Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 2.4e-127 459.1 235 100.0
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 2.7e-94 349.4 231 74.5
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 7.8e-94 347.8 233 74.7
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 1.3e-93 347.1 251 72.5
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 6.7e-69 265.0 249 61.0
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 1.1e-66 257.7 254 57.9
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 2.9e-64 249.6 237 58.2
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 1.2e-62 244.2 244 54.9
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 1.3e-56 224.2 220 54.1
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 1.9e-52 210.3 255 44.3
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 3.3e-52 209.5 249 48.6
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 3.7e-51 206.1 256 43.4
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 4.8e-51 205.7 244 47.5
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 4.1e-50 202.6 252 44.4
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 1.2e-49 201.1 242 43.4
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 1.5e-49 200.7 255 41.6
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 2.0e-49 200.3 256 42.2
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 2.6e-49 199.9 249 44.6
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 2.6e-49 199.9 249 44.6
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 2.6e-49 199.9 264 40.9
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 3.4e-49 199.5 255 42.7
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.0e-48 198.0 240 47.9
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 3.8e-48 196.1 254 43.3
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 6.5e-48 195.3 237 44.3
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 8.5e-48 194.9 252 42.5
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 1.4e-47 194.1 259 51.4
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 1.4e-47 194.1 262 43.5
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 1.9e-47 193.7 266 39.8
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 1.9e-47 193.7 259 51.4
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 2.5e-47 193.4 271 41.0
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 5.5e-47 192.2 259 45.2
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 9.4e-47 191.4 243 44.4
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 1.2e-46 191.0 240 47.1
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 1.6e-46 190.7 249 47.8
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 2.7e-46 189.9 260 45.0
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 6.1e-46 188.7 268 43.7
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 6.7e-45 185.3 259 45.6
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 6.7e-45 185.3 260 41.5
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 1.1e-44 184.5 240 39.6
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 1.5e-44 184.1 260 41.9
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 2.0e-44 183.7 234 46.2
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 2.6e-44 183.3 263 44.1
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 7.4e-44 181.8 238 44.1
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 7.4e-44 181.8 267 41.2
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 9.7e-44 181.4 224 42.0
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 1.7e-43 180.6 260 41.9
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 2.8e-43 179.9 277 39.4
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 4.8e-43 179.1 248 43.1
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 6.3e-43 178.7 237 43.9
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 6.3e-43 178.7 237 43.9
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 8.2e-43 178.3 220 45.5
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 4.1e-42 176.0 246 38.6
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 1.2e-41 174.5 266 38.0
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 2.0e-41 173.7 235 45.5
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 2.0e-41 173.7 235 45.5
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 2.6e-41 173.3 247 42.5
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 4.5e-41 172.6 245 43.3
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 5.9e-41 172.2 263 40.3
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 1.0e-40 171.4 182 46.7
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 1.3e-40 171.0 223 44.8
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 1.3e-40 171.0 243 42.0
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 2.2e-40 170.2 223 44.8
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 2.9e-40 169.9 269 39.0
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 3.8e-40 169.5 233 44.2
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 5.0e-40 169.1 233 44.2
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 1.4e-39 167.5 171 45.0
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 2.5e-39 166.8 271 39.9
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 4.2e-39 166.0 237 45.6
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 5.5e-39 165.6 257 42.8
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 7.2e-39 165.2 262 42.0
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 9.4e-39 164.9 167 47.9
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 2.3e-37 160.2 191 40.8
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 3.9e-37 159.5 230 43.5
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 2.6e-36 156.8 258 39.1
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 2.6e-36 156.8 214 42.1
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 1.3e-35 154.5 249 36.9
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.7e-35 154.1 186 44.1
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 2.8e-35 153.3 191 43.5
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 6.3e-35 152.1 265 38.1
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 2.4e-34 150.2 265 35.5
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 2.0e-33 147.1 263 36.9
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 3.5e-33 146.4 295 34.2
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 1.3e-32 144.4 248 39.1
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 2.2e-32 143.7 261 38.7
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 1.6e-30 137.5 247 37.7
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 1.2e-28 131.3 279 33.3
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 2.9e-24 116.7 162 40.1
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 5.0e-24 115.9 151 40.4
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 1.2e-22 111.3 167 39.5
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 1.8e-21 107.5 109 46.8
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 2.4e-18 97.1 270 28.5
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 1.2e-17 94.7 259 30.5
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 5.5e-15 85.9 116 37.9
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 9.5e-15 85.1 108 38.9
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 2.1e-14 84.0 157 37.6
Pp3c14_13390 Physcomitrium patens HOM05D007444 ORTHO05D009359 2.4e-10 70.5 114 36.8
Os06g0565300 Oryza sativa ssp. japonica HOM05D007444 ORTHO05D009359 2.5e-07 60.5 79 44.3


User provided reference genes

Program Settings