Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g264240 Pisum sativum HOM05D006996 ORTHO05D008961 2.7e-34 147.9 64 100.0
TPR.G4182 Trifolium pratense HOM05D006996 ORTHO05D008961 2.7e-34 147.9 64 100.0
Lj3g0015321 Lotus japonicus HOM05D006996 ORTHO05D008961 7.7e-34 146.4 64 98.4
Medtr2g088460 Medicago truncatula HOM05D006996 ORTHO05D008961 1.3e-33 145.6 63 100.0
Phvul.005G114700 Phaseolus vulgaris HOM05D006996 ORTHO05D008961 8.5e-33 142.9 63 96.8
Glyma.12G194300 Glycine max HOM05D006996 ORTHO05D008961 1.9e-32 141.7 63 95.2
Glyma.13G308300 Glycine max HOM05D006996 ORTHO05D008961 1.9e-32 141.7 63 95.2
arahy.Tifrunner.gnm1.ann1.7T5QAW Arachis hypogaea HOM05D006996 ORTHO05D008961 2.7e-31 137.9 64 92.2
arahy.Tifrunner.gnm1.ann1.BHY6M8 Arachis hypogaea HOM05D006996 ORTHO05D008961 2.7e-31 137.9 64 92.2
arahy.Tifrunner.gnm1.ann1.MSE8LU Arachis hypogaea HOM05D006996 ORTHO05D008961 2.7e-31 137.9 64 92.2
arahy.Tifrunner.gnm1.ann1.QWF8TS Arachis hypogaea HOM05D006996 ORTHO05D008961 2.7e-31 137.9 64 92.2
Duzib128G0982 Durio zibethinus HOM05D006996 ORTHO05D008961 3.0e-30 134.4 64 90.6
Lalb_Chr14g0375741 Lupinus albus HOM05D006996 ORTHO05D008961 6.8e-30 133.3 63 90.5
Eucgr.A01713 Eucalyptus grandis HOM05D006996 ORTHO05D008961 1.2e-29 132.5 64 89.1
Cfa014416 Carpinus fangiana HOM05D006996 ORTHO05D008961 2.6e-29 131.3 64 89.1
CiPaw.03G161100 Carya illinoinensis HOM05D006996 ORTHO05D008961 4.4e-29 130.6 64 85.9
Thecc.05G208500 Theobroma cacao HOM05D006996 ORTHO05D008961 4.4e-29 130.6 64 87.5
MD09G1069700 Malus domestica HOM05D006996 ORTHO05D008961 5.7e-29 130.2 64 89.1
MD17G1095900 Malus domestica HOM05D006996 ORTHO05D008961 5.7e-29 130.2 64 89.1
Prupe.3G218000 Prunus persica HOM05D006996 ORTHO05D008961 5.7e-29 130.2 64 89.1
PGR042G2836 Punica granatum HOM05D006996 ORTHO05D008961 7.5e-29 129.8 64 87.5
Gohir.A02G139400 Gossypium hirsutum HOM05D006996 ORTHO05D008961 1.7e-28 128.6 64 85.9
Gohir.D03G050100 Gossypium hirsutum HOM05D006996 ORTHO05D008961 1.7e-28 128.6 64 85.9
Gorai.003G051600 Gossypium raimondii HOM05D006996 ORTHO05D008961 1.7e-28 128.6 64 85.9
TWI18G0629 Tripterygium wilfordii HOM05D006996 ORTHO05D008961 2.8e-28 127.9 64 84.4
Ciclev10017328m.g Citrus clementina HOM05D006996 ORTHO05D008961 3.7e-28 127.5 64 85.9
CANSAT64G1676 Cannabis sativa HOM05D006996 ORTHO05D008961 6.3e-28 126.7 64 84.4
Dinv05447 Davidia involucrata HOM05D006996 ORTHO05D008961 8.3e-28 126.3 61 88.5
FvH4_6g43320 Fragaria vesca HOM05D006996 ORTHO05D008961 8.3e-28 126.3 64 85.9
FAN05G4357 Fragaria x ananassa HOM05D006996 ORTHO05D008961 8.3e-28 126.3 64 85.9
FAN14G3455 Fragaria x ananassa HOM05D006996 ORTHO05D008961 8.3e-28 126.3 64 85.9
Aa31LG1G19540 Aethionema arabicum HOM05D006996 ORTHO05D008961 1.1e-27 125.9 64 87.5
MSTRG.6557 Avicennia marina HOM05D006996 ORTHO05D008961 1.1e-27 125.9 63 88.9
QL08p033312 Quercus lobata HOM05D006996 ORTHO05D008961 2.4e-27 124.8 64 82.8
RcHm_v2.0_Chr2g0159651 Rosa chinensis HOM05D006996 ORTHO05D008961 2.4e-27 124.8 64 84.4
Dinv39702 Davidia involucrata HOM05D006996 ORTHO05D008961 3.1e-27 124.4 61 86.9
Zm00001eb100890 Zea mays HOM05D006996 ORTHO05D008961 3.1e-27 124.4 64 82.8
Zm00001eb209620 Zea mays HOM05D006996 ORTHO05D008961 3.1e-27 124.4 64 82.8
CSS0029979 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 4.1e-27 124.0 63 82.5
AT1G05205 Arabidopsis thaliana HOM05D006996 ORTHO05D008961 7.0e-27 123.2 64 87.5
Carub.0001s0448 Capsella rubella HOM05D006996 ORTHO05D008961 9.2e-27 122.9 64 85.9
CARHR004680 Cardamine hirsuta HOM05D006996 ORTHO05D008961 9.2e-27 122.9 64 85.9
Lj1A759T40 Lonicera japonica HOM05D006996 ORTHO05D008961 9.2e-27 122.9 64 81.2
Lj1A760T24 Lonicera japonica HOM05D006996 ORTHO05D008961 9.2e-27 122.9 64 81.2
AL1G14970 Arabidopsis lyrata HOM05D006996 ORTHO05D008961 1.2e-26 122.5 64 85.9
BcaC07g42146 Brassica carinata HOM05D006996 ORTHO05D008961 1.2e-26 122.5 64 85.9
A10p03740 Brassica napus HOM05D006996 ORTHO05D008961 1.2e-26 122.5 64 85.9
C05p03440 Brassica napus HOM05D006996 ORTHO05D008961 1.2e-26 122.5 64 85.9
C08p51920 Brassica napus HOM05D006996 ORTHO05D008961 1.2e-26 122.5 64 85.9
BolC5t29123H Brassica oleracea HOM05D006996 ORTHO05D008961 1.2e-26 122.5 64 85.9
BolC8t52723H Brassica oleracea HOM05D006996 ORTHO05D008961 1.2e-26 122.5 64 85.9
BraA09t42088Z Brassica rapa HOM05D006996 ORTHO05D008961 1.2e-26 122.5 64 85.9
BraA10t42647Z Brassica rapa HOM05D006996 ORTHO05D008961 1.2e-26 122.5 64 85.9
Thhalv10009219m.g Eutrema salsugineum HOM05D006996 ORTHO05D008961 1.2e-26 122.5 64 85.9
FAN02G2509 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.2e-26 122.5 64 84.4
Hma1.2p1_0957F.1_g241430 Hydrangea macrophylla HOM05D006996 ORTHO05D008961 1.2e-26 122.5 61 85.2
Manes.13G070800 Manihot esculenta HOM05D006996 ORTHO05D008961 1.2e-26 122.5 64 81.2
Sp1g04060 Schrenkiella parvula HOM05D006996 ORTHO05D008961 1.2e-26 122.5 64 85.9
SpUn0024_0080 Schrenkiella parvula HOM05D006996 ORTHO05D008961 1.2e-26 122.5 64 85.9
Cc05_g04850 Coffea canephora HOM05D006996 ORTHO05D008961 1.6e-26 122.1 64 84.4
GSVIVG01012649001 Vitis vinifera HOM05D006996 ORTHO05D008961 1.6e-26 122.1 61 85.2
CSS0007447 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 2.0e-26 121.7 63 81.0
CsaV3_7G003680 Cucumis sativus L. HOM05D006996 ORTHO05D008961 2.0e-26 121.7 64 82.8
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 2.7e-26 121.3 60 86.7
MELO3C018811.2 Cucumis melo HOM05D006996 ORTHO05D008961 2.7e-26 121.3 64 82.8
Actinidia30517 Actinidia chinensis HOM05D006996 ORTHO05D008961 3.5e-26 120.9 60 85.0
Nn2g12174 Nelumbo nucifera HOM05D006996 ORTHO05D008961 3.5e-26 120.9 61 83.6
CSS0016840 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 5.9e-26 120.2 63 81.0
Peaxi162Scf00007g00930 Petunia axillaris HOM05D006996 ORTHO05D008961 7.7e-26 119.8 64 82.8
Sed0014620 Sechium edule HOM05D006996 ORTHO05D008961 7.7e-26 119.8 64 81.2
Sopen07g026050 Solanum pennellii HOM05D006996 ORTHO05D008961 1.0e-25 119.4 59 83.1
THA.LOC104800987 Tarenaya hassleriana HOM05D006996 ORTHO05D008961 1.0e-25 119.4 64 84.4
CDE05G0144 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 1.3e-25 119.0 61 83.6
Oeu027249.1 Olea europaea HOM05D006996 ORTHO05D008961 1.3e-25 119.0 64 82.8
Sabra18G0080400 Salix brachista HOM05D006996 ORTHO05D008961 1.3e-25 119.0 58 87.9
unitig_21.g20728 Utricularia gibba HOM05D006996 ORTHO05D008961 1.3e-25 119.0 60 85.0
Solyc07g052420.3 Solanum lycopersicum HOM05D006996 ORTHO05D008961 1.7e-25 118.6 59 83.1
CDE11G0800 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 2.3e-25 118.2 62 82.3
PGSC0003DMG400025488 Solanum tuberosum HOM05D006996 ORTHO05D008961 2.3e-25 118.2 59 81.4
DCAR_014473 Daucus carota HOM05D006996 ORTHO05D008961 2.9e-25 117.9 64 82.8
vmacro09127 Vaccinium macrocarpon HOM05D006996 ORTHO05D008961 2.9e-25 117.9 63 79.4
ECA248G0348 Erigeron canadensis HOM05D006996 ORTHO05D008961 3.8e-25 117.5 64 79.7
Potri.018G093501 Populus trichocarpa HOM05D006996 ORTHO05D008961 3.8e-25 117.5 58 86.2
Sc12g0002320 Simmondsia chinensis HOM05D006996 ORTHO05D008961 3.8e-25 117.5 60 83.3
ClCG02G001860 Citrullus lanatus HOM05D006996 ORTHO05D008961 5.0e-25 117.1 64 79.7
Nitab4.5_0002137g0190 Nicotiana tabacum HOM05D006996 ORTHO05D008961 6.6e-25 116.7 64 79.7
EL10Ac5g11141 Beta vulgaris HOM05D006996 ORTHO05D008961 1.5e-24 115.5 59 81.4
TAR627G0363 Trochodendron aralioides HOM05D006996 ORTHO05D008961 1.9e-24 115.2 61 82.0
Nitab4.5_0007092g0010 Nicotiana tabacum HOM05D006996 ORTHO05D008961 2.5e-24 114.8 64 81.2
Lsat_1_v5_gn_5_163860 Lactuca sativa HOM05D006996 ORTHO05D008961 3.3e-24 114.4 60 78.3
CAN.G846.6 Capsicum annuum HOM05D006996 ORTHO05D008961 4.3e-24 114.0 59 79.7
HPP92_011134 Vanilla planifolia HOM05D006996 ORTHO05D008961 5.6e-24 113.6 64 79.7
HanXRQChr11g0350381 Helianthus annuus HOM05D006996 ORTHO05D008961 7.3e-24 113.2 64 79.7
Ah.11g047700 Amaranthus hybridus HOM05D006996 ORTHO05D008961 9.5e-24 112.8 59 79.7
Lsat_1_v5_gn_4_184120 Lactuca sativa HOM05D006996 ORTHO05D008961 1.6e-23 112.1 60 75.0
Migut.M00413 Erythranthe guttata HOM05D006996 ORTHO05D008961 2.8e-23 111.3 63 81.0
Hund01114 Selenicereus undatus HOM05D006996 ORTHO05D008961 2.8e-23 111.3 64 79.7
PSO541G2316 Papaver somniferum HOM05D006996 ORTHO05D008961 6.1e-23 110.2 60 78.3
PSO675G8615 Papaver somniferum HOM05D006996 ORTHO05D008961 6.1e-23 110.2 60 78.3
AUR62000730 Chenopodium quinoa HOM05D006996 ORTHO05D008961 1.7e-20 102.1 63 71.4
AUR62021549 Chenopodium quinoa HOM05D006996 ORTHO05D008961 1.7e-20 102.1 63 71.4
AUR62008544 Chenopodium quinoa HOM05D006996 ORTHO05D008961 8.3e-20 99.8 63 71.4
SalBow7G3715 Salvia bowleyana HOM05D006996 ORTHO05D008961 1.1e-19 99.4 64 75.0
TPR.G35081 Trifolium pratense HOM05D006996 ORTHO05D048925 2.5e-16 88.2 41 95.1
BcaB01g06120 Brassica carinata HOM05D006996 ORTHO05D008961 3.7e-12 74.3 42 81.0
Mapoly0024s0016 Marchantia polymorpha HOM05D006996 ORTHO05D008961 3.2e-11 71.2 67 52.2
FAN09G4817 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.6e-10 68.9 38 78.9
TAR676G0001 Trochodendron aralioides HOM05D006996 ORTHO05D008961 2.7e-10 68.2 33 81.8
CSS0002917 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 6.0e-10 67.0 40 72.5
CSS0018135 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.3e-09 65.9 40 70.0
COL.COLO4_06384 Corchorus olitorius HOM05D006996 ORTHO05D008961 3.9e-09 64.3 26 96.2
MCO13G082 Micromonas commoda HOM05D006996 ORTHO05D008961 9.5e-08 59.7 39 66.7


User provided reference genes

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