Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 2.2e-90 335.5 157 100.0
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 1.9e-65 252.7 121 95.9
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 1.9e-65 252.7 121 95.9
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 3.5e-64 248.4 121 93.4
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 6.3e-61 237.7 121 89.3
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 1.1e-60 236.9 121 87.6
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 4.1e-60 235.0 121 87.6
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 9.0e-60 233.8 121 86.8
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.7e-58 229.6 116 89.7
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 1.7e-58 229.6 139 77.0
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 5.0e-58 228.0 139 77.7
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 5.0e-58 228.0 139 77.7
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 1.1e-57 226.9 121 84.3
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 1.4e-57 226.5 116 87.1
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 1.4e-57 226.5 121 81.8
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 1.9e-57 226.1 137 76.6
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 1.9e-57 226.1 116 87.1
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 2.5e-57 225.7 121 83.5
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 4.2e-57 224.9 137 75.9
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 5.5e-57 224.6 116 86.2
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 5.5e-57 224.6 138 73.2
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 7.2e-57 224.2 121 81.0
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 1.6e-56 223.0 119 82.4
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 1.6e-56 223.0 139 73.4
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.6e-56 223.0 117 84.6
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 3.6e-56 221.9 121 80.2
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 3.6e-56 221.9 139 72.7
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.6e-56 221.9 139 72.7
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.6e-56 221.9 139 72.7
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 3.6e-56 221.9 121 82.6
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 4.6e-56 221.5 117 82.1
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 4.6e-56 221.5 116 84.5
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 6.1e-56 221.1 116 85.3
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 6.1e-56 221.1 116 84.5
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 7.9e-56 220.7 116 83.6
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 7.9e-56 220.7 137 73.7
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 1.0e-55 220.3 121 80.2
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 1.3e-55 219.9 121 80.2
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.3e-55 219.9 137 75.2
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 1.8e-55 219.5 121 79.3
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 1.8e-55 219.5 116 83.6
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.8e-55 219.5 139 70.5
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.3e-55 219.2 116 84.5
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 2.3e-55 219.2 137 73.7
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 2.3e-55 219.2 137 75.2
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 3.0e-55 218.8 116 81.0
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 3.0e-55 218.8 137 73.7
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 3.9e-55 218.4 139 69.8
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 3.9e-55 218.4 137 74.5
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 6.7e-55 217.6 120 80.0
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 6.7e-55 217.6 137 71.5
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 1.5e-54 216.5 134 73.1
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 1.5e-54 216.5 137 73.7
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 1.9e-54 216.1 116 82.8
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 1.9e-54 216.1 137 70.8
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 2.5e-54 215.7 121 76.0
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 3.3e-54 215.3 138 69.6
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 4.3e-54 214.9 121 75.2
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 4.3e-54 214.9 136 72.1
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 4.3e-54 214.9 122 79.5
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 9.7e-54 213.8 138 68.8
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 1.3e-53 213.4 121 75.2
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 1.3e-53 213.4 121 75.2
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 1.3e-53 213.4 121 75.2
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 1.3e-53 213.4 137 70.8
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 1.6e-53 213.0 121 74.4
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 1.6e-53 213.0 121 76.9
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 1.6e-53 213.0 134 70.1
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 2.2e-53 212.6 121 75.2
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 2.2e-53 212.6 121 76.9
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.2e-53 212.6 121 76.9
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 2.8e-53 212.2 121 74.4
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 4.8e-53 211.5 121 75.2
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 4.8e-53 211.5 121 74.4
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 8.2e-53 210.7 137 71.5
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 8.2e-53 210.7 121 77.7
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 8.2e-53 210.7 137 71.5
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 1.1e-52 210.3 121 74.4
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 1.1e-52 210.3 138 71.7
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 1.8e-52 209.5 121 75.2
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 2.4e-52 209.1 137 73.0
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 5.3e-52 208.0 116 80.2
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 5.3e-52 208.0 121 74.4
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 5.3e-52 208.0 139 66.9
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 6.9e-52 207.6 119 79.0
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 1.5e-51 206.5 138 71.0
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 1.5e-51 206.5 116 82.8
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 2.0e-51 206.1 116 78.4
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 2.6e-51 205.7 140 65.0
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 4.5e-51 204.9 129 69.8
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 4.5e-51 204.9 129 69.8
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 5.0e-50 201.4 116 76.7
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 8.5e-50 200.7 145 64.8
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 1.1e-49 200.3 122 73.8
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.9e-49 199.5 144 63.2
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 5.5e-49 198.0 116 75.0
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.2e-48 196.8 144 62.5
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 1.2e-48 196.8 121 71.9
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 3.6e-48 195.3 122 72.1
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 6.1e-48 194.5 140 62.9
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 5.1e-47 191.4 201 49.3
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 8.8e-47 190.7 122 70.5
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 1.5e-46 189.9 121 68.6
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 2.6e-46 189.1 122 66.4
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 4.4e-46 188.3 121 73.6
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 5.7e-46 188.0 93 88.2
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 1.7e-45 186.4 93 88.2
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 6.9e-44 181.0 121 69.4
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 2.6e-43 179.1 104 76.0
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 5.9e-43 177.9 96 82.3
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 7.7e-43 177.6 93 83.9
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 2.5e-41 172.6 93 83.9
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 2.7e-40 169.1 121 57.9
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 3.9e-39 165.2 93 77.4
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 6.7e-39 164.5 116 59.5
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 2.8e-37 159.1 121 57.0
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 2.2e-34 149.4 111 61.3
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.8e-34 148.7 141 54.6
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 8.5e-34 147.5 83 75.9
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 1.5e-33 146.7 107 63.6
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.8e-31 139.8 122 59.0
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 9.7e-30 134.0 119 54.6
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 2.4e-28 129.4 67 86.6
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 4.1e-28 128.6 116 56.9
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 4.1e-28 128.6 66 87.9
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 7.7e-27 124.4 67 83.6
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 1.0e-18 97.4 66 63.6


User provided reference genes

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