Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g210040 Pisum sativum HOM05D007776 ORTHO05D009812 2.0e-106 389.0 191 100.0
Ca_14480_v3 Cicer arietinum L. HOM05D007776 ORTHO05D009812 1.8e-65 253.1 201 67.2
Medtr0045s0130 Medicago truncatula HOM05D007776 ORTHO05D009812 1.1e-56 223.8 183 65.6
TPR.G27845 Trifolium pratense HOM05D000479 ORTHO05D009812 2.5e-56 222.6 197 61.4
Lalb_Chr25g0282901 Lupinus albus HOM05D007776 ORTHO05D009812 2.5e-35 152.9 207 49.3
VMungo1080G1686 Vigna mungo HOM05D007776 ORTHO05D009812 6.1e-34 148.3 206 48.1
Lj3g0020626 Lotus japonicus HOM05D007776 ORTHO05D009812 8.8e-33 144.4 186 49.5
Phvul.005G023800 Phaseolus vulgaris HOM05D007776 ORTHO05D009812 2.6e-29 132.9 206 44.7
Glyma.10G090400 Glycine max HOM05D007776 ORTHO05D009812 8.8e-25 117.9 205 42.0
CANSAT25G0596 Cannabis sativa HOM05D007776 ORTHO05D009812 9.7e-24 114.4 122 57.4
Manes.02G198100 Manihot esculenta HOM05D007776 ORTHO05D009812 1.4e-22 110.5 188 42.0
Potri.013G107300 Populus trichocarpa HOM05D007776 ORTHO05D009812 7.0e-22 108.2 131 51.1
Prupe.1G555000 Prunus persica HOM05D007776 ORTHO05D009812 7.0e-22 108.2 112 52.7
Ciclev10002690m.g Citrus clementina HOM05D007776 ORTHO05D009812 9.1e-22 107.8 165 42.4
Glyma.15G276200 Glycine max HOM05D007776 ORTHO05D009812 1.2e-21 107.5 79 69.6
CiPaw.07G236300 Carya illinoinensis HOM05D007776 ORTHO05D009812 3.5e-21 105.9 137 47.4
CiPaw.05G123100 Carya illinoinensis HOM05D007776 ORTHO05D009812 5.9e-21 105.1 124 50.0
Gohir.D05G288000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 7.7e-21 104.8 155 42.6
Gorai.009G303100 Gossypium raimondii HOM05D007776 ORTHO05D009812 7.7e-21 104.8 155 42.6
RcHm_v2.0_Chr7g0227891 Rosa chinensis HOM05D007776 ORTHO05D009812 1.0e-20 104.4 109 55.0
Sed0008767 Sechium edule HOM05D007776 ORTHO05D009812 1.7e-20 103.6 129 47.3
Nn5g27525 Nelumbo nucifera HOM05D007776 ORTHO05D009812 2.9e-20 102.8 129 50.4
Sp1g30150 Schrenkiella parvula HOM05D007776 ORTHO05D009812 2.9e-20 102.8 117 48.7
PGR042G2621 Punica granatum HOM05D007776 ORTHO05D009812 6.5e-20 101.7 136 47.1
TWI14G0313 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 6.5e-20 101.7 115 51.3
FAN04G1877 Fragaria x ananassa HOM05D007776 ORTHO05D009812 8.5e-20 101.3 114 54.4
A09p31800 Brassica napus HOM05D007776 ORTHO05D009812 1.1e-19 100.9 119 50.4
FAN08G2421 Fragaria x ananassa HOM05D007776 ORTHO05D009812 2.5e-19 99.8 114 53.5
Haze_21304 Corylus avellana HOM05D007776 ORTHO05D009812 3.2e-19 99.4 128 45.3
Gohir.A05G287000 Gossypium hirsutum HOM05D007776 ORTHO05D009812 5.5e-19 98.6 154 41.6
THA.LOC104806792 Tarenaya hassleriana HOM05D007776 ORTHO05D009812 5.5e-19 98.6 139 44.6
AL1G50270 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 7.2e-19 98.2 120 45.0
Sabra13G0092600 Salix brachista HOM05D007776 ORTHO05D009812 7.2e-19 98.2 127 50.4
FAN04G0521 Fragaria x ananassa HOM05D007776 ORTHO05D009812 9.4e-19 97.8 114 52.6
Aa31LG6G8730 Aethionema arabicum HOM05D007776 ORTHO05D009812 2.1e-18 96.7 121 45.5
FvH4_5g31870 Fragaria vesca HOM05D007776 ORTHO05D009812 2.1e-18 96.7 105 56.2
MD15G1406800 Malus domestica HOM05D007776 ORTHO05D009812 2.1e-18 96.7 141 43.3
BcaC08g43737 Brassica carinata HOM05D007776 ORTHO05D009812 2.7e-18 96.3 110 50.0
BraA09t38716Z Brassica rapa HOM05D007776 ORTHO05D009812 2.7e-18 96.3 110 50.0
C06p11140 Brassica napus HOM05D007776 ORTHO05D009812 6.1e-18 95.1 115 47.0
BolC6t36249H Brassica oleracea HOM05D007776 ORTHO05D009812 6.1e-18 95.1 115 47.0
Cfa012949 Carpinus fangiana HOM05D007776 ORTHO05D009812 6.1e-18 95.1 129 47.3
FAN18G1270 Fragaria x ananassa HOM05D007776 ORTHO05D009812 1.0e-17 94.4 160 44.4
AT1G35430 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 1.4e-17 94.0 102 49.0
Carub.0001s3303 Capsella rubella HOM05D007776 ORTHO05D009812 1.8e-17 93.6 123 44.7
CARHR034200 Cardamine hirsuta HOM05D007776 ORTHO05D009812 5.2e-17 92.0 101 49.5
TWI59G0674 Tripterygium wilfordii HOM05D007776 ORTHO05D009812 6.7e-17 91.7 112 48.2
Duzib177G0943 Durio zibethinus HOM05D007776 ORTHO05D009812 4.4e-16 89.0 106 50.9
Sabra19G0091100 Salix brachista HOM05D007776 ORTHO05D009812 2.2e-15 86.7 107 48.6
Potri.019G079800 Populus trichocarpa HOM05D007776 ORTHO05D009812 3.7e-15 85.9 132 44.7
Dinv41753 Davidia involucrata HOM05D000238 ORTHO05D002999 1.8e-14 83.6 106 50.9
PGSC0003DMG400006837 Solanum tuberosum HOM05D007776 ORTHO05D009812 3.1e-14 82.8 165 40.0
Thhalv10029064m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 9.1e-14 81.3 119 44.5
Thhalv10001838m.g Eutrema salsugineum HOM05D007776 ORTHO05D009812 2.0e-13 80.1 107 43.9
ClCG11G008540 Citrullus lanatus HOM05D007776 ORTHO05D009812 5.9e-13 78.6 135 40.0
Sp6g08370 Schrenkiella parvula HOM05D007776 ORTHO05D009812 5.9e-13 78.6 134 39.6
Duzib116G0238 Durio zibethinus HOM05D007776 ORTHO05D009812 1.7e-12 77.0 120 42.5
Sopen01g034790 Solanum pennellii HOM05D007776 ORTHO05D009812 2.2e-12 76.6 115 47.8
Cpa.g.sc507.3 Carica papaya HOM05D007776 ORTHO05D009812 3.8e-12 75.9 124 37.9
Thecc.08G190700 Theobroma cacao HOM05D007776 ORTHO05D009812 1.5e-11 73.9 199 35.2
Solyc01g087860.2 Solanum lycopersicum HOM05D007776 ORTHO05D009812 2.5e-11 73.2 162 38.3
CARHR260240 Cardamine hirsuta HOM05D007776 ORTHO05D009812 3.2e-11 72.8 122 42.6
QL02p026198 Quercus lobata HOM05D007776 ORTHO05D009812 3.2e-11 72.8 106 39.6
BcaB01g02801 Brassica carinata HOM05D007776 ORTHO05D009812 9.4e-11 71.2 128 39.1
Migut.C01313 Erythranthe guttata HOM05D007776 ORTHO05D009812 3.6e-10 69.3 118 38.1
BcaC01g04727 Brassica carinata HOM05D007776 ORTHO05D009812 1.0e-09 67.8 125 38.4
C03p34420 Brassica napus HOM05D007776 ORTHO05D009812 1.4e-09 67.4 125 38.4
BolC3t15751H Brassica oleracea HOM05D007776 ORTHO05D009812 1.4e-09 67.4 125 38.4
MD08G1218400 Malus domestica HOM05D007776 ORTHO05D009812 1.8e-09 67.0 83 50.6
TAR628G0395 Trochodendron aralioides HOM05D007776 ORTHO05D009812 4.0e-09 65.9 112 42.0
AL6G42920 Arabidopsis lyrata HOM05D007776 ORTHO05D009812 2.0e-08 63.5 126 38.9
A03p28480 Brassica napus HOM05D007776 ORTHO05D009812 2.0e-08 63.5 132 38.6
BraA03t12053Z Brassica rapa HOM05D007776 ORTHO05D009812 2.0e-08 63.5 132 38.6
CSS0049282 Camellia sinensis var. sinensis HOM05D007776 ORTHO05D009812 2.6e-08 63.2 103 41.7
EL10Ac1g00128 Beta vulgaris HOM05D007776 ORTHO05D009812 5.7e-08 62.0 146 35.6
Ah.05g178510 Amaranthus hybridus HOM05D007776 ORTHO05D009812 2.2e-07 60.1 116 42.2
Rhsim12G0006900 Rhododendron simsii HOM05D007776 ORTHO05D009812 4.8e-07 58.9 93 44.1
AT4G09170 Arabidopsis thaliana HOM05D007776 ORTHO05D009812 1.8e-06 57.0 122 36.1


User provided reference genes

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