Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g269360 Pisum sativum HOM05D000736 ORTHO05D326421 4.0e-56 221.1 104 100.0
Atru.chr6.3280 Acer truncatum HOM05D000736 ORTHO05D007707 1.4e-08 63.2 45 71.1
Psat5g051680 Pisum sativum HOM05D000736 ORTHO05D320000 1.4e-08 63.2 46 76.1
ATR1101G028 Amborella trichopoda HOM05D000736 ORTHO05D007707 1.8e-08 62.8 47 66.0
Cfa014296 Carpinus fangiana HOM05D000736 ORTHO05D007707 1.8e-08 62.8 45 71.1
CiPaw.04G192900 Carya illinoinensis HOM05D000736 ORTHO05D007707 1.8e-08 62.8 45 71.1
Haze_12744 Corylus avellana HOM05D000736 ORTHO05D007707 1.8e-08 62.8 45 71.1
Ciclev10015116m.g Citrus clementina HOM05D000736 ORTHO05D007707 2.4e-08 62.4 45 71.1
Eucgr.K00728 Eucalyptus grandis HOM05D000736 ORTHO05D007707 2.4e-08 62.4 68 52.9
Medtr1g069385 Medicago truncatula HOM05D000736 ORTHO05D007707 3.1e-08 62.0 44 72.7
TPR.G17941 Trifolium pratense HOM05D000736 ORTHO05D007707 3.1e-08 62.0 44 72.7
PGR004G0976 Punica granatum HOM05D000736 ORTHO05D007707 4.1e-08 61.6 68 54.4
Migut.F02001 Erythranthe guttata HOM05D000736 ORTHO05D007707 5.3e-08 61.2 45 66.7
Glyma.10G041100 Glycine max HOM05D000736 ORTHO05D007707 6.9e-08 60.8 44 70.5
Lalb_Chr06g0170771 Lupinus albus HOM05D000736 ORTHO05D007707 6.9e-08 60.8 44 68.2
Nitab4.5_0000130g0180 Nicotiana tabacum HOM05D000736 ORTHO05D007707 6.9e-08 60.8 44 68.2
QL08p029882 Quercus lobata HOM05D000736 ORTHO05D007707 6.9e-08 60.8 44 70.5
BcaB08g34480 Brassica carinata HOM05D000736 ORTHO05D007707 9.1e-08 60.5 45 66.7
BcaC01g03196 Brassica carinata HOM05D000736 ORTHO05D007707 9.1e-08 60.5 45 66.7
A03p44380 Brassica napus HOM05D000736 ORTHO05D007707 9.1e-08 60.5 45 66.7
C03p54990 Brassica napus HOM05D000736 ORTHO05D007707 9.1e-08 60.5 45 66.7
BolC3t17774H Brassica oleracea HOM05D000736 ORTHO05D007707 9.1e-08 60.5 45 66.7
BraA03t13568Z Brassica rapa HOM05D000736 ORTHO05D007707 9.1e-08 60.5 45 66.7
SalBow4G1832 Salvia bowleyana HOM05D000736 ORTHO05D007707 9.1e-08 60.5 45 66.7
Hma1.2p1_0133F.1_g060840 Hydrangea macrophylla HOM05D000736 ORTHO05D007707 1.2e-07 60.1 45 64.4
Oeu043936.2 Olea europaea HOM05D000736 ORTHO05D007707 1.2e-07 60.1 45 68.9
RcHm_v2.0_Chr2g0157571 Rosa chinensis HOM05D000736 ORTHO05D007707 1.2e-07 60.1 44 70.5
GSVIVG01030537001 Vitis vinifera HOM05D000736 ORTHO05D007707 1.2e-07 60.1 45 68.9
MSTRG.27459 Avicennia marina HOM05D000736 ORTHO05D007707 1.5e-07 59.7 45 66.7
Lj1A785G51 Lonicera japonica HOM05D000736 ORTHO05D007707 1.5e-07 59.7 45 68.9
CANSAT64G0309 Cannabis sativa HOM05D000736 ORTHO05D007707 2.0e-07 59.3 45 66.7
Ca_09638_v3 Cicer arietinum L. HOM05D000736 ORTHO05D007707 2.0e-07 59.3 44 70.5
Dinv08704 Davidia involucrata HOM05D000736 ORTHO05D007707 2.0e-07 59.3 45 68.9
Glyma.13G128000 Glycine max HOM05D000736 ORTHO05D007707 2.0e-07 59.3 44 68.2
MD09G1117200 Malus domestica HOM05D000736 ORTHO05D007707 2.0e-07 59.3 44 68.2
Nitab4.5_0008746g0030 Nicotiana tabacum HOM05D000736 ORTHO05D007707 2.0e-07 59.3 44 65.9
Prupe.3G206600 Prunus persica HOM05D000736 ORTHO05D007707 2.0e-07 59.3 44 68.2
arahy.Tifrunner.gnm1.ann1.L1XSI7 Arachis hypogaea HOM05D000736 ORTHO05D007707 2.6e-07 58.9 44 68.2
arahy.Tifrunner.gnm1.ann1.T4YVHB Arachis hypogaea HOM05D000736 ORTHO05D007707 2.6e-07 58.9 44 68.2
CDE07G0785 Ceratophyllum demersum HOM05D000736 ORTHO05D007707 2.6e-07 58.9 44 63.6
FvH4_6g41780 Fragaria vesca HOM05D000736 ORTHO05D007707 2.6e-07 58.9 44 68.2
FAN02G0028 Fragaria x ananassa HOM05D000736 ORTHO05D007707 2.6e-07 58.9 44 68.2
FAN05G5831 Fragaria x ananassa HOM05D000736 ORTHO05D007707 2.6e-07 58.9 44 68.2
FAN09G3712 Fragaria x ananassa HOM05D000736 ORTHO05D007707 2.6e-07 58.9 44 68.2
HanXRQChr16g0508321 Helianthus annuus HOM05D000736 ORTHO05D007707 2.6e-07 58.9 45 68.9
Sed0016142 Sechium edule HOM05D000736 ORTHO05D007707 2.6e-07 58.9 45 64.4
unitig_85.g27432 Utricularia gibba HOM05D000736 ORTHO05D007707 2.6e-07 58.9 45 64.4
Lsat_1_v5_gn_7_94701 Lactuca sativa HOM05D000736 ORTHO05D007707 3.4e-07 58.5 44 68.2
Lj5g0007920 Lotus japonicus HOM05D000736 ORTHO05D007707 3.4e-07 58.5 44 65.9
PSO210G3553 Papaver somniferum HOM05D000736 ORTHO05D007707 3.4e-07 58.5 45 64.4
PSO302G0194 Papaver somniferum HOM05D000736 ORTHO05D007707 3.4e-07 58.5 45 64.4
CSS0040036 Camellia sinensis var. sinensis HOM05D000736 ORTHO05D007707 4.5e-07 58.2 44 65.9
CSS0049875 Camellia sinensis var. sinensis HOM05D000736 ORTHO05D007707 4.5e-07 58.2 44 65.9
ECA236G4050 Erigeron canadensis HOM05D000736 ORTHO05D007707 4.5e-07 58.2 45 66.7
COL.COLO4_05386 Corchorus olitorius HOM05D000736 ORTHO05D007707 5.9e-07 57.8 45 62.2
MELO3C019716.2 Cucumis melo HOM05D000736 ORTHO05D007707 5.9e-07 57.8 45 64.4
Thhalv10002523m.g Eutrema salsugineum HOM05D000736 ORTHO05D007707 5.9e-07 57.8 45 64.4
SalBow8G3370 Salvia bowleyana HOM05D000736 ORTHO05D007707 5.9e-07 57.8 45 64.4
Sp3g23320 Schrenkiella parvula HOM05D000736 ORTHO05D007707 5.9e-07 57.8 45 64.4
Thecc.01G187600 Theobroma cacao HOM05D000736 ORTHO05D007707 5.9e-07 57.8 45 64.4
Cpa.g.sc132.49 Carica papaya HOM05D000736 ORTHO05D007707 7.7e-07 57.4 45 64.4
Nn1g07966 Nelumbo nucifera HOM05D000736 ORTHO05D007707 7.7e-07 57.4 44 63.6
CAN.G741.31 Capsicum annuum HOM05D000736 ORTHO05D007707 1.0e-06 57.0 44 63.6
CsaV3_6G015580 Cucumis sativus L. HOM05D000736 ORTHO05D007707 1.0e-06 57.0 45 64.4
Gohir.A11G151800 Gossypium hirsutum HOM05D000736 ORTHO05D007707 1.0e-06 57.0 44 65.9
Gohir.D11G158800 Gossypium hirsutum HOM05D000736 ORTHO05D007707 1.0e-06 57.0 44 65.9
Gorai.007G169200 Gossypium raimondii HOM05D000736 ORTHO05D007707 1.0e-06 57.0 44 65.9
Solyc07g049570.3 Solanum lycopersicum HOM05D000736 ORTHO05D007707 1.0e-06 57.0 44 63.6
Sopen07g024970 Solanum pennellii HOM05D000736 ORTHO05D007707 1.0e-06 57.0 44 63.6
PGSC0003DMG400006426 Solanum tuberosum HOM05D000736 ORTHO05D007707 1.0e-06 57.0 44 63.6
TWI75G0266 Tripterygium wilfordii HOM05D000736 ORTHO05D007707 1.0e-06 57.0 45 64.4
Cc04_g10360 Coffea canephora HOM05D000736 ORTHO05D007707 1.3e-06 56.6 45 60.0
Duzib133G0031 Durio zibethinus HOM05D000736 ORTHO05D007707 1.7e-06 56.2 44 65.9
Phvul.007G154300 Phaseolus vulgaris HOM05D000736 ORTHO05D007707 1.7e-06 56.2 44 65.9
Potri.002G219500 Populus trichocarpa HOM05D000736 ORTHO05D007707 1.7e-06 56.2 45 64.4
Sabra02G0171100 Salix brachista HOM05D000736 ORTHO05D007707 1.7e-06 56.2 45 64.4
AL3G42180 Arabidopsis lyrata HOM05D000736 ORTHO05D007707 2.2e-06 55.8 45 62.2
AT2G04540 Arabidopsis thaliana HOM05D000736 ORTHO05D007707 2.2e-06 55.8 45 62.2
MSTRG.19436 Avicennia marina HOM05D000736 ORTHO05D002593 2.2e-06 55.8 44 68.2
Carub.0003s2617 Capsella rubella HOM05D000736 ORTHO05D007707 2.2e-06 55.8 45 62.2
CAN.G784.5 Capsicum annuum HOM05D000736 ORTHO05D007707 2.2e-06 55.8 44 61.4
DCAR_019736 Daucus carota HOM05D000736 ORTHO05D007707 2.2e-06 55.8 67 50.7
THA.LOC104808867 Tarenaya hassleriana HOM05D000736 ORTHO05D007707 2.2e-06 55.8 44 63.6
MBI13_g30073_MAGBIO Magnolia biondii HOM05D000736 ORTHO05D007707 2.9e-06 55.5 44 61.4
TAR624G0711 Trochodendron aralioides HOM05D000736 ORTHO05D007707 2.9e-06 55.5 45 60.0
Atru.chr6.3296 Acer truncatum HOM05D000736 ORTHO05D007707 3.8e-06 55.1 55 58.2
Os02g0196900 Oryza sativa ssp. japonica HOM05D000736 ORTHO05D007707 3.8e-06 55.1 44 61.4
Aa31sc76G30 Aethionema arabicum HOM05D000736 ORTHO05D007707 5.0e-06 54.7 45 60.0
Ah.01g001800 Amaranthus hybridus HOM05D003198 ORTHO05D007707 5.0e-06 54.7 44 61.4
Aqoxy1G04108 Aquilegia oxysepala HOM05D000736 ORTHO05D007707 5.0e-06 54.7 45 60.0
Manes.13G064800 Manihot esculenta HOM05D000736 ORTHO05D007707 5.0e-06 54.7 45 60.0
SEGI_02920 Sequoiadendron giganteum HOM05D000736 ORTHO05D007707 5.0e-06 54.7 45 60.0
EL10Ac9g22789 Beta vulgaris HOM05D000736 ORTHO05D007707 6.5e-06 54.3 44 61.4
HanXRQChr01g0020441 Helianthus annuus HOM05D000736 ORTHO05D002171 6.5e-06 54.3 56 50.0
HanXRQChr09g0237851 Helianthus annuus HOM05D000736 ORTHO05D002593 6.5e-06 54.3 67 50.7
CBR_g41120 Chara braunii HOM05D000736 ORTHO05D007707 8.5e-06 53.9 67 46.3
Rhsim06G0170000 Rhododendron simsii HOM05D000736 ORTHO05D007707 8.5e-06 53.9 45 57.8


User provided reference genes

Program Settings