Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g210320 Pisum sativum HOM05D003697 ORTHO05D005452 1.0e-66 256.5 122 100.0
Psat5g210280 Pisum sativum HOM05D003697 ORTHO05D005452 1.9e-52 209.1 103 95.1
Psat7g240960 Pisum sativum HOM05D003697 ORTHO05D005452 1.6e-51 206.1 106 91.5
Psat1g220480 Pisum sativum HOM05D003697 ORTHO05D005452 1.7e-50 202.6 103 92.2
Medtr2g006960 Medicago truncatula HOM05D003697 ORTHO05D005452 3.9e-50 201.4 103 91.3
Ca_00071_v3 Cicer arietinum L. HOM05D003697 ORTHO05D005452 8.6e-50 200.3 103 90.3
Phvul.006G215600 Phaseolus vulgaris HOM05D003697 ORTHO05D005452 1.5e-49 199.5 103 89.3
TPR.G2085 Trifolium pratense HOM05D003697 ORTHO05D005452 1.5e-49 199.5 103 90.3
VMungo0540G0442 Vigna mungo HOM05D003697 ORTHO05D005452 1.9e-49 199.1 103 88.3
Lj6g0024422 Lotus japonicus HOM05D003697 ORTHO05D005452 4.3e-49 198.0 103 88.3
Ciclev10000024m.g Citrus clementina HOM05D003697 ORTHO05D005452 7.3e-49 197.2 103 87.4
Thhalv10018004m.g Eutrema salsugineum HOM05D003697 ORTHO05D005452 7.3e-49 197.2 103 88.3
Glyma.08G187500 Glycine max HOM05D003697 ORTHO05D005452 7.3e-49 197.2 103 87.4
Sp5g26380 Schrenkiella parvula HOM05D003697 ORTHO05D005452 7.3e-49 197.2 103 88.3
CiPaw.06G146300 Carya illinoinensis HOM05D003697 ORTHO05D005452 9.5e-49 196.8 103 88.3
MELO3C019456.2 Cucumis melo HOM05D003697 ORTHO05D005452 9.5e-49 196.8 103 87.4
AL2G30830 Arabidopsis lyrata HOM05D003697 ORTHO05D005452 1.6e-48 196.1 103 87.4
BcaB03g14879 Brassica carinata HOM05D003697 ORTHO05D005452 1.6e-48 196.1 103 87.4
A07p37570 Brassica napus HOM05D003697 ORTHO05D005452 1.6e-48 196.1 103 87.4
C06p45330 Brassica napus HOM05D003697 ORTHO05D005452 1.6e-48 196.1 103 87.4
BraA07t31318Z Brassica rapa HOM05D003697 ORTHO05D005452 1.6e-48 196.1 103 87.4
QL02p099301 Quercus lobata HOM05D003697 ORTHO05D005452 2.1e-48 195.7 103 87.4
CANSAT11G1101 Cannabis sativa HOM05D003697 ORTHO05D005452 2.8e-48 195.3 103 86.4
CsaV3_3G019150 Cucumis sativus L. HOM05D003697 ORTHO05D005452 2.8e-48 195.3 103 86.4
CAN.G798.13 Capsicum annuum HOM05D003697 ORTHO05D005452 3.6e-48 194.9 103 87.4
Peaxi162Scf00011g00526 Petunia axillaris HOM05D003697 ORTHO05D005452 3.6e-48 194.9 103 87.4
Solyc01g104040.4 Solanum lycopersicum HOM05D003697 ORTHO05D005452 3.6e-48 194.9 103 87.4
Sopen01g046450 Solanum pennellii HOM05D003697 ORTHO05D005452 3.6e-48 194.9 103 87.4
GSVIVG01022867001 Vitis vinifera HOM05D003697 ORTHO05D005452 3.6e-48 194.9 103 87.4
Aqoxy5G02635 Aquilegia oxysepala HOM05D003697 ORTHO05D005452 4.7e-48 194.5 103 87.4
Duzib248G1637 Durio zibethinus HOM05D003697 ORTHO05D005452 4.7e-48 194.5 103 86.4
Eucgr.I02739 Eucalyptus grandis HOM05D003697 ORTHO05D005452 4.7e-48 194.5 103 87.4
Nitab4.5_0008466g0010 Nicotiana tabacum HOM05D003697 ORTHO05D005452 4.7e-48 194.5 103 86.4
BcaC08g46557 Brassica carinata HOM05D003697 ORTHO05D005452 6.2e-48 194.1 103 86.4
BolC6t39589H Brassica oleracea HOM05D003697 ORTHO05D005452 6.2e-48 194.1 103 86.4
COL.COLO4_11778 Corchorus olitorius HOM05D003697 ORTHO05D005452 6.2e-48 194.1 103 86.4
Migut.B00820 Erythranthe guttata HOM05D003697 ORTHO05D005452 6.2e-48 194.1 103 87.4
MD15G1427500 Malus domestica HOM05D003697 ORTHO05D005452 6.2e-48 194.1 103 87.4
RcHm_v2.0_Chr7g0221551 Rosa chinensis HOM05D003697 ORTHO05D005452 6.2e-48 194.1 103 87.4
AT1G71220 Arabidopsis thaliana HOM05D003697 ORTHO05D005452 8.0e-48 193.7 103 85.4
Carub.0002s1810 Capsella rubella HOM05D003697 ORTHO05D005452 8.0e-48 193.7 103 86.4
CARHR064520 Cardamine hirsuta HOM05D003697 ORTHO05D005452 8.0e-48 193.7 103 86.4
FvH4_5g28990 Fragaria vesca HOM05D003697 ORTHO05D005452 8.0e-48 193.7 103 86.4
Lalb_Chr13g0295701 Lupinus albus HOM05D003697 ORTHO05D005452 8.0e-48 193.7 103 86.4
PGR142G1992 Punica granatum HOM05D003697 ORTHO05D005452 1.1e-47 193.4 103 86.4
TWI14G0038 Tripterygium wilfordii HOM05D003697 ORTHO05D005452 1.1e-47 193.4 103 86.4
arahy.Tifrunner.gnm1.ann1.6LDV6M Arachis hypogaea HOM05D003697 ORTHO05D005452 1.4e-47 193.0 103 85.4
arahy.Tifrunner.gnm1.ann1.IR21Q7 Arachis hypogaea HOM05D003697 ORTHO05D005452 1.4e-47 193.0 103 85.4
MD08G1235900 Malus domestica HOM05D003697 ORTHO05D005452 1.4e-47 193.0 103 86.4
Prupe.1G572000 Prunus persica HOM05D003697 ORTHO05D005452 1.4e-47 193.0 103 86.4
Thecc.02G088500 Theobroma cacao HOM05D003697 ORTHO05D005452 1.8e-47 192.6 103 85.4
vmacro19883 Vaccinium macrocarpon HOM05D003697 ORTHO05D005452 1.8e-47 192.6 103 86.4
SalBow7G4621 Salvia bowleyana HOM05D003697 ORTHO05D005452 2.3e-47 192.2 103 86.4
Sed0005890 Sechium edule HOM05D003697 ORTHO05D005452 2.3e-47 192.2 103 85.4
TAR381G0967 Trochodendron aralioides HOM05D003697 ORTHO05D005452 2.3e-47 192.2 103 86.4
Atru.chr3.1599 Acer truncatum HOM05D003697 ORTHO05D005452 3.1e-47 191.8 103 84.5
Atru.chr3.1607 Acer truncatum HOM05D003697 ORTHO05D005452 3.1e-47 191.8 103 84.5
FAN08G0197 Fragaria x ananassa HOM05D003697 ORTHO05D005452 3.1e-47 191.8 103 86.4
Lsat_1_v5_gn_9_118481 Lactuca sativa HOM05D003697 ORTHO05D005452 3.1e-47 191.8 103 86.4
Manes.10G121900 Manihot esculenta HOM05D003697 ORTHO05D005452 3.1e-47 191.8 103 84.5
Nn1g08409 Nelumbo nucifera HOM05D003697 ORTHO05D005452 3.1e-47 191.8 103 84.5
CSS0042528 Camellia sinensis var. sinensis HOM05D003697 ORTHO05D005452 4.0e-47 191.4 103 84.5
Gohir.A04G121300 Gossypium hirsutum HOM05D003697 ORTHO05D005452 4.0e-47 191.4 103 84.5
Mapoly0156s0022 Marchantia polymorpha HOM05D003697 ORTHO05D005452 4.0e-47 191.4 103 85.4
SEGI_03237 Sequoiadendron giganteum HOM05D003697 ORTHO05D005452 4.0e-47 191.4 103 85.4
Haze_01738 Corylus avellana HOM05D003697 ORTHO05D005452 5.2e-47 191.0 103 85.4
Glyma.08G127200 Glycine max HOM05D003697 ORTHO05D005452 5.2e-47 191.0 103 84.5
Gohir.A12G027900 Gossypium hirsutum HOM05D003697 ORTHO05D005452 5.2e-47 191.0 103 84.5
Gohir.D12G027400 Gossypium hirsutum HOM05D003697 ORTHO05D005452 5.2e-47 191.0 103 84.5
Gorai.008G027900 Gossypium raimondii HOM05D003697 ORTHO05D005452 5.2e-47 191.0 103 84.5
Cfa005504 Carpinus fangiana HOM05D003697 ORTHO05D005452 6.8e-47 190.7 103 85.4
CDE06G0802 Ceratophyllum demersum HOM05D003697 ORTHO05D005452 6.8e-47 190.7 103 83.5
Nitab4.5_0000816g0140 Nicotiana tabacum HOM05D003697 ORTHO05D005452 6.8e-47 190.7 100 87.0
THA.LOC104801984 Tarenaya hassleriana HOM05D003697 ORTHO05D005452 6.8e-47 190.7 103 84.5
Actinidia06460 Actinidia chinensis HOM05D003697 ORTHO05D005452 8.9e-47 190.3 103 84.5
Actinidia26154 Actinidia chinensis HOM05D003697 ORTHO05D005452 8.9e-47 190.3 103 84.5
Gohir.D04G163800 Gossypium hirsutum HOM05D003697 ORTHO05D005452 8.9e-47 190.3 103 83.5
Oeu027795.2 Olea europaea HOM05D003697 ORTHO05D005452 8.9e-47 190.3 103 85.4
Rhsim05G0119800 Rhododendron simsii HOM05D003697 ORTHO05D005452 8.9e-47 190.3 103 84.5
Cc02_g22700 Coffea canephora HOM05D003697 ORTHO05D005452 1.2e-46 189.9 103 85.4
Potri.003G018900 Populus trichocarpa HOM05D003697 ORTHO05D005452 1.2e-46 189.9 103 84.5
Sabra03G0010400 Salix brachista HOM05D003697 ORTHO05D005452 1.2e-46 189.9 103 84.5
Sc02g0002740 Simmondsia chinensis HOM05D003697 ORTHO05D005452 1.2e-46 189.9 103 83.5
Duzib132G0461 Durio zibethinus HOM05D003697 ORTHO05D005452 1.5e-46 189.5 103 84.5
ATR1136G197 Amborella trichopoda HOM05D003697 ORTHO05D005452 2.0e-46 189.1 103 82.5
ECA240G1790 Erigeron canadensis HOM05D003697 ORTHO05D005452 2.0e-46 189.1 103 84.5
HanXRQChr09g0249001 Helianthus annuus HOM05D003697 ORTHO05D005452 2.0e-46 189.1 103 84.5
HPP92_015204 Vanilla planifolia HOM05D003697 ORTHO05D005452 2.0e-46 189.1 103 83.5
Os02g0664200 Oryza sativa ssp. japonica HOM05D003697 ORTHO05D005452 2.6e-46 188.7 103 84.5
PSO170G2453 Papaver somniferum HOM05D003697 ORTHO05D005452 2.6e-46 188.7 103 83.5
DCAR_006698 Daucus carota HOM05D003697 ORTHO05D005452 4.4e-46 188.0 103 83.5
Hma1.2p1_0217F.1_g092200 Hydrangea macrophylla HOM05D003697 ORTHO05D005452 4.4e-46 188.0 103 82.5
Hma1.2p1_0217F.1_g092210 Hydrangea macrophylla HOM05D003697 ORTHO05D005452 4.4e-46 188.0 103 82.5
AUR62037329 Chenopodium quinoa HOM05D003697 ORTHO05D005452 7.5e-46 187.2 103 81.6
AUR62042597 Chenopodium quinoa HOM05D003697 ORTHO05D005452 7.5e-46 187.2 103 81.6
PSO017G4515 Papaver somniferum HOM05D003697 ORTHO05D005452 7.5e-46 187.2 103 82.5
Atru.chr6.584 Acer truncatum HOM05D003697 ORTHO05D005452 9.8e-46 186.8 100 84.0
MSTRG.20304 Avicennia marina HOM05D003697 ORTHO05D005452 9.8e-46 186.8 103 83.5
CBR_g48619 Chara braunii HOM05D003697 ORTHO05D005452 9.8e-46 186.8 103 83.5
Glyma.05G168600 Glycine max HOM05D003697 ORTHO05D005452 1.3e-45 186.4 103 81.6
Dinv24296 Davidia involucrata HOM05D003697 ORTHO05D005452 1.7e-45 186.0 103 81.6
Eucgr.H01580 Eucalyptus grandis HOM05D003697 ORTHO05D005452 1.7e-45 186.0 103 83.5
EL10Ac4g08781 Beta vulgaris HOM05D003697 ORTHO05D005452 2.9e-45 185.3 103 81.6
SMO276G0030 Selaginella moellendorffii HOM05D003697 ORTHO05D005452 2.9e-45 185.3 103 81.6
Gorai.012G151700 Gossypium raimondii HOM05D003697 ORTHO05D005452 8.3e-45 183.7 121 71.1
Zm00001eb258320 Zea mays HOM05D003697 ORTHO05D005452 8.3e-45 183.7 103 81.6
FAN04G3000 Fragaria x ananassa HOM05D003697 ORTHO05D005452 2.4e-44 182.2 118 75.4
Pp3c3_14060 Physcomitrium patens HOM05D003697 ORTHO05D005452 2.4e-44 182.2 103 80.6
AagrBONN_evm.TU.Sc2ySwM_362.2359 Anthoceros agrestis HOM05D003697 ORTHO05D005452 4.1e-44 181.4 103 80.6
FAN13G2190 Fragaria x ananassa HOM05D003697 ORTHO05D005452 4.1e-44 181.4 120 74.2
ClCG05G009590 Citrullus lanatus HOM05D003697 ORTHO05D005452 6.2e-40 167.5 86 87.2
FAN18G2119 Fragaria x ananassa HOM05D003697 ORTHO05D005452 5.2e-39 164.5 86 86.0
Aa31LG4G9290 Aethionema arabicum HOM05D003697 ORTHO05D005452 6.8e-39 164.1 86 87.2
MCO01G725 Micromonas commoda HOM05D003697 ORTHO05D005452 9.9e-38 160.2 103 68.9
SGA_v2.0_scaffold110G31335 Striga asiatica HOM05D003697 ORTHO05D005452 5.4e-36 154.5 86 81.4
Ah.04g162670 Amaranthus hybridus HOM05D003697 ORTHO05D005452 1.3e-34 149.8 103 71.8
PRCOL_00004479 Prasinoderma coloniale HOM05D003697 ORTHO05D005452 3.3e-33 145.2 103 62.1
Eucgr.H01552 Eucalyptus grandis HOM05D003697 ORTHO05D005452 1.1e-31 140.2 103 68.0
Cfa024915 Carpinus fangiana HOM05D003697 ORTHO05D005452 2.4e-31 139.0 102 62.7
ECA233G0288 Erigeron canadensis HOM05D003697 ORTHO05D005452 1.1e-25 120.2 103 62.1
Psat3g186600 Pisum sativum HOM05D003697 ORTHO05D005452 9.6e-25 117.1 59 88.1
Lj5C253T9 Lonicera japonica HOM05D003697 ORTHO05D005452 1.7e-21 106.3 51 92.2
Psat6g132920 Pisum sativum HOM05D003697 ORTHO05D005452 3.5e-19 98.6 57 80.7
Psat0s4378g0040 Pisum sativum HOM05D012210 ORTHO05D005452 5.1e-18 94.7 51 84.3
Psat1g073840 Pisum sativum HOM05D012210 ORTHO05D005452 5.1e-18 94.7 51 84.3
Psat3g096360 Pisum sativum HOM05D003697 ORTHO05D323777 1.0e-10 70.5 36 83.3
Psat1g072720 Pisum sativum HOM05D003697 ORTHO05D005452 4.8e-08 61.6 31 83.9
Psat6g235600 Pisum sativum HOM05D012210 ORTHO05D005452 4.8e-08 61.6 31 83.9
unitig_749.g14126 Utricularia gibba HOM05D003697 ORTHO05D005452 6.2e-08 61.2 47 66.0


User provided reference genes

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