Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g307600 Pisum sativum HOM05D019876 ORTHO05D023085 1.3e-203 713.4 541 100.0
Psat5g307640 Pisum sativum HOM05D000036 ORTHO05D023085 1.0e-46 192.2 285 42.1
Psat5g307480 Pisum sativum HOM05D000036 ORTHO05D023085 7.7e-42 176.0 277 40.4
Psat5g307240 Pisum sativum HOM05D000036 ORTHO05D005472 2.1e-31 141.4 245 36.7
Psat5g307320 Pisum sativum HOM05D000036 ORTHO05D023085 8.8e-30 136.0 236 39.4
Medtr2g105560 Medicago truncatula HOM05D000036 ORTHO05D005472 1.7e-20 105.1 69 72.5
TPR.G31782 Trifolium pratense HOM05D000036 ORTHO05D005472 4.9e-20 103.6 245 32.2
Medtr7g107180 Medicago truncatula HOM05D000036 ORTHO05D005472 3.1e-19 100.9 69 71.0
Psat5g307440 Pisum sativum HOM05D019876 ORTHO05D321062 5.4e-19 100.1 126 71.4
Ca_01003_v3 Cicer arietinum L. HOM05D001467 ORTHO05D001447 9.2e-19 99.4 69 71.0
VMungo1080G0834 Vigna mungo HOM05D000036 ORTHO05D005472 1.0e-17 95.9 68 66.2
Phvul.005G184400 Phaseolus vulgaris HOM05D000036 ORTHO05D005472 1.5e-16 92.0 69 63.8
arahy.Tifrunner.gnm1.ann1.H7UR3I Arachis hypogaea HOM05D000036 ORTHO05D005472 9.5e-16 89.4 61 67.2
arahy.Tifrunner.gnm1.ann1.U65F6Q Arachis hypogaea HOM05D000036 ORTHO05D005472 2.1e-15 88.2 61 65.6
Psat5g307360 Pisum sativum HOM05D019876 ORTHO05D023085 3.6e-15 87.4 140 55.7
Glyma.15G001800 Glycine max HOM05D000036 ORTHO05D005472 6.1e-15 86.7 69 62.3
Psat5g307400 Pisum sativum HOM05D000036 ORTHO05D023085 1.4e-14 85.5 43 83.7
Ciclev10003299m.g Citrus clementina HOM05D000036 ORTHO05D005472 1.1e-08 65.9 58 48.3
COL.COLO4_16776 Corchorus olitorius HOM05D000036 ORTHO05D005472 1.9e-08 65.1 66 45.5
Hma1.2p1_1587F.1_g292230 Hydrangea macrophylla HOM05D000036 ORTHO05D005472 7.3e-08 63.2 64 43.8
Cc07_g20280 Coffea canephora HOM05D000036 ORTHO05D005472 1.2e-07 62.4 62 41.9
Hma1.2p1_2307F.1_g319420 Hydrangea macrophylla HOM05D000036 ORTHO05D005472 1.2e-07 62.4 58 46.6
Cc00_g32140 Coffea canephora HOM05D000036 ORTHO05D005472 1.6e-07 62.0 62 43.5
Hma1.2p1_1891F.1_g306700 Hydrangea macrophylla HOM05D000036 ORTHO05D005472 1.6e-07 62.0 64 45.3
Hma1.2p1_3929F.1_g337980 Hydrangea macrophylla HOM05D000036 ORTHO05D005472 2.8e-07 61.2 69 43.5
Ciclev10003723m.g Citrus clementina HOM05D000036 ORTHO05D005472 6.2e-07 60.1 63 39.7
Ciclev10003835m.g Citrus clementina HOM05D000036 ORTHO05D005472 6.2e-07 60.1 63 39.7
PSO407G0037 Papaver somniferum HOM05D000036 ORTHO05D001038 1.8e-06 58.5 55 47.3
Lsat_1_v5_gn_3_23241 Lactuca sativa HOM05D000036 ORTHO05D000095 2.3e-06 58.2 59 45.8
PSO675G5371 Papaver somniferum HOM05D000036 ORTHO05D000095 3.1e-06 57.8 55 50.9
SGA_v2.0_scaffold56G19992 Striga asiatica HOM05D000036 ORTHO05D000095 3.1e-06 57.8 65 41.5
PSO170G5610 Papaver somniferum HOM05D000036 ORTHO05D001038 4.0e-06 57.4 52 48.1
DCAR_001695 Daucus carota HOM05D000036 ORTHO05D000095 5.2e-06 57.0 61 47.5
DCAR_002138 Daucus carota HOM05D000036 ORTHO05D002265 6.8e-06 56.6 57 43.9
Hma1.2p1_0233F.1_g098020 Hydrangea macrophylla HOM05D000036 ORTHO05D002265 6.8e-06 56.6 57 45.6
Hund08910 Selenicereus undatus HOM05D000036 ORTHO05D000095 6.8e-06 56.6 59 45.8
vmacro07784 Vaccinium macrocarpon HOM05D000036 ORTHO05D005472 6.8e-06 56.6 70 40.0
Actinidia18001 Actinidia chinensis HOM05D000036 ORTHO05D005472 8.9e-06 56.2 59 47.5
Actinidia18042 Actinidia chinensis HOM05D000036 ORTHO05D005472 8.9e-06 56.2 59 47.5
Lj7A490T62 Lonicera japonica HOM05D000036 ORTHO05D002265 8.9e-06 56.2 57 45.6
QL09p017513 Quercus lobata HOM05D000036 ORTHO05D001038 8.9e-06 56.2 59 42.4


User provided reference genes

Program Settings