Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g282040 Pisum sativum HOM05D005647 ORTHO05D006968 0.0e+00 1467.2 751 100.0
TPR.G17867 Trifolium pratense HOM05D005647 ORTHO05D006968 1.0e-310 1069.7 794 72.8
TPR.G11621 Trifolium pratense HOM05D005647 ORTHO05D006968 1.9e-309 1065.4 798 72.6
Medtr2g096090 Medicago truncatula HOM05D005647 ORTHO05D006968 3.1e-307 1058.1 793 71.9
Ca_01361_v3 Cicer arietinum L. HOM05D005647 ORTHO05D006968 6.4e-305 1050.4 792 71.6
Lj3g0017565 Lotus japonicus HOM05D005647 ORTHO05D006968 9.8e-221 770.8 808 57.3
VMungo1080G1709 Vigna mungo HOM05D005647 ORTHO05D006968 3.4e-189 666.0 770 52.1
Phvul.L002619 Phaseolus vulgaris HOM05D005647 ORTHO05D006968 2.4e-182 643.3 775 50.8
Glyma.13G196800 Glycine max HOM05D005647 ORTHO05D006968 1.0e-172 611.3 757 49.9
Lalb_Chr24g0394311 Lupinus albus HOM05D005647 ORTHO05D006968 1.9e-171 607.1 738 48.9
Cfa011418 Carpinus fangiana HOM05D005647 ORTHO05D006968 6.1e-130 469.2 763 40.4
QL03p069904 Quercus lobata HOM05D005647 ORTHO05D006968 7.0e-126 455.7 755 42.5
Gohir.A05G099200 Gossypium hirsutum HOM05D005647 ORTHO05D006968 6.5e-124 449.1 714 40.6
MD11G1117900 Malus domestica HOM05D005647 ORTHO05D006968 1.9e-123 447.6 767 39.9
COL.COLO4_18417 Corchorus olitorius HOM05D005647 ORTHO05D006968 8.0e-122 442.2 702 41.0
Thecc.09G331200 Theobroma cacao HOM05D005647 ORTHO05D006968 1.8e-121 441.0 806 39.3
arahy.Tifrunner.gnm1.ann1.W04KXW Arachis hypogaea HOM05D005647 ORTHO05D006968 8.8e-121 438.7 754 40.3
CiPaw.13G102300 Carya illinoinensis HOM05D005647 ORTHO05D006968 3.4e-120 436.8 728 40.2
Manes.04G028600 Manihot esculenta HOM05D005647 ORTHO05D006968 1.3e-119 434.9 766 38.3
Gohir.D05G099100 Gossypium hirsutum HOM05D005647 ORTHO05D006968 1.7e-119 434.5 753 39.3
TWI75G1819 Tripterygium wilfordii HOM05D005647 ORTHO05D006968 3.7e-119 433.3 367 59.1
Gorai.009G103000 Gossypium raimondii HOM05D005647 ORTHO05D006968 3.1e-118 430.3 787 38.4
Duzib150G0770 Durio zibethinus HOM05D005647 ORTHO05D006968 4.1e-118 429.9 815 37.4
arahy.Tifrunner.gnm1.ann1.S4SLQI Arachis hypogaea HOM05D005647 ORTHO05D006968 9.2e-118 428.7 757 39.4
arahy.Tifrunner.gnm1.ann1.7X2355 Arachis hypogaea HOM05D005647 ORTHO05D006968 2.0e-117 427.6 372 59.4
Rhsim01G0223800 Rhododendron simsii HOM05D005647 ORTHO05D006968 1.5e-115 421.4 770 38.1
Actinidia00810 Actinidia chinensis HOM05D005647 ORTHO05D006968 2.5e-115 420.6 767 38.7
Haze_23998 Corylus avellana HOM05D005647 ORTHO05D006968 3.3e-115 420.2 434 53.9
Potri.009G025800 Populus trichocarpa HOM05D005647 ORTHO05D006968 1.6e-114 417.9 788 39.2
FAN11G0841 Fragaria x ananassa HOM05D005647 ORTHO05D006968 4.7e-114 416.4 373 59.0
Lj1A178T39 Lonicera japonica HOM05D005647 ORTHO05D006968 4.7e-114 416.4 470 48.7
GSVIVG01025064001 Vitis vinifera HOM05D005647 ORTHO05D006968 2.3e-113 414.1 545 47.7
CANSAT54G2414 Cannabis sativa HOM05D005647 ORTHO05D006968 1.2e-112 411.8 362 58.6
FAN25G1201 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.2e-112 411.8 373 58.2
Lsat_1_v5_gn_5_167021 Lactuca sativa HOM05D005647 ORTHO05D006968 2.0e-112 411.0 341 61.6
RcHm_v2.0_Chr4g0385531 Rosa chinensis HOM05D005647 ORTHO05D006968 5.7e-112 409.5 762 38.7
FAN16G2614 Fragaria x ananassa HOM05D005647 ORTHO05D006968 9.8e-112 408.7 373 57.4
Atru.chr3.3782 Acer truncatum HOM05D005647 ORTHO05D006968 1.3e-111 408.3 853 35.4
RcHm_v2.0_Chr5g0062191 Rosa chinensis HOM05D005647 ORTHO05D006968 2.2e-111 407.5 772 37.8
Ciclev10027867m.g Citrus clementina HOM05D005647 ORTHO05D006968 4.9e-111 406.4 779 37.2
FvH4_3g34550 Fragaria vesca HOM05D005647 ORTHO05D006968 6.4e-111 406.0 767 38.2
arahy.Tifrunner.gnm1.ann1.ZDAZ4C Arachis hypogaea HOM05D005647 ORTHO05D006968 3.2e-110 403.7 756 38.1
PGSC0003DMG400033668 Solanum tuberosum HOM05D005647 ORTHO05D006968 1.6e-109 401.4 344 59.0
Nitab4.5_0008854g0020 Nicotiana tabacum HOM05D005647 ORTHO05D006968 2.0e-109 401.0 346 58.4
Cc01_g12040 Coffea canephora HOM05D005647 ORTHO05D006968 2.7e-109 400.6 762 36.7
FAN21G3075 Fragaria x ananassa HOM05D005647 ORTHO05D006968 1.3e-108 398.3 757 37.8
TAR623G0344 Trochodendron aralioides HOM05D005647 ORTHO05D006968 1.3e-108 398.3 368 57.1
Sed0021109 Sechium edule HOM05D005647 ORTHO05D006968 8.6e-108 395.6 576 42.2
PSO541G4932 Papaver somniferum HOM05D005647 ORTHO05D006968 7.3e-107 392.5 395 52.7
DCAR_005295 Daucus carota HOM05D005647 ORTHO05D006968 1.6e-106 391.3 391 54.0
PSO447G0260 Papaver somniferum HOM05D005647 ORTHO05D006968 1.6e-106 391.3 448 49.3
EL10Ac7g15937 Beta vulgaris HOM05D005647 ORTHO05D006968 2.1e-106 391.0 387 54.0
Nitab4.5_0000022g0330 Nicotiana tabacum HOM05D005647 ORTHO05D006968 2.8e-106 390.6 773 36.7
Hund18946 Selenicereus undatus HOM05D005647 ORTHO05D006968 8.0e-106 389.0 372 55.9
ClCG02G020580 Citrullus lanatus HOM05D005647 ORTHO05D006968 1.0e-105 388.7 354 54.8
AL8G36550 Arabidopsis lyrata HOM05D005647 ORTHO05D006968 2.3e-105 387.5 376 53.5
MSTRG.21166 Avicennia marina HOM05D005647 ORTHO05D006968 8.9e-105 385.6 525 44.4
PSO675G6613 Papaver somniferum HOM05D005647 ORTHO05D006968 8.9e-105 385.6 424 50.0
Prupe.6G088000 Prunus persica HOM05D005647 ORTHO05D006968 2.6e-104 384.0 721 38.6
Aa31LG1G12110 Aethionema arabicum HOM05D005647 ORTHO05D006968 3.4e-104 383.6 344 56.7
Actinidia03769 Actinidia chinensis HOM05D005647 ORTHO05D006968 4.4e-104 383.3 735 38.2
Sabra09G0017200 Salix brachista HOM05D005647 ORTHO05D000187 7.5e-104 382.5 766 38.4
Ah.15g096320 Amaranthus hybridus HOM05D005647 ORTHO05D006968 9.8e-104 382.1 452 47.6
Sopen06g001190 Solanum pennellii HOM05D005647 ORTHO05D006968 9.8e-104 382.1 760 37.6
MELO3C025708.2 Cucumis melo HOM05D005647 ORTHO05D006968 1.7e-103 381.3 369 53.7
Cpa.g.sc139.4 Carica papaya HOM05D005647 ORTHO05D006968 2.9e-103 380.6 297 64.3
Solyc06g005200.3 Solanum lycopersicum HOM05D005647 ORTHO05D006968 8.3e-103 379.0 768 37.2
SGA_v2.0_scaffold61G21232 Striga asiatica HOM05D005647 ORTHO05D006968 1.4e-102 378.3 342 55.6
HanXRQChr14g0429211 Helianthus annuus HOM05D005647 ORTHO05D006968 1.9e-102 377.9 350 54.9
AT5G59980 Arabidopsis thaliana HOM05D005647 ORTHO05D006968 2.4e-102 377.5 528 42.4
Sc14g0000850 Simmondsia chinensis HOM05D005647 ORTHO05D006968 2.4e-102 377.5 340 56.5
AUR62001855 Chenopodium quinoa HOM05D005647 ORTHO05D006968 5.4e-102 376.3 450 47.3
THA.LOC104809599 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 1.2e-101 375.2 386 50.8
Eucgr.A02758 Eucalyptus grandis HOM05D005647 ORTHO05D006968 2.0e-101 374.4 754 36.9
Carub.0004s0912 Capsella rubella HOM05D005647 ORTHO05D006968 2.7e-101 374.0 344 54.7
Migut.D02155 Erythranthe guttata HOM05D005647 ORTHO05D006968 6.0e-101 372.9 460 47.2
ECA248G2619 Erigeron canadensis HOM05D005647 ORTHO05D006968 3.0e-100 370.5 364 53.8
MBI14_g34527_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 1.9e-99 367.9 390 50.0
Aqoxy4G03106 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 2.5e-99 367.5 346 53.5
PGR119G0370 Punica granatum HOM05D005647 ORTHO05D006968 2.5e-99 367.5 337 55.8
CAN.G200.2 Capsicum annuum HOM05D005647 ORTHO05D006968 9.5e-99 365.5 308 59.7
Peaxi162Scf00006g01310 Petunia axillaris HOM05D005647 ORTHO05D006968 1.1e-97 362.1 341 56.3
Thhalv10012856m.g Eutrema salsugineum HOM05D005647 ORTHO05D006968 5.2e-97 359.8 344 54.4
VMungo1127G0608 Vigna mungo HOM05D005647 ORTHO05D006968 4.9e-95 353.2 527 43.1
unitig_736.g22430 Utricularia gibba HOM05D005647 ORTHO05D006968 1.4e-94 351.7 342 53.2
BcaB05g22600 Brassica carinata HOM05D005647 ORTHO05D006968 5.4e-94 349.7 390 49.0
vmacro14498 Vaccinium macrocarpon HOM05D005647 ORTHO05D006968 1.6e-93 348.2 385 51.4
ATR0787G117 Amborella trichopoda HOM05D005647 ORTHO05D006968 3.5e-93 347.1 376 49.2
A02p06680 Brassica napus HOM05D005647 ORTHO05D006968 1.3e-92 345.1 400 46.5
C02p11970 Brassica napus HOM05D005647 ORTHO05D006968 2.3e-92 344.4 400 46.5
BraA02t05750Z Brassica rapa HOM05D005647 ORTHO05D006968 2.3e-92 344.4 400 46.5
Aa31LG5G21920 Aethionema arabicum HOM05D005647 ORTHO05D006968 8.6e-92 342.4 310 56.8
Oeu058515.3 Olea europaea HOM05D005647 ORTHO05D006968 1.5e-91 341.7 449 44.3
SalBow3G2669 Salvia bowleyana HOM05D005647 ORTHO05D006968 1.2e-90 338.6 374 48.7
BraA10t43800Z Brassica rapa HOM05D005647 ORTHO05D006968 1.6e-90 338.2 346 50.9
SalBow3G1239 Salvia bowleyana HOM05D005647 ORTHO05D006968 1.6e-90 338.2 374 48.7
BcaC04g19653 Brassica carinata HOM05D005647 ORTHO05D006968 3.6e-90 337.0 346 50.9
BolC2t07297H Brassica oleracea HOM05D005647 ORTHO05D006968 3.6e-90 337.0 623 36.4
BolC9t58115H Brassica oleracea HOM05D005647 ORTHO05D006968 3.6e-90 337.0 346 50.9
C09p52480 Brassica napus HOM05D005647 ORTHO05D006968 6.2e-90 336.3 346 50.9
Sp6g21650 Schrenkiella parvula HOM05D005647 ORTHO05D006968 8.1e-90 335.9 359 50.1
BcaB08g36205 Brassica carinata HOM05D005647 ORTHO05D006968 1.1e-89 335.5 542 39.5
A10p17190 Brassica napus HOM05D005647 ORTHO05D006968 5.2e-89 333.2 346 50.6
THA.LOC104813123 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 3.4e-88 330.5 310 54.5
Aqoxy4G03104_Aqoxy4G03103 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 2.2e-87 327.8 347 49.6
CDE08G0081 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 1.1e-86 325.5 486 40.1
CDE02G4018 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 6.0e-85 319.7 334 48.8
VMungo1127G1784 Vigna mungo HOM05D005647 ORTHO05D006968 7.1e-78 296.2 205 72.7
Gorai.013G129300 Gossypium raimondii HOM05D005647 ORTHO05D006968 8.1e-74 282.7 251 60.2
AUR62009649 Chenopodium quinoa HOM05D005647 ORTHO05D006968 7.6e-64 249.6 313 44.7
Nn2g13828 Nelumbo nucifera HOM05D005647 ORTHO05D006968 2.4e-62 244.6 205 58.5
Mapoly0041s0094 Marchantia polymorpha HOM05D005647 ORTHO05D006968 1.0e-60 239.2 372 37.9
SEGI_32841 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 2.4e-57 228.0 253 47.4
Pp3c23_18130 Physcomitrium patens HOM05D005647 ORTHO05D006968 1.7e-55 221.9 272 43.4
Os12g0175900 Oryza sativa ssp. japonica HOM05D005647 ORTHO05D006968 2.4e-49 201.4 296 41.6
CsaV3_6G022020 Cucumis sativus L. HOM05D005647 ORTHO05D006968 3.6e-45 187.6 164 56.7
Zm00001eb163100 Zea mays HOM05D005647 ORTHO05D006968 4.6e-45 187.2 325 37.2
VMungo1127G1495 Vigna mungo HOM05D005647 ORTHO05D006968 1.7e-34 152.1 125 64.8
Dinv32824 Davidia involucrata HOM05D005647 ORTHO05D006968 1.1e-33 149.4 533 30.0
Aqoxy4G01384 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 2.6e-32 144.8 113 62.8
MBI03_g45445_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 1.1e-27 129.4 122 53.3
Lsat_1_v5_gn_5_100621 Lactuca sativa HOM05D005647 ORTHO05D006968 9.7e-27 126.3 145 46.2
CARHR273620 Cardamine hirsuta HOM05D005647 ORTHO05D006968 2.8e-26 124.8 158 43.7
Cre02.g088050 Chlamydomonas reinhardtii HOM05D005647 ORTHO05D006968 1.1e-22 112.8 285 27.4
SEGI_06158 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 9.4e-22 109.8 134 45.5
SMO348G0064 Selaginella moellendorffii HOM05D005647 ORTHO05D006968 1.0e-20 106.3 128 42.2
EL10Ac9g22529 Beta vulgaris HOM05D005647 ORTHO05D006968 2.8e-18 98.2 84 56.0
MCO02G042 Micromonas commoda HOM05D005647 ORTHO05D006968 1.3e-15 89.4 183 29.5
QL03p025644 Quercus lobata HOM05D005647 ORTHO05D006968 2.5e-14 85.1 59 66.1
Gohir.D11G155700 Gossypium hirsutum HOM05D001229 ORTHO05D011852 3.4e-11 74.7 67 61.2
Gorai.007G165900 Gossypium raimondii HOM05D001229 ORTHO05D011852 3.4e-11 74.7 67 61.2
MBI10_g46876_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 1.8e-09 68.9 81 44.4
MBI14_g07932_MAGBIO Magnolia biondii HOM05D002922 ORTHO05D006968 1.8e-09 68.9 75 48.0
Psat0s6012g0040 Pisum sativum HOM05D005647 ORTHO05D327504 8.6e-07 60.1 41 73.2


User provided reference genes

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