Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat6g006920 Pisum sativum HOM05D007089 ORTHO05D008959 4.5e-247 857.4 424 100.0
TPR.G15730 Trifolium pratense HOM05D007089 ORTHO05D008959 5.4e-216 754.2 429 87.2
Medtr1g021985 Medicago truncatula HOM05D007089 ORTHO05D008959 7.0e-208 727.2 424 83.3
Ca_13340_v3 Cicer arietinum L. HOM05D007089 ORTHO05D008959 2.9e-201 705.3 438 80.4
Glyma.14G077000 Glycine max HOM05D007089 ORTHO05D008959 1.1e-176 623.6 432 72.7
Lalb_Chr14g0369091 Lupinus albus HOM05D007089 ORTHO05D008959 6.6e-174 614.4 423 70.4
VMungo0647G2017 Vigna mungo HOM05D007089 ORTHO05D008959 1.5e-162 576.6 425 68.2
arahy.Tifrunner.gnm1.ann1.4B2PQ4 Arachis hypogaea HOM05D007089 ORTHO05D008959 2.2e-161 572.8 430 69.3
arahy.Tifrunner.gnm1.ann1.K9WZZ6 Arachis hypogaea HOM05D007089 ORTHO05D008959 1.4e-147 526.9 430 65.3
Phvul.001G016200 Phaseolus vulgaris HOM05D007089 ORTHO05D008959 3.0e-142 509.2 380 68.9
CSS0000683 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 3.8e-137 492.3 428 59.6
Cfa018438 Carpinus fangiana HOM05D007089 ORTHO05D008959 3.2e-136 489.2 421 59.6
Manes.05G163100 Manihot esculenta HOM05D007089 ORTHO05D008959 2.7e-135 486.1 424 59.4
Hma1.2p1_0203F.1_g086680 Hydrangea macrophylla HOM05D007089 ORTHO05D008959 4.7e-135 485.3 427 57.6
Gorai.010G011900 Gossypium raimondii HOM05D007089 ORTHO05D008959 1.0e-134 484.2 419 58.2
Prupe.1G383100 Prunus persica HOM05D007089 ORTHO05D008959 2.3e-134 483.0 425 59.1
COL.COLO4_26368 Corchorus olitorius HOM05D007089 ORTHO05D008959 6.7e-134 481.5 422 58.5
Gohir.D06G009100 Gossypium hirsutum HOM05D007089 ORTHO05D008959 8.8e-134 481.1 419 57.5
Lj5g0009638 Lotus japonicus HOM05D007089 ORTHO05D008959 2.8e-132 476.1 358 71.2
Gohir.A06G011700 Gossypium hirsutum HOM05D007089 ORTHO05D008959 1.1e-131 474.2 423 57.9
PGSC0003DMG400027847 Solanum tuberosum HOM05D007089 ORTHO05D008959 1.8e-131 473.4 426 56.8
Nitab4.5_0005314g0050 Nicotiana tabacum HOM05D007089 ORTHO05D008959 4.1e-131 472.2 424 57.5
PGR083G0581 Punica granatum HOM05D007089 ORTHO05D008959 5.3e-131 471.9 416 57.2
Sopen04g033530 Solanum pennellii HOM05D007089 ORTHO05D008959 7.0e-131 471.5 424 56.1
CANSAT25G1057 Cannabis sativa HOM05D007089 ORTHO05D008959 9.1e-131 471.1 429 56.2
Atru.chr13.537 Acer truncatum HOM05D007089 ORTHO05D008959 1.5e-130 470.3 411 58.2
Ciclev10001360m.g Citrus clementina HOM05D007089 ORTHO05D008959 5.9e-130 468.4 415 58.6
GSVIVG01009652001 Vitis vinifera HOM05D007089 ORTHO05D008959 1.0e-129 467.6 419 58.7
MD04G1062700 Malus domestica HOM05D007089 ORTHO05D008959 1.3e-129 467.2 429 58.3
CiPaw.09G208600 Carya illinoinensis HOM05D007089 ORTHO05D008959 1.1e-128 464.2 422 58.1
Oeu015592.2 Olea europaea HOM05D007089 ORTHO05D008959 1.1e-128 464.2 447 55.0
FvH4_2g40230 Fragaria vesca HOM05D007089 ORTHO05D008959 2.5e-128 463.0 423 58.6
Lj4A43T59 Lonicera japonica HOM05D007089 ORTHO05D008959 4.7e-127 458.8 426 54.7
FAN15G3100 Fragaria x ananassa HOM05D007089 ORTHO05D008959 3.0e-126 456.1 431 57.8
Potri.014G041400 Populus trichocarpa HOM05D007089 ORTHO05D008959 8.8e-126 454.5 420 55.0
CAN.G1126.18 Capsicum annuum HOM05D007089 ORTHO05D008959 1.1e-125 454.1 434 56.0
PSO700G0257 Papaver somniferum HOM05D007089 ORTHO05D008959 1.1e-125 454.1 430 56.3
RcHm_v2.0_Chr6g0300531 Rosa chinensis HOM05D007089 ORTHO05D008959 1.5e-125 453.8 418 58.1
Migut.N00515 Erythranthe guttata HOM05D007089 ORTHO05D008959 3.3e-125 452.6 420 53.3
Sc02g0006440 Simmondsia chinensis HOM05D007089 ORTHO05D008959 2.8e-124 449.5 430 56.0
HanXRQChr14g0437051 Helianthus annuus HOM05D007089 ORTHO05D008959 8.2e-124 448.0 420 55.2
Aqoxy5G01701 Aquilegia oxysepala HOM05D007089 ORTHO05D008959 1.1e-123 447.6 421 53.4
PSO170G0803 Papaver somniferum HOM05D007089 ORTHO05D008959 1.1e-123 447.6 422 56.6
Nn1g05102 Nelumbo nucifera HOM05D007089 ORTHO05D008959 2.6e-122 443.0 420 55.2
QL02p007525 Quercus lobata HOM05D007089 ORTHO05D008959 3.5e-122 442.6 542 47.0
PSO832G2704 Papaver somniferum HOM05D007089 ORTHO05D008959 7.7e-122 441.4 430 55.1
Haze_17627 Corylus avellana HOM05D007089 ORTHO05D008959 2.2e-121 439.9 421 56.3
Solyc04g079950.4 Solanum lycopersicum HOM05D007089 ORTHO05D008959 2.2e-121 439.9 409 56.2
MSTRG.22295 Avicennia marina HOM05D007089 ORTHO05D008959 2.9e-121 439.5 434 53.2
Sp1g17250 Schrenkiella parvula HOM05D007089 ORTHO05D008959 4.2e-120 435.6 421 54.2
AL1G31930 Arabidopsis lyrata HOM05D007089 ORTHO05D008959 9.4e-120 434.5 421 53.4
Eucgr.F01540 Eucalyptus grandis HOM05D007089 ORTHO05D008959 9.4e-120 434.5 426 52.1
THA.LOC104809053 Tarenaya hassleriana HOM05D007089 ORTHO05D008959 1.2e-119 434.1 421 56.3
SGA_v2.0_scaffold33G13513 Striga asiatica HOM05D007089 ORTHO05D008959 8.0e-119 431.4 437 51.9
Cc10_g03320 Coffea canephora HOM05D007089 ORTHO05D008959 1.8e-118 430.3 425 55.1
AUR62025603 Chenopodium quinoa HOM05D007089 ORTHO05D008959 4.0e-118 429.1 463 51.8
Peaxi162Scf00057g00723 Petunia axillaris HOM05D007089 ORTHO05D008959 4.0e-118 429.1 426 54.9
TAR381G0661 Trochodendron aralioides HOM05D007089 ORTHO05D008959 5.2e-118 428.7 430 51.9
Rhsim07G0236000 Rhododendron simsii HOM05D007089 ORTHO05D008959 1.5e-117 427.2 479 50.3
BolC5t30479H Brassica oleracea HOM05D007089 ORTHO05D008959 4.4e-117 425.6 425 52.0
A06p15500 Brassica napus HOM05D007089 ORTHO05D008959 9.7e-117 424.5 421 51.5
Ah.08g217460 Amaranthus hybridus HOM05D007089 ORTHO05D008959 2.2e-116 423.3 439 50.6
SalBow8G1187 Salvia bowleyana HOM05D007089 ORTHO05D008959 2.2e-116 423.3 451 50.6
SalBow8G1554 Salvia bowleyana HOM05D007089 ORTHO05D008959 2.2e-116 423.3 451 50.6
AT1G19340 Arabidopsis thaliana HOM05D007089 ORTHO05D008959 2.8e-116 422.9 423 52.7
Aa31LG7G4040 Aethionema arabicum HOM05D007089 ORTHO05D008959 3.7e-116 422.5 422 54.5
BraA06t24662Z Brassica rapa HOM05D007089 ORTHO05D008959 4.8e-116 422.2 421 51.5
Thhalv10007768m.g Eutrema salsugineum HOM05D007089 ORTHO05D008959 3.1e-115 419.5 423 53.7
C05p17740 Brassica napus HOM05D007089 ORTHO05D008959 7.0e-115 418.3 421 50.8
ClCG08G015310 Citrullus lanatus HOM05D007089 ORTHO05D008959 2.0e-114 416.8 428 51.6
Duzib041G0709 Durio zibethinus HOM05D007089 ORTHO05D008959 2.7e-114 416.4 417 53.0
Cpa.g.sc64.54 Carica papaya HOM05D007089 ORTHO05D008959 1.3e-113 414.1 327 62.7
Carub.0001s1893 Capsella rubella HOM05D007089 ORTHO05D008959 8.5e-113 411.4 426 50.7
ATR0733G253 Amborella trichopoda HOM05D007089 ORTHO05D008959 3.6e-111 406.0 426 50.5
BcaB07g31960 Brassica carinata HOM05D007089 ORTHO05D008959 1.8e-110 403.7 423 49.9
vmacro04507 Vaccinium macrocarpon HOM05D007089 ORTHO05D008959 1.2e-109 401.0 444 49.8
Nitab4.5_0000110g0230 Nicotiana tabacum HOM05D007089 ORTHO05D008959 2.8e-108 396.4 374 56.4
HPP92_020401 Vanilla planifolia HOM05D007089 ORTHO05D008959 1.6e-106 390.6 419 49.2
Sabra14G0030300 Salix brachista HOM05D007089 ORTHO05D008959 2.7e-106 389.8 372 54.3
DCAR_008774 Daucus carota HOM05D007089 ORTHO05D008959 5.2e-102 375.6 382 52.9
CARHR019930 Cardamine hirsuta HOM05D007089 ORTHO05D008959 4.9e-100 369.0 370 50.8
AUR62001387 Chenopodium quinoa HOM05D007089 ORTHO05D008959 5.4e-99 365.5 446 48.0
Os03g0198900 Oryza sativa ssp. japonica HOM05D007089 ORTHO05D008959 1.2e-98 364.4 429 47.6
EL10Ac7g18245 Beta vulgaris HOM05D007089 ORTHO05D008959 6.6e-97 358.6 442 48.2
unitig_8.g3115 Utricularia gibba HOM05D007089 ORTHO05D008959 4.3e-96 355.9 402 45.5
MBI16_g26378_MAGBIO Magnolia biondii HOM05D007089 ORTHO05D008959 5.2e-94 349.0 438 45.2
Lsat_1_v5_gn_5_30021 Lactuca sativa HOM05D007089 ORTHO05D008959 8.6e-89 331.6 374 49.5
CsaV3_2G028500 Cucumis sativus L. HOM05D007089 ORTHO05D008959 1.2e-87 327.8 335 52.2
ECA246G5250 Erigeron canadensis HOM05D007089 ORTHO05D008959 2.8e-87 326.6 357 50.7
Zm00001eb007930 Zea mays HOM05D007089 ORTHO05D008959 4.7e-87 325.9 428 43.7
Mapoly0005s0290 Marchantia polymorpha HOM05D007089 ORTHO05D008959 1.2e-82 311.2 431 43.4
CDE02G1565 Ceratophyllum demersum HOM05D007089 ORTHO05D008959 1.5e-77 294.3 400 41.2
SEGI_17198 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 4.4e-77 292.7 423 41.1
FAN20G0063 Fragaria x ananassa HOM05D007089 ORTHO05D008959 1.1e-75 288.1 345 51.0
Pp3c10_21330 Physcomitrium patens HOM05D007089 ORTHO05D008959 1.4e-70 271.2 250 50.0
SEGI_08195 Sequoiadendron giganteum HOM05D007089 ORTHO05D008959 1.4e-67 261.2 347 43.5
Actinidia29839 Actinidia chinensis HOM05D007089 ORTHO05D008959 3.2e-59 233.4 355 40.8
BcaNung07258 Brassica carinata HOM05D000817 ORTHO05D008959 3.5e-58 229.9 161 66.5
Actinidia38023 Actinidia chinensis HOM05D007089 ORTHO05D008959 2.8e-55 220.3 309 41.4
SMO358G0064 Selaginella moellendorffii HOM05D007089 ORTHO05D008959 7.1e-51 205.7 193 47.7
CBR_g34449 Chara braunii HOM05D007089 ORTHO05D008959 1.8e-49 201.1 448 29.7
Thecc.01G286100 Theobroma cacao HOM05D007089 ORTHO05D008959 3.1e-46 190.3 229 53.7
AagrBONN_evm.TU.Sc2ySwM_228.1009 Anthoceros agrestis HOM05D007089 ORTHO05D008959 1.4e-35 154.8 130 53.1
MELO3C010924.2 Cucumis melo HOM05D007089 ORTHO05D008959 9.7e-32 142.1 237 38.4
Glyma.17G248801 Glycine max HOM05D007089 ORTHO05D008959 1.1e-30 138.7 83 77.1
FAN27G0845 Fragaria x ananassa HOM05D007089 ORTHO05D008959 6.3e-23 112.8 166 48.8
CSS0043770 Camellia sinensis var. sinensis HOM05D007089 ORTHO05D008959 1.5e-16 91.7 148 39.9
Cfa025491 Carpinus fangiana HOM05D007089 ORTHO05D008959 1.7e-15 88.2 238 27.3
Sed0025576 Sechium edule HOM05D007089 ORTHO05D008959 1.1e-14 85.5 67 53.7
Thecc.08G022600 Theobroma cacao HOM05D007089 ORTHO05D008959 6.1e-10 69.7 117 40.2
CAN.G851.44 Capsicum annuum HOM05D007089 ORTHO05D005305 1.8e-09 68.2 103 53.4


User provided reference genes

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