Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g031520 Pisum sativum HOM05D006099 ORTHO05D007317 2.8e-92 342.0 185 100.0
Medtr1g010130 Medicago truncatula HOM05D006099 ORTHO05D007317 5.7e-53 211.5 131 78.6
Lj5g0025000 Lotus japonicus HOM05D006099 ORTHO05D007317 1.3e-52 210.3 130 80.0
Ca_27927_v3 Cicer arietinum L. HOM05D006099 ORTHO05D007317 1.6e-52 209.9 131 77.9
VMungo0647G0711 Vigna mungo HOM05D006099 ORTHO05D007317 8.2e-52 207.6 133 77.4
Phvul.001G057000 Phaseolus vulgaris HOM05D006099 ORTHO05D007317 1.4e-51 206.8 137 77.4
Glyma.14G131200 Glycine max HOM05D006099 ORTHO05D007317 7.6e-50 201.1 130 77.7
arahy.Tifrunner.gnm1.ann1.AEW87R Arachis hypogaea HOM05D006099 ORTHO05D007317 1.3e-49 200.3 159 64.8
arahy.Tifrunner.gnm1.ann1.ZJIP4K Arachis hypogaea HOM05D006099 ORTHO05D007317 5.0e-49 198.4 159 64.2
Lalb_Chr24g0402361 Lupinus albus HOM05D006099 ORTHO05D007317 2.3e-46 189.5 138 68.1
Rhsim07G0173500 Rhododendron simsii HOM05D006099 ORTHO05D007317 2.3e-46 189.5 146 62.3
Lsat_1_v5_gn_3_111601 Lactuca sativa HOM05D006099 ORTHO05D007317 6.7e-46 188.0 128 65.6
Actinidia03572 Actinidia chinensis HOM05D006099 ORTHO05D007317 3.3e-45 185.7 132 65.9
Cfa013234 Carpinus fangiana HOM05D006099 ORTHO05D007317 5.7e-45 184.9 132 67.4
Lj7A751T33 Lonicera japonica HOM05D006099 ORTHO05D007317 1.3e-44 183.7 141 63.8
vmacro05090 Vaccinium macrocarpon HOM05D006099 ORTHO05D007317 2.8e-44 182.6 145 60.7
FAN27G0146 Fragaria x ananassa HOM05D006099 ORTHO05D007317 3.7e-44 182.2 144 65.3
FAN15G2948 Fragaria x ananassa HOM05D006099 ORTHO05D007317 3.1e-43 179.1 146 63.7
CSS0007227 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 4.1e-43 178.7 133 64.7
Nn4g25135 Nelumbo nucifera HOM05D006099 ORTHO05D007317 5.3e-43 178.3 134 61.9
GSVIVG01035588001 Vitis vinifera HOM05D006099 ORTHO05D007317 5.3e-43 178.3 144 59.7
FvH4_2g30570 Fragaria vesca HOM05D006099 ORTHO05D007317 1.2e-42 177.2 134 66.4
CSS0009505 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 1.5e-42 176.8 133 65.4
Dinv37480 Davidia involucrata HOM05D006099 ORTHO05D007317 2.0e-42 176.4 137 62.8
Hma1.2p1_1615F.1_g293710 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 2.0e-42 176.4 121 71.1
Cc00_g12770 Coffea canephora HOM05D006099 ORTHO05D007317 7.7e-42 174.5 134 66.4
CAN.G947.18 Capsicum annuum HOM05D006099 ORTHO05D007317 1.3e-41 173.7 130 63.8
Atru.chr7.2710 Acer truncatum HOM05D006099 ORTHO05D007317 1.7e-41 173.3 130 63.8
BcaC04g20481 Brassica carinata HOM05D006099 ORTHO05D007317 2.9e-41 172.6 148 57.4
C09p43040 Brassica napus HOM05D006099 ORTHO05D007317 2.9e-41 172.6 148 57.4
Sopen12g032140 Solanum pennellii HOM05D006099 ORTHO05D007317 5.0e-41 171.8 126 65.9
CANSAT25G1623 Cannabis sativa HOM05D006099 ORTHO05D007317 6.5e-41 171.4 142 60.6
Hund03250 Selenicereus undatus HOM05D006099 ORTHO05D007317 6.5e-41 171.4 142 58.5
BcaB03g12683 Brassica carinata HOM05D006099 ORTHO05D007317 8.5e-41 171.0 133 61.7
BcaC08g44050 Brassica carinata HOM05D006099 ORTHO05D007317 8.5e-41 171.0 148 57.4
AUR62028064 Chenopodium quinoa HOM05D006099 ORTHO05D007317 8.5e-41 171.0 144 57.6
AUR62020668 Chenopodium quinoa HOM05D006099 ORTHO05D007317 1.1e-40 170.6 141 58.2
Solyc12g096280.2 Solanum lycopersicum HOM05D006099 ORTHO05D007317 1.4e-40 170.2 130 63.1
CiPaw.07G216100 Carya illinoinensis HOM05D006099 ORTHO05D007317 2.5e-40 169.5 124 63.7
A08p18780 Brassica napus HOM05D006099 ORTHO05D007317 3.2e-40 169.1 137 60.6
BolC6t36631H Brassica oleracea HOM05D006099 ORTHO05D007317 4.2e-40 168.7 133 60.9
MD08G1132300 Malus domestica HOM05D006099 ORTHO05D007317 4.2e-40 168.7 143 58.7
Nitab4.5_0001159g0110 Nicotiana tabacum HOM05D006099 ORTHO05D007317 4.2e-40 168.7 137 59.9
DCAR_000694 Daucus carota HOM05D006099 ORTHO05D007317 5.5e-40 168.3 137 59.1
AL7G20920 Arabidopsis lyrata HOM05D006099 ORTHO05D007317 7.2e-40 167.9 133 60.9
BraA08t33839Z Brassica rapa HOM05D006099 ORTHO05D007317 7.2e-40 167.9 133 61.7
Manes.15G141100 Manihot esculenta HOM05D006099 ORTHO05D007317 7.2e-40 167.9 129 63.6
PGSC0003DMG400029284 Solanum tuberosum HOM05D006099 ORTHO05D007317 9.4e-40 167.5 121 66.9
BolC3t21124H Brassica oleracea HOM05D006099 ORTHO05D007317 1.2e-39 167.2 134 61.9
AT4G31150 Arabidopsis thaliana HOM05D006099 ORTHO05D007317 1.6e-39 166.8 133 60.2
ECA240G1547 Erigeron canadensis HOM05D006099 ORTHO05D007317 2.7e-39 166.0 138 58.7
C03p88160 Brassica napus HOM05D006099 ORTHO05D007317 3.6e-39 165.6 133 61.7
RcHm_v2.0_Chr6g0312441 Rosa chinensis HOM05D006099 ORTHO05D007317 3.6e-39 165.6 124 65.3
Manes.15G141200 Manihot esculenta HOM05D006099 ORTHO05D007317 4.6e-39 165.2 132 56.8
Sed0006978 Sechium edule HOM05D006099 ORTHO05D007317 4.6e-39 165.2 130 63.1
Ciclev10009104m.g Citrus clementina HOM05D006099 ORTHO05D007317 6.1e-39 164.9 132 58.3
THA.LOC104803891 Tarenaya hassleriana HOM05D006099 ORTHO05D007317 7.9e-39 164.5 134 56.7
Thhalv10025966m.g Eutrema salsugineum HOM05D006099 ORTHO05D007317 2.3e-38 162.9 133 60.2
Sp7g29030 Schrenkiella parvula HOM05D006099 ORTHO05D007317 3.9e-38 162.2 133 57.9
Cpa.g.sc148.13 Carica papaya HOM05D006099 ORTHO05D007317 5.1e-38 161.8 130 60.0
C03p41630 Brassica napus HOM05D006099 ORTHO05D007317 8.8e-38 161.0 139 56.8
Carub.0007s0938 Capsella rubella HOM05D006099 ORTHO05D007317 2.0e-37 159.8 133 57.1
Gohir.D05G068900 Gossypium hirsutum HOM05D006099 ORTHO05D007317 4.4e-37 158.7 134 54.5
Gorai.009G069800 Gossypium raimondii HOM05D006099 ORTHO05D007317 4.4e-37 158.7 134 54.5
Duzib168G0660 Durio zibethinus HOM05D006099 ORTHO05D007317 5.7e-37 158.3 137 56.9
CsaV3_2G031500 Cucumis sativus L. HOM05D006099 ORTHO05D007317 7.4e-37 157.9 131 60.3
Hma1.2p1_1615F.1_g293700 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 7.4e-37 157.9 132 59.1
Os06g0663600 Oryza sativa ssp. japonica HOM05D006099 ORTHO05D007317 7.4e-37 157.9 135 55.6
TWI32G0633 Tripterygium wilfordii HOM05D006099 ORTHO05D007317 1.3e-36 157.1 143 53.8
Oeu035175.2 Olea europaea HOM05D006099 ORTHO05D007317 2.2e-36 156.4 120 63.3
Aa31LG2G19160 Aethionema arabicum HOM05D006099 ORTHO05D007317 3.7e-36 155.6 133 58.6
Gohir.A05G066400 Gossypium hirsutum HOM05D006099 ORTHO05D007317 3.7e-36 155.6 134 53.0
HPP92_011639 Vanilla planifolia HOM05D006099 ORTHO05D007317 6.3e-36 154.8 126 57.9
HanXRQChr13g0419861 Helianthus annuus HOM05D006099 ORTHO05D007317 1.4e-35 153.7 121 61.2
MELO3C011207.2 Cucumis melo HOM05D006099 ORTHO05D007317 3.1e-35 152.5 138 58.0
QL12p030693 Quercus lobata HOM05D006099 ORTHO05D007317 4.1e-35 152.1 134 58.2
QL12p030880 Quercus lobata HOM05D006099 ORTHO05D007317 4.1e-35 152.1 136 57.4
Haze_21663 Corylus avellana HOM05D006099 ORTHO05D007317 5.3e-35 151.8 115 62.6
Prupe.1G463600 Prunus persica HOM05D006099 ORTHO05D007317 6.9e-35 151.4 122 61.5
Thecc.09G001300 Theobroma cacao HOM05D006099 ORTHO05D007317 6.9e-35 151.4 117 60.7
MBI16_g00820_MAGBIO Magnolia biondii HOM05D006099 ORTHO05D007317 1.5e-34 150.2 121 57.9
ATR0626G128 Amborella trichopoda HOM05D006099 ORTHO05D007317 2.6e-34 149.4 134 53.0
PSO170G3285 Papaver somniferum HOM05D006099 ORTHO05D007317 3.4e-34 149.1 148 51.4
Sc23g0004790 Simmondsia chinensis HOM05D006099 ORTHO05D007317 3.4e-34 149.1 138 53.6
Pp3c6_10670 Physcomitrium patens HOM05D006099 ORTHO05D007317 4.5e-34 148.7 137 53.3
ClCG08G012820 Citrullus lanatus HOM05D006099 ORTHO05D007317 5.9e-34 148.3 140 56.4
Mapoly0013s0098 Marchantia polymorpha HOM05D006099 ORTHO05D007317 7.7e-34 147.9 136 54.4
Potri.018G001000 Populus trichocarpa HOM05D006099 ORTHO05D007317 7.7e-34 147.9 151 53.6
Zm00001eb274410 Zea mays HOM05D006099 ORTHO05D007317 7.7e-34 147.9 131 55.0
Zm00001eb274500 Zea mays HOM05D006099 ORTHO05D007317 7.7e-34 147.9 131 55.0
PGR142G3206 Punica granatum HOM05D006099 ORTHO05D007317 1.7e-33 146.7 148 50.0
Sc23g0004430 Simmondsia chinensis HOM05D006099 ORTHO05D007317 2.7e-31 139.4 141 49.6
TPR.G26527 Trifolium pratense HOM05D006099 ORTHO05D007317 6.1e-31 138.3 96 70.8
Zm00001eb274550 Zea mays HOM05D006099 ORTHO05D007317 6.1e-31 138.3 121 56.2
SMO351G0465 Selaginella moellendorffii HOM05D006099 ORTHO05D007317 2.3e-30 136.3 128 47.7
FAN20G1258 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.1e-29 134.0 168 47.6
FAN20G1767 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.1e-29 134.0 168 47.6
SalBow4G2099 Salvia bowleyana HOM05D006099 ORTHO05D007317 4.4e-29 132.1 131 55.7
SGA_v2.0_scaffold27G11694 Striga asiatica HOM05D006099 ORTHO05D007317 5.7e-29 131.7 121 53.7
EL10Ac2g03669 Beta vulgaris HOM05D006099 ORTHO05D007317 2.2e-28 129.8 138 49.3
AagrBONN_evm.TU.Sc2ySwM_228.1579 Anthoceros agrestis HOM05D006099 ORTHO05D007317 2.8e-28 129.4 134 47.8
Sabra18G0005300 Salix brachista HOM05D002037 ORTHO05D002762 1.4e-27 127.1 138 51.4
FAN24G0140 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.6e-26 123.6 84 75.0
Zm00001eb442290 Zea mays HOM05D006099 ORTHO05D007317 4.5e-26 122.1 91 62.6
MSTRG.11825 Avicennia marina HOM05D006099 ORTHO05D007317 4.2e-24 115.5 108 53.7
Eucgr.C02144 Eucalyptus grandis HOM05D006099 ORTHO05D007317 7.2e-24 114.8 133 47.4
Migut.A00463 Erythranthe guttata HOM05D006099 ORTHO05D007317 9.4e-24 114.4 111 55.0
SHI15001 Sapria himalayana HOM05D006099 ORTHO05D007317 9.4e-24 114.4 96 57.3
Peaxi162Scf00876g00025 Petunia axillaris HOM05D006099 ORTHO05D007317 1.4e-22 110.5 130 46.9
TAR626G0599 Trochodendron aralioides HOM05D006099 ORTHO05D007317 9.7e-21 104.4 96 52.1
CBR_g34340 Chara braunii HOM05D006099 ORTHO05D007317 6.3e-20 101.7 91 51.6
Zm00001eb274520 Zea mays HOM05D006099 ORTHO05D007317 7.0e-19 98.2 97 48.5
PSO063G7181 Papaver somniferum HOM05D006099 ORTHO05D007317 9.1e-19 97.8 75 61.3
unitig_32.g10950 Utricularia gibba HOM05D006099 ORTHO05D007317 1.2e-18 97.4 93 54.8
RcHm_v2.0_Chr6g0312501 Rosa chinensis HOM05D006099 ORTHO05D007317 1.0e-17 94.4 66 71.2
MCO10G112 Micromonas commoda HOM05D006099 ORTHO05D007317 3.7e-12 75.9 141 34.0
TPR.G3995 Trifolium pratense HOM05D006099 ORTHO05D007317 1.1e-11 74.3 35 94.3
Ah.11g044160 Amaranthus hybridus HOM05D006099 ORTHO05D007317 9.1e-11 71.2 129 32.6
CDE08G0278 Ceratophyllum demersum HOM05D006099 ORTHO05D007317 1.7e-09 67.0 64 48.4
Cre07.g346100 Chlamydomonas reinhardtii HOM05D006099 ORTHO05D007317 1.5e-08 63.9 75 41.3
HanXRQChr13g0419831 Helianthus annuus HOM05D006099 ORTHO05D007317 5.5e-08 62.0 45 60.0
SalBow8G2774 Salvia bowleyana HOM05D002799 ORTHO05D007076 8.0e-07 58.2 34 70.6


User provided reference genes

Program Settings