Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g204520 Pisum sativum HOM05D002328 ORTHO05D002433 1.2e-43 179.5 91 100.0
Psat5g173120 Pisum sativum HOM05D000518 ORTHO05D023939 2.6e-35 151.8 82 93.9
Psat5g199760 Pisum sativum HOM05D000518 ORTHO05D000737 1.4e-33 146.0 82 91.5
Psat5g173200 Pisum sativum HOM05D000518 ORTHO05D000737 4.0e-28 127.9 71 93.0
Psat5g199840 Pisum sativum HOM05D000518 ORTHO05D000737 4.0e-28 127.9 71 93.0
Psat7g120120 Pisum sativum HOM05D002328 ORTHO05D002433 3.8e-26 121.3 68 89.7
Psat0s2862g0080 Pisum sativum HOM05D000840 ORTHO05D000670 6.5e-26 120.6 68 89.7
Psat0s2862g0040 Pisum sativum HOM05D002328 ORTHO05D002433 4.2e-25 117.9 68 88.2
Medtr4g087360 Medicago truncatula HOM05D002328 ORTHO05D002433 1.2e-19 99.8 71 67.6
TPR.G23547 Trifolium pratense HOM05D002328 ORTHO05D009019 1.1e-12 76.6 58 65.5
Ca_18636_v3 Cicer arietinum L. HOM05D002328 ORTHO05D002433 2.6e-11 72.0 67 61.2
Glyma.07G207500 Glycine max HOM05D002328 ORTHO05D002433 3.8e-10 68.2 68 57.4
MSTRG.22034 Avicennia marina HOM05D002328 ORTHO05D002433 3.2e-09 65.1 72 54.2
CSS0046222 Camellia sinensis var. sinensis HOM05D002328 ORTHO05D002433 3.2e-09 65.1 75 49.3
Lj6A222T13 Lonicera japonica HOM05D002328 ORTHO05D002433 4.2e-09 64.7 72 52.8
Lalb_Chr05g0218891 Lupinus albus HOM05D002328 ORTHO05D002433 5.5e-09 64.3 73 50.7
Phvul.003G296900 Phaseolus vulgaris HOM05D002328 ORTHO05D002433 1.2e-08 63.2 82 51.2
Lj6A211T19 Lonicera japonica HOM05D002328 ORTHO05D002433 2.1e-08 62.4 72 51.4
Manes.04G035100 Manihot esculenta HOM05D002328 ORTHO05D002433 2.1e-08 62.4 85 41.2
Glyma.02G137800 Glycine max HOM05D002328 ORTHO05D002433 2.7e-08 62.0 68 51.5
Lalb_Chr16g0384411 Lupinus albus HOM05D002328 ORTHO05D002433 4.7e-08 61.2 67 49.3
Ciclev10019728m.g Citrus clementina HOM05D002328 ORTHO05D002433 6.1e-08 60.8 64 50.0
Solyc03g062900.3 Solanum lycopersicum HOM05D002328 ORTHO05D002433 7.9e-08 60.5 70 51.4
Sopen03g015180 Solanum pennellii HOM05D002328 ORTHO05D002433 7.9e-08 60.5 70 51.4
Nn7g36180 Nelumbo nucifera HOM05D002328 ORTHO05D002433 1.0e-07 60.1 84 41.7
SalBow6G1888 Salvia bowleyana HOM05D002328 ORTHO05D002433 1.0e-07 60.1 72 50.0
PGSC0003DMG400008716 Solanum tuberosum HOM05D002328 ORTHO05D002433 1.4e-07 59.7 70 51.4
Dinv33207 Davidia involucrata HOM05D002328 ORTHO05D002433 1.8e-07 59.3 72 50.0
VMungo0251G0850 Vigna mungo HOM05D002328 ORTHO05D002433 2.3e-07 58.9 67 52.2
CANSAT56G1496 Cannabis sativa HOM05D002328 ORTHO05D002433 3.0e-07 58.5 72 47.2
Migut.N03064 Erythranthe guttata HOM05D002328 ORTHO05D002433 3.0e-07 58.5 75 50.7
QL10p055924 Quercus lobata HOM05D002328 ORTHO05D002433 3.9e-07 58.2 79 41.8
Atru.chr4.1423 Acer truncatum HOM05D002328 ORTHO05D002433 5.1e-07 57.8 66 48.5
DCAR_027522 Daucus carota HOM05D002328 ORTHO05D002433 6.7e-07 57.4 72 48.6
arahy.Tifrunner.gnm1.ann1.K6L3AX Arachis hypogaea HOM05D002328 ORTHO05D002433 8.8e-07 57.0 67 49.3
Peaxi162Scf00483g00067 Petunia axillaris HOM05D002328 ORTHO05D002433 8.8e-07 57.0 70 48.6
Sabra13G0106100 Salix brachista HOM05D002328 ORTHO05D002433 1.1e-06 56.6 73 45.2
Prupe.1G207400 Prunus persica HOM05D002328 ORTHO05D002433 1.5e-06 56.2 73 43.8
Nitab4.5_0000474g0080 Nicotiana tabacum HOM05D002328 ORTHO05D002433 2.0e-06 55.8 70 48.6
Eucgr.L00004 Eucalyptus grandis HOM05D002328 ORTHO05D002433 2.6e-06 55.5 66 50.0
Potri.013G127100 Populus trichocarpa HOM05D002328 ORTHO05D002433 2.6e-06 55.5 73 42.5
arahy.Tifrunner.gnm1.ann1.L505QV Arachis hypogaea HOM05D002328 ORTHO05D002433 3.3e-06 55.1 67 47.8
Cc03_g14160 Coffea canephora HOM05D002328 ORTHO05D002433 4.4e-06 54.7 72 47.2
Gohir.D10G123000 Gossypium hirsutum HOM05D002328 ORTHO05D002433 4.4e-06 54.7 82 45.1
Gorai.011G135500 Gossypium raimondii HOM05D002328 ORTHO05D002433 4.4e-06 54.7 82 45.1
Thecc.04G165400 Theobroma cacao HOM05D002328 ORTHO05D002433 4.4e-06 54.7 79 41.8
CAN.G316.13 Capsicum annuum HOM05D002328 ORTHO05D002433 5.7e-06 54.3 70 48.6
Lj4g0015409 Lotus japonicus HOM05D002328 ORTHO05D002433 5.7e-06 54.3 69 47.8
GSVIVG01038145001 Vitis vinifera HOM05D002328 ORTHO05D002433 5.7e-06 54.3 75 42.7
Nitab4.5_0000793g0010 Nicotiana tabacum HOM05D002328 ORTHO05D002433 9.7e-06 53.5 70 47.1


User provided reference genes

Program Settings