Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 1.5e-115 419.5 209 100.0
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 4.2e-89 331.6 195 83.6
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 4.0e-87 325.1 195 83.1
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 5.7e-86 321.2 193 82.4
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 2.7e-67 259.2 200 67.0
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 2.7e-67 259.2 198 65.7
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 1.0e-66 257.3 200 67.0
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 1.5e-65 253.4 195 66.7
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 1.2e-62 243.8 195 65.6
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 2.0e-62 243.0 195 64.6
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 2.9e-61 239.2 195 63.6
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 3.7e-61 238.8 195 63.6
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 1.4e-52 210.3 198 55.1
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 7.1e-52 208.0 199 55.3
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 1.2e-51 207.2 199 54.3
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 2.7e-51 206.1 196 57.7
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 3.5e-51 205.7 198 50.5
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 3.5e-51 205.7 199 55.8
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 7.8e-51 204.5 198 53.0
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 7.8e-51 204.5 198 50.5
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 1.0e-50 204.1 199 55.3
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 1.7e-50 203.4 199 53.3
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 5.1e-50 201.8 199 49.7
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 6.6e-50 201.4 199 51.3
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 1.1e-49 200.7 200 52.5
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 1.9e-49 199.9 196 54.6
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 1.9e-49 199.9 199 55.3
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 4.3e-49 198.7 196 55.6
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 5.6e-49 198.4 200 52.0
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 2.8e-48 196.1 196 53.1
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 3.6e-48 195.7 199 52.8
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 1.1e-47 194.1 199 53.8
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 1.1e-47 194.1 199 55.3
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 3.1e-47 192.6 199 53.8
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 4.0e-47 192.2 196 51.5
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 5.2e-47 191.8 196 52.6
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 5.2e-47 191.8 195 49.2
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.5e-46 190.3 196 51.5
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.2e-45 186.4 199 53.8
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 2.9e-45 186.0 196 51.0
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 4.9e-45 185.3 199 46.2
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 8.4e-45 184.5 199 53.3
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 8.4e-45 184.5 199 53.3
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 8.4e-45 184.5 199 48.2
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 1.4e-44 183.7 196 48.5
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 5.4e-44 181.8 198 48.5
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 5.4e-44 181.8 199 52.8
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 5.4e-44 181.8 195 47.2
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 9.2e-44 181.0 195 47.2
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 9.2e-44 181.0 195 47.2
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 5.1e-42 175.3 195 45.6
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 1.1e-41 174.1 196 48.0
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 1.1e-41 174.1 196 48.5
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 1.9e-41 173.3 195 46.7
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 3.3e-41 172.6 196 48.5
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 3.3e-41 172.6 198 48.5
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 7.3e-41 171.4 195 46.2
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 7.3e-41 171.4 195 46.7
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 9.6e-41 171.0 195 45.6
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 1.6e-40 170.2 195 44.6
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 1.6e-40 170.2 198 47.0
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 2.1e-40 169.9 197 45.7
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 2.1e-40 169.9 196 47.4
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 2.1e-40 169.9 198 48.0
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 2.8e-40 169.5 195 46.7
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 8.1e-40 167.9 197 47.7
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.4e-39 167.2 196 46.9
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 1.8e-39 166.8 197 45.2
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 1.8e-39 166.8 197 45.7
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 3.1e-39 166.0 198 46.5
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 2.0e-38 163.3 199 43.7
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 2.6e-38 162.9 197 45.7
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 3.4e-38 162.5 197 44.7
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 3.4e-38 162.5 196 43.9
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 4.4e-38 162.2 201 45.3
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 4.4e-38 162.2 166 53.6
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 5.8e-38 161.8 202 45.5
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 7.6e-38 161.4 195 44.6
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 1.3e-37 160.6 201 45.8
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 4.9e-37 158.7 196 46.9
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 8.4e-37 157.9 167 49.1
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.4e-36 156.4 172 52.9
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 3.2e-36 156.0 196 44.4
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 4.2e-36 155.6 192 47.4
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 5.4e-36 155.2 191 46.6
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 9.3e-36 154.5 197 45.2
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 1.6e-35 153.7 191 46.6
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 2.7e-35 152.9 197 42.1
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 2.7e-35 152.9 195 44.6
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 3.5e-35 152.5 197 45.2
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 4.6e-35 152.1 205 42.4
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 1.0e-34 151.0 192 44.8
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 2.3e-34 149.8 192 45.8
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 3.9e-34 149.1 165 49.1
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 5.1e-34 148.7 192 44.8
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 6.6e-34 148.3 196 42.9
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 8.7e-34 147.9 192 44.8
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 1.1e-33 147.5 208 39.9
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 1.1e-33 147.5 201 40.8
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 1.5e-33 147.1 191 46.1
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 1.5e-33 147.1 138 54.3
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 3.3e-33 146.0 202 40.1
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 3.3e-33 146.0 191 44.0
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 3.3e-33 146.0 146 50.0
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 9.6e-33 144.4 197 42.6
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 1.3e-32 144.1 194 43.3
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 4.8e-32 142.1 206 40.3
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 8.1e-32 141.4 195 43.1
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 6.9e-31 138.3 197 40.1
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 1.5e-30 137.1 195 40.5
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 1.3e-29 134.0 221 38.5
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 3.8e-29 132.5 174 42.5
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 1.3e-24 117.5 208 39.4
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 2.9e-21 106.3 194 38.7
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 6.5e-21 105.1 111 45.0
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 1.1e-17 94.4 206 30.6
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 4.3e-17 92.4 200 28.0
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 6.2e-16 88.6 193 30.1
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 2.4e-15 86.7 193 31.6
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 4.2e-12 75.9 71 50.7
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 3.3e-09 66.2 87 42.5


User provided reference genes

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