Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g208520 Pisum sativum HOM05D031307 ORTHO05D007585 8.1e-108 393.7 186 100.0
FAN05G3385 Fragaria x ananassa HOM05D006430 ORTHO05D007585 8.3e-36 154.5 91 81.3
PGR102G2076 Punica granatum HOM05D006430 ORTHO05D007585 8.5e-33 144.4 145 55.9
CiPaw.09G145300 Carya illinoinensis HOM05D006430 ORTHO05D007585 5.2e-30 135.2 70 85.7
RcHm_v2.0_Chr2g0119791 Rosa chinensis HOM05D006430 ORTHO05D007585 8.9e-22 107.8 100 60.0
BcaB02g09818 Brassica carinata HOM05D031307 ORTHO05D007585 2.9e-17 92.8 71 60.6
MBI09_g02046_MAGBIO Magnolia biondii HOM05D006430 ORTHO05D007585 2.9e-17 92.8 91 53.8
FvH4_6g20551 Fragaria vesca HOM05D006430 ORTHO05D007585 5.0e-17 92.0 46 89.1
SalBow5G5416 Salvia bowleyana HOM05D006430 ORTHO05D007585 2.8e-15 86.3 48 81.2
Lsat_1_v5_gn_7_93000 Lactuca sativa HOM05D006430 ORTHO05D007585 7.5e-13 78.2 68 61.8
Lsat_1_v5_gn_2_95121 Lactuca sativa HOM05D000015 ORTHO05D007585 3.7e-12 75.9 51 72.5
Lsat_1_v5_gn_9_87941 Lactuca sativa HOM05D006430 ORTHO05D007585 4.9e-12 75.5 52 69.2
ECA238G4454 Erigeron canadensis HOM05D006430 ORTHO05D007585 3.2e-11 72.8 165 33.3
Manes.12G148300 Manihot esculenta HOM05D006430 ORTHO05D007585 7.0e-11 71.6 91 46.2
Lsat_1_v5_gn_4_159620 Lactuca sativa HOM05D000911 ORTHO05D007585 3.5e-10 69.3 54 64.8
Peaxi162Scf00025g02621 Petunia axillaris HOM05D006430 ORTHO05D007585 6.6e-09 65.1 165 32.1
TWI79G0409 Tripterygium wilfordii HOM05D006430 ORTHO05D007585 6.6e-09 65.1 166 31.3
Migut.L00052 Erythranthe guttata HOM05D006430 ORTHO05D007585 1.5e-08 63.9 166 31.3
unitig_37.g12838 Utricularia gibba HOM05D006430 ORTHO05D007585 1.5e-08 63.9 166 31.9
PGSC0003DMG400003975 Solanum tuberosum HOM05D006430 ORTHO05D007585 4.3e-08 62.4 166 31.3
Sopen11g001520 Solanum pennellii HOM05D006430 ORTHO05D007585 5.6e-08 62.0 166 31.3
MSTRG.3821 Avicennia marina HOM05D006430 ORTHO05D007585 7.3e-08 61.6 166 31.9
Solyc11g005550.2 Solanum lycopersicum HOM05D006430 ORTHO05D007585 7.3e-08 61.6 166 30.7
BcaC01g02704 Brassica carinata HOM05D006430 ORTHO05D007585 1.2e-07 60.8 165 30.3
A06p31510 Brassica napus HOM05D006430 ORTHO05D007585 1.2e-07 60.8 165 30.3
C03p61450 Brassica napus HOM05D006430 ORTHO05D007585 1.2e-07 60.8 165 30.3
BolC3t18404H Brassica oleracea HOM05D006430 ORTHO05D007585 1.2e-07 60.8 165 30.3
BraA06t26090Z Brassica rapa HOM05D006430 ORTHO05D007585 1.2e-07 60.8 165 30.3
BcaB01g02214 Brassica carinata HOM05D031307 ORTHO05D007585 1.6e-07 60.5 48 54.2
BcaB03g16790 Brassica carinata HOM05D031307 ORTHO05D007585 1.6e-07 60.5 48 54.2
Thhalv10004678m.g Eutrema salsugineum HOM05D006430 ORTHO05D007585 1.6e-07 60.5 165 29.1
Nitab4.5_0001582g0080 Nicotiana tabacum HOM05D006430 ORTHO05D007585 1.6e-07 60.5 166 31.3
AL8G42180 Arabidopsis lyrata HOM05D006430 ORTHO05D007585 2.1e-07 60.1 165 29.1
AT5G64730 Arabidopsis thaliana HOM05D006430 ORTHO05D007585 2.1e-07 60.1 165 29.1
BcaB02g09817 Brassica carinata HOM05D006430 ORTHO05D007585 2.1e-07 60.1 165 29.1
Carub.0008s2554 Capsella rubella HOM05D006430 ORTHO05D007585 2.1e-07 60.1 165 29.1
Oeu015836.1 Olea europaea HOM05D006430 ORTHO05D007585 2.8e-07 59.7 91 37.4
Nitab4.5_0002138g0060 Nicotiana tabacum HOM05D006430 ORTHO05D007585 3.6e-07 59.3 166 30.7
ATR0311G002 Amborella trichopoda HOM05D006430 ORTHO05D007585 1.4e-06 57.4 166 31.3
Cc07_g16870 Coffea canephora HOM05D006430 ORTHO05D007585 1.8e-06 57.0 27 92.6
Sp2g27800 Schrenkiella parvula HOM05D006430 ORTHO05D007585 3.1e-06 56.2 165 28.5
CiPaw.03G130500 Carya illinoinensis HOM05D006430 ORTHO05D007585 4.0e-06 55.8 166 28.9
Psat1g054840 Pisum sativum HOM05D004386 ORTHO05D005247 4.0e-06 55.8 112 31.2
CARHR278720 Cardamine hirsuta HOM05D006430 ORTHO05D007585 6.8e-06 55.1 165 27.9
SGA_v2.0_scaffold47G17683 Striga asiatica HOM05D006430 ORTHO05D007585 6.8e-06 55.1 91 35.2
Peaxi162Scf01159g00015 Petunia axillaris HOM05D006430 ORTHO05D007585 8.9e-06 54.7 27 88.9
Phvul.002G268300 Phaseolus vulgaris HOM05D006430 ORTHO05D007585 8.9e-06 54.7 166 30.7
VMungo0251G0154 Vigna mungo HOM05D006430 ORTHO05D007585 8.9e-06 54.7 166 30.7
GSVIVG01016788001 Vitis vinifera HOM05D006430 ORTHO05D007585 8.9e-06 54.7 91 36.3


User provided reference genes

Program Settings