.8e-30 137.5 109 72.5
FvH4_7g25690 Fragaria vesca HOM05D006817 ORTHO05D008603 4.1e-29 133.7 92 75.0
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 1.0e-27 129.0 109 68.8
Hund15836 Selenicereus undatus HOM05D006817 ORTHO05D008603 3.9e-24 117.1 72 79.2
FAN06G4794 Fragaria x ananassa HOM05D006817 ORTHO05D008603 5.1e-24 116.7 77 76.6
QL10p065865 Quercus lobata HOM05D006817 ORTHO05D008603 2.6e-20 104.4 90 66.7
Os11g0112900 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 3.4e-20 104.0 99 58.6
QL08p064573 Quercus lobata HOM05D006817 ORTHO05D008603 3.9e-16 90.5 61 68.9
FAN06G1140 Fragaria x ananassa HOM05D006817 ORTHO05D008603 9.7e-15 85.9 59 76.3
MD17G1183400 Malus domestica HOM05D006817 ORTHO05D008603 1.5e-12 78.6 57 71.9
PGSC0003DMG400024308 Solanum tuberosum HOM05D006817 ORTHO05D008603 1.3e-06 58.9 44 54.5
Prupe.2G262300 Prunus persica HOM05D006817 ORTHO05D008603 1.7e-06 58.5 105 40.0


User provided reference genes

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