Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g301160 Pisum sativum HOM05D007863 ORTHO05D009265 7.8e-50 200.3 111 100.0
TPR.G37228 Trifolium pratense HOM05D007863 ORTHO05D009265 1.4e-30 136.3 102 81.4
Medtr2g103440 Medicago truncatula HOM05D007863 ORTHO05D009265 1.5e-29 132.9 99 79.8
Ca_01070_v3 Cicer arietinum L. HOM05D007863 ORTHO05D009265 2.1e-18 95.9 102 62.7
Lalb_Chr14g0373721 Lupinus albus HOM05D007863 ORTHO05D009265 4.8e-15 84.7 105 56.2
arahy.Tifrunner.gnm1.ann1.JQ3RYK Arachis hypogaea HOM05D007863 ORTHO05D009265 8.2e-15 84.0 86 60.5
RcHm_v2.0_Chr2g0136401 Rosa chinensis HOM05D007863 ORTHO05D009265 1.2e-13 80.1 99 49.5
Lj3g0006922 Lotus japonicus HOM05D007863 ORTHO05D009265 1.5e-13 79.7 93 60.2
FAN05G0465 Fragaria x ananassa HOM05D007863 ORTHO05D009265 1.3e-12 76.6 100 52.0
FvH4_6g30170 Fragaria vesca HOM05D007863 ORTHO05D009265 1.7e-12 76.3 100 51.0
FAN14G0247 Fragaria x ananassa HOM05D007863 ORTHO05D009265 1.7e-12 76.3 100 51.0
Lj3g0003830 Lotus japonicus HOM05D007863 ORTHO05D009265 1.7e-12 76.3 80 56.2
FAN09G3905 Fragaria x ananassa HOM05D007863 ORTHO05D009265 3.8e-12 75.1 100 53.0
FAN02G1499 Fragaria x ananassa HOM05D007863 ORTHO05D009265 5.0e-12 74.7 100 51.0
PGR102G1764 Punica granatum HOM05D007863 ORTHO05D009265 1.1e-11 73.6 46 80.4
MD17G1207500 Malus domestica HOM05D007863 ORTHO05D009265 3.2e-11 72.0 99 48.5
TPR.G38680 Trifolium pratense HOM05D007863 ORTHO05D009265 4.2e-11 71.6 82 54.9
Psat7g256040 Pisum sativum HOM05D007863 ORTHO05D009265 9.4e-11 70.5 53 71.7
Glyma.07G031800 Glycine max HOM05D007863 ORTHO05D009265 2.7e-10 68.9 80 50.0
Medtr4g011030 Medicago truncatula HOM05D007863 ORTHO05D009265 3.6e-10 68.6 82 57.3
Glyma.15G009600 Glycine max HOM05D007863 ORTHO05D009265 7.9e-10 67.4 63 60.3
Glyma.08G211000 Glycine max HOM05D007863 ORTHO05D009265 1.0e-09 67.0 68 54.4
QL05p028236 Quercus lobata HOM05D007863 ORTHO05D009265 1.0e-09 67.0 52 65.4
Glyma.13G364100 Glycine max HOM05D007863 ORTHO05D009265 1.8e-09 66.2 77 57.1
Prupe.3G082000 Prunus persica HOM05D007863 ORTHO05D009265 3.0e-09 65.5 110 43.6
Ciclev10027122m.g Citrus clementina HOM05D007863 ORTHO05D009265 3.9e-09 65.1 61 62.3
Gohir.A10G075500 Gossypium hirsutum HOM05D007863 ORTHO05D009265 3.9e-09 65.1 60 56.7
Lalb_Chr04g0262451 Lupinus albus HOM05D007863 ORTHO05D009265 3.9e-09 65.1 102 51.0
CANSAT56G0457 Cannabis sativa HOM05D007863 ORTHO05D009265 5.1e-09 64.7 45 73.3
Sabra03G0036200 Salix brachista HOM05D007863 ORTHO05D009265 1.1e-08 63.5 50 68.0
Solyc03g116510.1 Solanum lycopersicum HOM05D007863 ORTHO05D009265 1.5e-08 63.2 44 68.2
Sopen03g035400 Solanum pennellii HOM05D007863 ORTHO05D009265 1.5e-08 63.2 44 68.2
Gohir.D10G076000 Gossypium hirsutum HOM05D007863 ORTHO05D009265 1.9e-08 62.8 109 43.1
Gorai.011G081800 Gossypium raimondii HOM05D007863 ORTHO05D009265 1.9e-08 62.8 109 43.1
Phvul.005G176000 Phaseolus vulgaris HOM05D007863 ORTHO05D009265 2.5e-08 62.4 77 51.9
CiPaw.01G245400 Carya illinoinensis HOM05D007863 ORTHO05D009265 3.3e-08 62.0 83 48.2
Nitab4.5_0001764g0040 Nicotiana tabacum HOM05D007863 ORTHO05D009265 3.3e-08 62.0 109 40.4
Haze_16524 Corylus avellana HOM05D007863 ORTHO05D009265 4.3e-08 61.6 104 43.3
Lalb_Chr25g0279481 Lupinus albus HOM05D007863 ORTHO05D009265 4.3e-08 61.6 107 43.9
Cfa001994 Carpinus fangiana HOM05D007863 ORTHO05D009265 5.7e-08 61.2 89 47.2
arahy.Tifrunner.gnm1.ann1.YMK8B4 Arachis hypogaea HOM05D007863 ORTHO05D009265 1.3e-07 60.1 48 68.8
EL10Ac9g21922 Beta vulgaris HOM05D007863 ORTHO05D009265 1.3e-07 60.1 62 51.6
CSS0005162 Camellia sinensis var. sinensis HOM05D007863 ORTHO05D009265 1.3e-07 60.1 44 65.9
Potri.001G171701 Populus trichocarpa HOM05D007863 ORTHO05D009265 1.3e-07 60.1 76 48.7
SalBow2G0248 Salvia bowleyana HOM05D007863 ORTHO05D009265 1.3e-07 60.1 53 56.6
Thecc.06G070300 Theobroma cacao HOM05D007863 ORTHO05D009265 1.3e-07 60.1 99 43.4
COL.COLO4_12919 Corchorus olitorius HOM05D007863 ORTHO05D009265 1.7e-07 59.7 99 42.4
Manes.11G054000 Manihot esculenta HOM05D007863 ORTHO05D009265 1.7e-07 59.7 109 39.4
CAN.G407.102 Capsicum annuum HOM05D007863 ORTHO05D009265 2.2e-07 59.3 88 44.3
Nitab4.5_0010254g0050 Nicotiana tabacum HOM05D007863 ORTHO05D009265 2.2e-07 59.3 109 39.4
Rhsim08G0215300 Rhododendron simsii HOM05D007863 ORTHO05D009265 2.2e-07 59.3 51 58.8
ClCG09G002780 Citrullus lanatus HOM05D007863 ORTHO05D009265 2.8e-07 58.9 46 71.7
CsaV3_7G032550 Cucumis sativus L. HOM05D007863 ORTHO05D009265 3.7e-07 58.5 44 72.7
Manes.04G115800 Manihot esculenta HOM05D007863 ORTHO05D009265 3.7e-07 58.5 82 45.1
Phvul.010G154300 Phaseolus vulgaris HOM05D007863 ORTHO05D009265 6.3e-07 57.8 57 52.6
AUR62011544 Chenopodium quinoa HOM05D007863 ORTHO05D009265 8.2e-07 57.4 77 48.1
THA.LOC104808229 Tarenaya hassleriana HOM05D007863 ORTHO05D009265 8.2e-07 57.4 73 46.6
Atru.chr1.3052 Acer truncatum HOM05D007863 ORTHO05D009265 1.4e-06 56.6 34 79.4
Potri.003G062300 Populus trichocarpa HOM05D007863 ORTHO05D009265 1.4e-06 56.6 91 46.2
TWI12G0528 Tripterygium wilfordii HOM05D007863 ORTHO05D009265 1.4e-06 56.6 82 45.1
BraA06t24319Z Brassica rapa HOM05D010306 ORTHO05D009265 1.8e-06 56.2 50 62.0
MELO3C023407.2 Cucumis melo HOM05D007863 ORTHO05D009265 1.8e-06 56.2 46 67.4
MBI01_g37813_MAGBIO Magnolia biondii HOM05D007863 ORTHO05D009265 3.1e-06 55.5 46 63.0
Sp1g13730 Schrenkiella parvula HOM05D010306 ORTHO05D009265 3.1e-06 55.5 50 62.0
Sed0015441 Sechium edule HOM05D007863 ORTHO05D009265 3.1e-06 55.5 48 64.6
Cpa.g.sc10.233 Carica papaya HOM05D007863 ORTHO05D009265 4.1e-06 55.1 77 42.9
BcaB03g14543 Brassica carinata HOM05D010306 ORTHO05D009265 5.3e-06 54.7 52 63.5
BcaC07g41504 Brassica carinata HOM05D010306 ORTHO05D009265 5.3e-06 54.7 48 62.5
A09p61440 Brassica napus HOM05D010306 ORTHO05D009265 5.3e-06 54.7 48 62.5
C08p45000 Brassica napus HOM05D010306 ORTHO05D009265 5.3e-06 54.7 48 62.5
BolC8t52046H Brassica oleracea HOM05D010306 ORTHO05D009265 5.3e-06 54.7 48 62.5
BraA09t41515Z Brassica rapa HOM05D010306 ORTHO05D009265 5.3e-06 54.7 48 62.5
Migut.I00793 Erythranthe guttata HOM05D007863 ORTHO05D009265 9.1e-06 53.9 60 53.3


User provided reference genes

Program Settings