Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 5.1e-51 204.1 104 100.0
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 1.2e-44 183.0 104 89.4
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 2.0e-39 165.6 104 79.8
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 3.4e-39 164.9 102 80.4
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 4.2e-37 157.9 104 77.9
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 3.0e-35 151.8 104 74.0
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 5.1e-35 151.0 86 87.2
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 1.1e-34 149.8 102 76.5
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 2.5e-34 148.7 95 74.7
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 2.6e-31 138.7 93 72.0
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 1.7e-30 136.0 102 65.7
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 1.7e-30 136.0 91 76.9
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 2.2e-30 135.6 94 70.2
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 2.2e-30 135.6 104 65.4
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 3.8e-30 134.8 101 67.3
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 4.9e-30 134.4 101 67.3
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 6.5e-30 134.0 94 66.0
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 6.5e-30 134.0 93 72.0
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 6.5e-30 134.0 92 72.8
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 6.5e-30 134.0 90 75.6
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 8.4e-30 133.7 94 70.2
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 8.4e-30 133.7 87 75.9
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 8.4e-30 133.7 86 75.6
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 1.1e-29 133.3 104 65.4
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 1.1e-29 133.3 88 72.7
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 1.1e-29 133.3 87 74.7
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 1.1e-29 133.3 87 73.6
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 1.1e-29 133.3 87 73.6
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 1.1e-29 133.3 87 73.6
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 1.4e-29 132.9 93 71.0
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 1.4e-29 132.9 92 73.9
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 1.4e-29 132.9 92 73.9
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 1.4e-29 132.9 92 73.9
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 1.4e-29 132.9 86 76.7
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 1.9e-29 132.5 95 65.3
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 1.9e-29 132.5 93 73.1
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 1.9e-29 132.5 104 64.4
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.9e-29 132.5 86 73.3
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 2.5e-29 132.1 94 71.3
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 3.2e-29 131.7 94 69.1
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 3.2e-29 131.7 93 73.1
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 4.2e-29 131.3 91 71.4
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 4.2e-29 131.3 91 71.4
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 4.2e-29 131.3 88 72.7
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 4.2e-29 131.3 104 64.4
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 5.5e-29 131.0 88 71.6
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 7.1e-29 130.6 104 64.4
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 9.3e-29 130.2 86 73.3
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 1.2e-28 129.8 102 65.7
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 1.2e-28 129.8 99 66.7
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.6e-28 129.4 88 73.9
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 2.7e-28 128.6 84 71.4
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 4.6e-28 127.9 98 66.3
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 6.0e-28 127.5 93 64.5
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 6.0e-28 127.5 95 65.3
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 1.0e-27 126.7 104 63.5
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 1.0e-27 126.7 98 65.3
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 1.3e-27 126.3 93 68.8
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.3e-27 126.3 93 64.5
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 1.8e-27 125.9 98 65.3
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 2.3e-27 125.6 86 68.6
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 2.3e-27 125.6 87 70.1
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 2.3e-27 125.6 91 64.8
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 3.0e-27 125.2 88 69.3
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 3.0e-27 125.2 95 66.3
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 3.9e-27 124.8 95 65.3
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 5.1e-27 124.4 104 61.5
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 5.1e-27 124.4 89 67.4
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 6.7e-27 124.0 83 71.1
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 6.7e-27 124.0 86 70.9
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 1.5e-26 122.9 93 62.4
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 1.9e-26 122.5 88 69.3
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 2.5e-26 122.1 98 63.3
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 4.3e-26 121.3 88 65.9
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 7.4e-26 120.6 86 66.3
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 7.4e-26 120.6 94 64.9
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 2.1e-25 119.0 85 65.9
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 3.7e-25 118.2 93 61.3
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 6.2e-25 117.5 86 65.1
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 1.1e-24 116.7 94 62.8
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 1.4e-24 116.3 86 64.0
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 1.8e-24 115.9 94 58.5
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 2.4e-24 115.5 86 65.1
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 2.4e-24 115.5 93 60.2
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 2.4e-24 115.5 88 62.5
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 5.3e-24 114.4 89 59.6
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 1.5e-23 112.8 84 61.9
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 1.5e-23 112.8 84 61.9
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 1.5e-23 112.8 84 61.9
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 1.5e-23 112.8 84 61.9
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 1.5e-23 112.8 84 61.9
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 2.6e-23 112.1 88 67.0
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 3.4e-23 111.7 86 62.8
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 4.5e-23 111.3 82 63.4
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 5.8e-23 110.9 88 62.5
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 1.7e-22 109.4 98 56.1
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 2.9e-22 108.6 80 66.2
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 5.0e-22 107.8 82 62.2
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 6.5e-22 107.5 80 65.0
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 7.2e-21 104.0 93 55.9
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 7.2e-21 104.0 77 67.5
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 7.2e-21 104.0 84 58.3
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 6.7e-19 97.4 63 74.6
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 1.9e-18 95.9 93 53.8
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 3.3e-18 95.1 92 47.8
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 7.4e-18 94.0 92 46.7
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 6.9e-16 87.4 82 56.1
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 2.0e-15 85.9 81 44.4
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 1.7e-14 82.8 90 44.4
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 9.4e-13 77.0 72 51.4
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 7.9e-12 73.9 84 41.7
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 3.3e-10 68.6 82 37.8
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 2.8e-09 65.5 85 42.4
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 6.3e-09 64.3 80 40.0


User provided reference genes

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