Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 1.3e-88 329.7 168 100.0
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 9.3e-71 270.4 170 83.5
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 1.0e-69 266.9 167 81.4
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 5.7e-68 261.2 168 79.8
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 1.8e-61 239.6 168 74.4
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 1.0e-53 213.8 167 68.9
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 3.9e-53 211.8 170 67.6
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 1.4e-50 203.4 168 63.7
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 1.4e-45 186.8 171 60.2
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 1.2e-41 173.7 172 55.2
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 4.5e-41 171.8 171 57.3
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 7.7e-41 171.0 170 55.3
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 2.9e-40 169.1 171 55.6
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 3.8e-40 168.7 169 56.2
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 2.5e-39 166.0 171 55.0
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 3.2e-39 165.6 172 53.5
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 2.1e-38 162.9 183 53.6
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 2.1e-38 162.9 171 53.8
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 4.7e-38 161.8 169 53.8
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 1.4e-37 160.2 166 53.6
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 1.8e-37 159.8 175 50.3
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 2.3e-37 159.5 174 52.9
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 3.0e-37 159.1 170 53.5
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 3.0e-37 159.1 169 49.7
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 3.0e-37 159.1 173 52.0
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 4.0e-37 158.7 176 50.0
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 5.2e-37 158.3 172 54.7
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 5.2e-37 158.3 163 54.0
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 5.2e-37 158.3 173 52.0
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 5.2e-37 158.3 171 50.9
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 6.7e-37 157.9 176 49.4
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 8.8e-37 157.5 169 47.3
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 1.1e-36 157.1 166 53.0
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 1.1e-36 157.1 166 53.0
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 1.5e-36 156.8 170 50.0
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 1.5e-36 156.8 169 52.1
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 1.5e-36 156.8 169 50.3
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 2.0e-36 156.4 170 52.4
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 2.0e-36 156.4 171 47.4
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 3.3e-36 155.6 166 52.4
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 3.3e-36 155.6 166 52.4
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 3.3e-36 155.6 166 52.4
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 4.4e-36 155.2 171 52.6
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 9.7e-36 154.1 166 51.8
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 9.7e-36 154.1 166 51.8
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 1.7e-35 153.3 170 49.4
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 1.7e-35 153.3 174 50.6
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 1.7e-35 153.3 169 50.9
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 2.2e-35 152.9 177 48.0
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 2.8e-35 152.5 168 52.4
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 2.8e-35 152.5 169 52.1
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 3.7e-35 152.1 169 51.5
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 4.8e-35 151.8 172 47.1
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 4.8e-35 151.8 159 51.6
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 6.3e-35 151.4 171 49.7
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 8.2e-35 151.0 168 51.2
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 1.1e-34 150.6 170 48.2
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 1.4e-34 150.2 166 49.4
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 1.4e-34 150.2 172 51.2
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 1.4e-34 150.2 169 51.5
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 1.8e-34 149.8 166 50.6
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 1.8e-34 149.8 166 52.4
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 3.1e-34 149.1 170 51.8
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 3.1e-34 149.1 171 50.3
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 5.3e-34 148.3 171 51.5
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 1.6e-33 146.7 171 50.9
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 2.7e-33 146.0 171 49.7
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 1.0e-32 144.1 168 46.4
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 3.8e-32 142.1 169 46.7
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 1.9e-31 139.8 168 45.2
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 2.5e-31 139.4 155 49.0
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 3.2e-31 139.0 170 46.5
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 4.2e-31 138.7 155 49.7
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 6.1e-30 134.8 177 44.1
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 1.4e-29 133.7 175 45.1
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 2.0e-28 129.8 164 47.0
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 5.7e-28 128.3 168 43.5
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 8.3e-27 124.4 165 42.4
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 5.4e-26 121.7 168 46.4
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 7.0e-26 121.3 140 48.6
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 9.1e-26 120.9 165 41.8
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 1.2e-25 120.6 167 41.9
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 1.6e-25 120.2 169 42.0
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 2.0e-25 119.8 158 44.3
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 7.7e-25 117.9 169 42.0
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 1.5e-23 113.6 137 43.8
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 1.6e-22 110.2 170 40.6
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 3.6e-22 109.0 165 42.4
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 6.1e-22 108.2 169 42.0
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 1.8e-21 106.7 122 46.7
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 1.2e-20 104.0 141 44.0
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 3.7e-19 99.0 128 42.2
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 1.1e-18 97.4 170 38.8
EL10Ac9g22812 Beta vulgaris HOM05D007459 ORTHO05D009234 4.3e-15 85.5 149 38.9
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 5.6e-15 85.1 160 36.2
EL10Ac4g10228 Beta vulgaris HOM05D007459 ORTHO05D009234 1.5e-12 77.0 134 38.1
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 5.7e-12 75.1 111 36.9
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 6.4e-11 71.6 131 35.9
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 1.3e-08 63.9 178 29.8
Pp3c3_12780 Physcomitrium patens HOM05D007459 ORTHO05D009234 2.5e-07 59.7 181 29.8
Mapoly0038s0008 Marchantia polymorpha HOM05D007459 ORTHO05D009234 3.3e-07 59.3 181 28.2


User provided reference genes

Program Settings