Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 6.3e-117 424.1 209 100.0
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 3.5e-99 365.2 210 87.1
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 1.5e-97 359.8 210 85.7
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 5.3e-92 341.3 210 82.4
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 2.0e-75 286.2 220 70.0
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 2.3e-66 256.1 207 65.2
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 3.4e-62 242.3 208 61.5
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 3.4e-62 242.3 207 61.4
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 4.4e-62 241.9 212 63.2
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 4.4e-62 241.9 213 63.8
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 5.4e-60 235.0 209 59.3
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 1.2e-59 233.8 211 60.7
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 3.5e-59 232.3 200 58.5
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 6.0e-59 231.5 207 60.4
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 6.0e-59 231.5 207 60.4
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 6.0e-59 231.5 201 59.7
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 7.8e-59 231.1 208 59.6
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 7.8e-59 231.1 207 61.4
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.1e-57 227.3 207 59.4
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 5.6e-57 224.9 204 59.8
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 7.3e-57 224.6 208 59.1
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 4.7e-56 221.9 207 56.5
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 6.8e-55 218.0 204 56.9
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 1.2e-54 217.2 214 56.1
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 4.9e-53 211.8 201 57.2
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 1.1e-52 210.7 205 56.6
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 1.2e-51 207.2 208 57.2
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.6e-51 206.8 207 57.5
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 2.1e-51 206.5 209 55.0
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 2.1e-51 206.5 209 55.0
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 2.1e-51 206.5 203 53.7
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 2.3e-50 203.0 208 54.8
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 3.9e-50 202.2 208 54.8
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 6.6e-50 201.4 208 54.3
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 9.5e-49 197.6 202 53.5
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 9.5e-49 197.6 208 56.2
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 9.5e-49 197.6 207 53.6
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.2e-48 197.2 208 56.2
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 2.1e-48 196.4 208 51.0
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 2.8e-48 196.1 202 52.5
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 6.2e-48 194.9 208 51.0
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 6.2e-48 194.9 208 51.9
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 1.2e-46 190.7 201 52.7
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.5e-46 190.3 217 51.6
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 2.0e-46 189.9 203 52.2
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 2.6e-46 189.5 197 52.8
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 2.6e-46 189.5 210 54.3
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 7.6e-46 188.0 209 53.1
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 9.9e-46 187.6 202 51.0
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 9.9e-46 187.6 201 49.8
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 1.7e-45 186.8 219 51.1
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 4.9e-45 185.3 203 51.2
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 6.4e-45 184.9 202 51.0
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 2.3e-42 176.4 150 60.7
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 1.5e-41 173.7 211 44.5
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 1.6e-40 170.2 208 46.2
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 2.1e-40 169.9 213 47.9
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 6.2e-40 168.3 207 43.5
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 6.2e-40 168.3 198 47.0
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 1.1e-39 167.5 207 45.4
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 1.8e-39 166.8 215 48.4
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 2.6e-38 162.9 218 45.4
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 2.6e-38 162.9 204 47.1
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 5.8e-38 161.8 217 44.7
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 1.3e-37 160.6 202 48.0
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 1.3e-37 160.6 213 46.5
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 1.3e-37 160.6 210 46.2
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 1.3e-37 160.6 204 47.1
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 4.9e-37 158.7 198 46.0
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 8.4e-37 157.9 201 45.3
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 4.2e-36 155.6 203 46.3
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 9.3e-36 154.5 228 41.7
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.2e-35 154.1 213 44.1
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 3.5e-35 152.5 200 45.5
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 1.0e-34 151.0 230 42.6
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 4.3e-33 145.6 148 54.1
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 9.6e-33 144.4 220 46.8
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 9.6e-33 144.4 220 46.8
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 1.3e-32 144.1 200 46.5
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 3.6e-32 142.5 197 41.6
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 6.2e-32 141.7 215 44.7
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 8.1e-32 141.4 191 45.5
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 1.4e-31 140.6 194 44.8
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 2.6e-30 136.3 195 41.0
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 6.4e-29 131.7 199 43.2
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 5.4e-28 128.6 190 42.1
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 9.3e-28 127.9 191 41.9
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 9.3e-28 127.9 198 37.9
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 2.1e-27 126.7 191 40.3
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 3.5e-27 125.9 178 42.7
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 3.5e-27 125.9 217 39.6
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 7.9e-27 124.8 191 41.4
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 7.9e-27 124.8 206 41.3
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 1.8e-26 123.6 191 42.4
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 2.3e-26 123.2 207 39.1
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 3.9e-26 122.5 200 41.5
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 5.1e-26 122.1 199 42.2
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 2.5e-25 119.8 187 41.2
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 2.5e-25 119.8 187 41.2
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 3.3e-25 119.4 165 45.5
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 5.6e-25 118.6 208 37.0
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 7.4e-25 118.2 203 41.4
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 4.8e-24 115.5 168 45.8
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 1.8e-23 113.6 199 37.7
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 3.1e-23 112.8 158 41.8
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 3.1e-23 112.8 221 36.7
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 4.0e-23 112.5 208 41.8
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 5.3e-23 112.1 176 40.3
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 9.0e-23 111.3 200 37.0
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 2.2e-21 106.7 123 48.8
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 2.9e-21 106.3 210 35.2
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 6.5e-21 105.1 129 44.2
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 1.4e-20 104.0 200 38.0
Duzib093G2157 Durio zibethinus HOM05D006157 ORTHO05D007826 7.4e-17 91.7 94 52.1
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 6.2e-16 88.6 319 27.3
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 2.2e-13 80.1 169 36.1
ATR0100G061 Amborella trichopoda HOM05D006157 ORTHO05D007826 2.5e-12 76.6 169 35.5
FvH4_2g34701 Fragaria vesca HOM05D006157 ORTHO05D007826 1.6e-11 73.9 113 43.4
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 3.3e-09 66.2 225 27.1
unitig_22.g6773 Utricularia gibba HOM05D006157 ORTHO05D007826 7.4e-09 65.1 170 31.2
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 1.4e-07 60.8 86 40.7
SalBow8G4867 Salvia bowleyana HOM05D006157 ORTHO05D007826 1.0e-05 54.7 27 81.5


User provided reference genes

Program Settings