Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g208360 Pisum sativum HOM05D006111 ORTHO05D007683 2.5e-215 751.9 390 100.0
Ca_14461_v3 Cicer arietinum L. HOM05D006111 ORTHO05D007683 1.0e-173 613.6 391 81.3
Medtr3g030950 Medicago truncatula HOM05D006111 ORTHO05D007683 5.7e-172 607.8 392 83.4
Psat3g069160 Pisum sativum HOM05D006111 ORTHO05D007683 3.5e-169 598.6 297 99.7
Lj3g0026579 Lotus japonicus HOM05D006111 ORTHO05D007683 2.7e-145 519.2 395 70.1
Dinv43431 Davidia involucrata HOM05D006111 ORTHO05D007683 8.1e-142 507.7 394 66.8
QL04p008312 Quercus lobata HOM05D006111 ORTHO05D007683 1.4e-141 506.9 397 68.5
Gorai.004G171600 Gossypium raimondii HOM05D006111 ORTHO05D007683 3.4e-140 502.3 402 64.7
Duzib268G0420 Durio zibethinus HOM05D006111 ORTHO05D007683 5.8e-140 501.5 391 65.5
arahy.Tifrunner.gnm1.ann1.M31XXH Arachis hypogaea HOM05D006111 ORTHO05D007683 1.3e-139 500.4 396 70.5
arahy.Tifrunner.gnm1.ann1.YZE6TL Arachis hypogaea HOM05D006111 ORTHO05D007683 1.3e-139 500.4 396 70.5
Atru.chr11.2607 Acer truncatum HOM05D006111 ORTHO05D007683 1.7e-139 500.0 394 67.3
Gohir.D08G164600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 2.9e-139 499.2 392 64.8
THA.LOC104819080 Tarenaya hassleriana HOM05D006111 ORTHO05D007683 1.9e-138 496.5 392 65.3
Ciclev10031806m.g Citrus clementina HOM05D006111 ORTHO05D007683 7.1e-138 494.6 387 64.9
Manes.10G140800 Manihot esculenta HOM05D006111 ORTHO05D007683 7.1e-138 494.6 397 67.0
TWI09G1338 Tripterygium wilfordii HOM05D006111 ORTHO05D007683 7.1e-138 494.6 396 65.2
Lalb_Chr01g0015831 Lupinus albus HOM05D006111 ORTHO05D007683 4.6e-137 491.9 394 67.0
Thecc.01G409400 Theobroma cacao HOM05D006111 ORTHO05D007683 4.6e-137 491.9 394 65.2
SalBow6G4116 Salvia bowleyana HOM05D006111 ORTHO05D007683 7.8e-137 491.1 394 64.5
Eucgr.J01211 Eucalyptus grandis HOM05D006111 ORTHO05D007683 2.3e-136 489.6 396 64.1
SalBow6G6970 Salvia bowleyana HOM05D006111 ORTHO05D007683 2.3e-136 489.6 394 64.2
Thhalv10020943m.g Eutrema salsugineum HOM05D006111 ORTHO05D007683 3.9e-136 488.8 394 65.0
Hund21484 Selenicereus undatus HOM05D006111 ORTHO05D007683 6.6e-136 488.0 400 65.2
Oeu014586.1 Olea europaea HOM05D006111 ORTHO05D007683 1.5e-135 486.9 402 64.7
Migut.N01606 Erythranthe guttata HOM05D006111 ORTHO05D007683 3.3e-135 485.7 393 63.1
CiPaw.13G006200 Carya illinoinensis HOM05D006111 ORTHO05D007683 5.6e-135 485.0 393 65.1
MD02G1308600 Malus domestica HOM05D006111 ORTHO05D007683 5.6e-135 485.0 395 64.6
Potri.009G059600 Populus trichocarpa HOM05D006111 ORTHO05D007683 7.3e-135 484.6 396 63.6
CSS0012829 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 1.2e-134 483.8 397 64.5
CSS0034733 Camellia sinensis var. sinensis HOM05D006111 ORTHO05D007683 1.2e-134 483.8 397 64.5
MD07G1013000 Malus domestica HOM05D006111 ORTHO05D007683 1.2e-134 483.8 395 64.6
Potri.009G059800 Populus trichocarpa HOM05D006111 ORTHO05D007683 1.2e-134 483.8 396 64.4
Ah.10g038770 Amaranthus hybridus HOM05D006111 ORTHO05D007683 1.6e-134 483.4 405 63.0
EL10Ac2g04342 Beta vulgaris HOM05D006111 ORTHO05D007683 1.6e-134 483.4 403 62.8
Sp3g06920 Schrenkiella parvula HOM05D006111 ORTHO05D007683 1.6e-134 483.4 394 63.5
FvH4_7g01190 Fragaria vesca HOM05D006111 ORTHO05D007683 2.1e-134 483.0 395 64.8
FAN06G2641 Fragaria x ananassa HOM05D006111 ORTHO05D007683 2.1e-134 483.0 395 64.8
Nn7g36241 Nelumbo nucifera HOM05D006111 ORTHO05D007683 3.6e-134 482.3 400 63.8
FAN10G2658 Fragaria x ananassa HOM05D006111 ORTHO05D007683 4.7e-134 481.9 395 64.6
TAR623G0061 Trochodendron aralioides HOM05D006111 ORTHO05D007683 4.7e-134 481.9 398 62.8
HanXRQChr09g0260521 Helianthus annuus HOM05D006111 ORTHO05D007683 6.2e-134 481.5 394 64.2
PGR044G0412 Punica granatum HOM05D006111 ORTHO05D007683 6.2e-134 481.5 410 62.4
FAN03G2464 Fragaria x ananassa HOM05D006111 ORTHO05D007683 8.1e-134 481.1 395 64.6
Aqoxy1G00288 Aquilegia oxysepala HOM05D006111 ORTHO05D007683 1.1e-133 480.7 403 62.0
CARHR082760 Cardamine hirsuta HOM05D006111 ORTHO05D007683 1.1e-133 480.7 393 64.6
FAN01G0043 Fragaria x ananassa HOM05D006111 ORTHO05D007683 1.1e-133 480.7 395 64.6
RcHm_v2.0_Chr1g0316521 Rosa chinensis HOM05D006111 ORTHO05D007683 1.8e-133 479.9 396 64.4
COL.COLO4_04864 Corchorus olitorius HOM05D006111 ORTHO05D007683 2.3e-133 479.6 395 66.3
AL3G19390 Arabidopsis lyrata HOM05D006111 ORTHO05D007683 5.2e-133 478.4 393 64.1
Carub.0003s0759 Capsella rubella HOM05D006111 ORTHO05D007683 5.2e-133 478.4 393 64.1
Sc10g0000130 Simmondsia chinensis HOM05D006111 ORTHO05D007683 6.8e-133 478.0 399 64.2
CsaV3_7G030960 Cucumis sativus L. HOM05D006111 ORTHO05D007683 8.9e-133 477.6 397 63.0
C03p43240 Brassica napus HOM05D006111 ORTHO05D007683 1.2e-132 477.2 390 65.1
CANSAT80G0546 Cannabis sativa HOM05D006111 ORTHO05D007683 1.5e-132 476.9 396 66.4
Lsat_1_v5_gn_4_136121 Lactuca sativa HOM05D006111 ORTHO05D007683 2.6e-132 476.1 373 67.3
Peaxi162Scf00818g00127 Petunia axillaris HOM05D006111 ORTHO05D007683 2.6e-132 476.1 415 61.2
Prupe.2G015400 Prunus persica HOM05D006111 ORTHO05D007683 3.4e-132 475.7 397 64.2
PSO339G0604 Papaver somniferum HOM05D006111 ORTHO05D007683 4.4e-132 475.3 400 63.2
ClCG09G004060 Citrullus lanatus HOM05D006111 ORTHO05D007683 5.8e-132 474.9 396 62.4
GSVIVG01032129001 Vitis vinifera HOM05D006111 ORTHO05D007683 7.6e-132 474.6 296 76.0
AT3G08010 Arabidopsis thaliana HOM05D006111 ORTHO05D007683 9.9e-132 474.2 393 63.4
PSO384G4428 Papaver somniferum HOM05D006111 ORTHO05D007683 9.9e-132 474.2 400 63.8
Phvul.005G024500 Phaseolus vulgaris HOM05D006111 ORTHO05D007683 1.3e-131 473.8 394 63.7
CAN.G666.14 Capsicum annuum HOM05D006111 ORTHO05D007683 4.9e-131 471.9 397 62.7
DCAR_015173 Daucus carota HOM05D006111 ORTHO05D007683 1.1e-130 470.7 393 61.3
Glyma.15G275900 Glycine max HOM05D006111 ORTHO05D007683 1.1e-130 470.7 395 66.1
Cc01_g06700 Coffea canephora HOM05D006111 ORTHO05D007683 1.4e-130 470.3 392 61.5
SGA_v2.0_scaffold24G10670 Striga asiatica HOM05D006111 ORTHO05D007683 5.4e-130 468.4 396 63.9
Aa31LG5G18560 Aethionema arabicum HOM05D006111 ORTHO05D007683 1.6e-129 466.8 395 62.3
MELO3C023560.2 Cucumis melo HOM05D006111 ORTHO05D007683 4.6e-129 465.3 413 60.3
Glyma.10G089700 Glycine max HOM05D006111 ORTHO05D007683 7.8e-129 464.5 393 65.1
MBI02_g05669_MAGBIO Magnolia biondii HOM05D006111 ORTHO05D007683 1.3e-128 463.8 399 61.9
Sed0027336 Sechium edule HOM05D006111 ORTHO05D007683 3.9e-128 462.2 396 61.1
PGSC0003DMG400006635 Solanum tuberosum HOM05D006111 ORTHO05D007683 3.9e-128 462.2 296 74.7
VMungo1080G1123 Vigna mungo HOM05D006111 ORTHO05D007683 5.1e-128 461.8 394 63.2
Sopen02g001570 Solanum pennellii HOM05D006111 ORTHO05D007683 1.9e-127 459.9 296 74.0
MSTRG.17026 Avicennia marina HOM05D006111 ORTHO05D007683 5.6e-127 458.4 399 60.4
Solyc02g005200.4 Solanum lycopersicum HOM05D006111 ORTHO05D007683 1.2e-126 457.2 296 73.3
vmacro21191 Vaccinium macrocarpon HOM05D006111 ORTHO05D007683 3.6e-126 455.7 473 55.6
Nitab4.5_0001001g0030 Nicotiana tabacum HOM05D006111 ORTHO05D007683 8.9e-125 451.1 399 60.9
Lj5C169G9 Lonicera japonica HOM05D006111 ORTHO05D007683 9.9e-124 447.6 279 75.6
Sabra09G0044000 Salix brachista HOM05D006111 ORTHO05D007683 2.4e-122 443.0 443 54.6
ATR0332G055 Amborella trichopoda HOM05D006111 ORTHO05D007683 9.3e-122 441.0 390 59.0
Rhsim01G0128600 Rhododendron simsii HOM05D006111 ORTHO05D007683 1.2e-121 440.7 502 53.4
unitig_749.g14328 Utricularia gibba HOM05D006111 ORTHO05D007683 3.5e-121 439.1 296 68.6
Cfa010790 Carpinus fangiana HOM05D006111 ORTHO05D007683 1.1e-117 427.6 391 59.8
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 3.4e-116 422.5 330 63.6
Cpa.g.sc125.25 Carica papaya HOM05D006111 ORTHO05D007683 1.7e-115 420.2 434 54.8
HPP92_009763 Vanilla planifolia HOM05D006111 ORTHO05D007683 1.7e-115 420.2 299 67.9
AUR62043480 Chenopodium quinoa HOM05D006111 ORTHO05D007683 4.9e-115 418.7 407 57.5
Os02g0610800 Oryza sativa ssp. japonica HOM05D006111 ORTHO05D007683 1.2e-113 414.1 296 65.2
Nitab4.5_0000139g0200 Nicotiana tabacum HOM05D006111 ORTHO05D007683 2.7e-113 412.9 401 57.4
AUR62009394 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.4e-109 399.8 407 55.3
AUR62023076 Chenopodium quinoa HOM05D006111 ORTHO05D007683 2.4e-109 399.8 407 55.3
Medtr3g030975 Medicago truncatula HOM05D006111 ORTHO05D007683 4.9e-107 392.1 213 91.5
CDE05G1285 Ceratophyllum demersum HOM05D006111 ORTHO05D007683 3.2e-106 389.4 371 56.6
Actinidia21546 Actinidia chinensis HOM05D006111 ORTHO05D007683 1.8e-96 357.1 390 54.1
Pp3c5_6760 Physcomitrium patens HOM05D006111 ORTHO05D007683 2.3e-96 356.7 293 58.7
Pp3c6_22710 Physcomitrium patens HOM05D006111 ORTHO05D007683 3.0e-96 356.3 296 59.1
BcaB03g11554 Brassica carinata HOM05D006111 ORTHO05D007683 9.6e-95 351.3 223 75.3
Mapoly0153s0005 Marchantia polymorpha HOM05D006111 ORTHO05D007683 3.1e-93 346.3 293 55.6
Haze_03183 Corylus avellana HOM05D006111 ORTHO05D007683 2.2e-91 340.1 350 56.3
TPR.G35304 Trifolium pratense HOM05D006111 ORTHO05D007683 5.0e-91 339.0 230 77.4
BolC3t16593H Brassica oleracea HOM05D006111 ORTHO05D007683 5.5e-90 335.5 213 75.1
A03p35610 Brassica napus HOM05D006111 ORTHO05D007683 9.3e-90 334.7 213 75.1
BraA03t12736Z Brassica rapa HOM05D006111 ORTHO05D007683 9.3e-90 334.7 213 75.1
AagrBONN_evm.TU.Sc2ySwM_344.1799 Anthoceros agrestis HOM05D006111 ORTHO05D007683 8.7e-88 328.2 293 53.2
Zm00001eb246820 Zea mays HOM05D006111 ORTHO05D007683 5.9e-84 315.5 209 66.0
Gohir.A08G143600 Gossypium hirsutum HOM05D006111 ORTHO05D007683 1.7e-78 297.4 269 58.0
SMO353G0296 Selaginella moellendorffii HOM05D006111 ORTHO05D007683 2.0e-76 290.4 290 46.9
Actinidia20661 Actinidia chinensis HOM05D006111 ORTHO05D007683 1.6e-73 280.8 291 55.0
Cre17.g702500 Chlamydomonas reinhardtii HOM05D006111 ORTHO05D007683 4.7e-65 252.7 285 43.9
PRCOL_00003534 Prasinoderma coloniale HOM05D006111 ORTHO05D007683 4.7e-65 252.7 297 42.4
HPP92_009753 Vanilla planifolia HOM05D006111 ORTHO05D007683 4.8e-62 242.7 177 66.7
MCO10G268 Micromonas commoda HOM05D006111 ORTHO05D007683 5.9e-60 235.7 278 43.9
Prupe.2G016000 Prunus persica HOM05D006111 ORTHO05D007683 6.8e-56 222.2 157 70.1
QL04p008446 Quercus lobata HOM05D006111 ORTHO05D007683 4.2e-50 203.0 135 74.1
CBR_g5582 Chara braunii HOM05D006111 ORTHO05D007683 4.3e-34 149.8 161 47.2
A03p35600 Brassica napus HOM05D006111 ORTHO05D007683 5.2e-32 142.9 182 48.4
SEGI_32608 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 5.2e-32 142.9 104 61.5
HanXRQChr12g0362881 Helianthus annuus HOM05D006111 ORTHO05D007683 3.2e-29 133.7 137 51.1
CBR_g5588 Chara braunii HOM05D006111 ORTHO05D007683 9.2e-29 132.1 95 64.2
Medtr8g104810 Medicago truncatula HOM05D006111 ORTHO05D007683 2.5e-26 124.0 64 87.5
TPR.G36152 Trifolium pratense HOM05D006111 ORTHO05D007683 2.1e-25 120.9 117 59.8
HPP92_009752 Vanilla planifolia HOM05D006111 ORTHO05D007683 6.2e-25 119.4 84 65.5
SEGI_00353 Sequoiadendron giganteum HOM05D006111 ORTHO05D007683 3.7e-22 110.2 87 60.9
C03p43260 Brassica napus HOM05D006111 ORTHO05D007683 1.7e-14 84.7 47 78.7
BolC3t16595H Brassica oleracea HOM05D006111 ORTHO05D007683 1.7e-14 84.7 47 78.7
Medtr5g055880 Medicago truncatula HOM05D007086 ORTHO05D008927 4.9e-06 56.6 43 60.5


User provided reference genes

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