Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g203840 Pisum sativum HOM05D006104 ORTHO05D324349 7.6e-107 390.6 208 100.0
Psat4g208480 Pisum sativum HOM05D006104 ORTHO05D008303 7.6e-22 108.2 176 47.2
Ca_15100_v3 Cicer arietinum L. HOM05D006104 ORTHO05D008303 2.5e-17 93.2 156 51.9
Medtr3g063250 Medicago truncatula HOM05D006104 ORTHO05D008303 7.3e-17 91.7 159 50.3
Medtr3g063240 Medicago truncatula HOM05D006104 ORTHO05D008303 1.3e-16 90.9 159 48.4
VMungo0540G0919 Vigna mungo HOM05D006104 ORTHO05D008303 1.1e-15 87.8 159 49.1
CiPaw.03G009900 Carya illinoinensis HOM05D006104 ORTHO05D008303 2.4e-15 86.7 156 48.1
Glyma.11G202900 Glycine max HOM05D006104 ORTHO05D008303 3.1e-15 86.3 156 48.1
Glyma.18G047900 Glycine max HOM05D006104 ORTHO05D008303 3.1e-15 86.3 159 47.8
Lalb_Chr18g0053941 Lupinus albus HOM05D006104 ORTHO05D008303 3.1e-15 86.3 156 48.7
CANSAT78G2105 Cannabis sativa HOM05D006104 ORTHO05D008303 4.0e-15 85.9 154 46.1
Cfa008019 Carpinus fangiana HOM05D006104 ORTHO05D008303 4.0e-15 85.9 156 48.1
Haze_14041 Corylus avellana HOM05D006104 ORTHO05D008303 5.3e-15 85.5 156 47.4
arahy.Tifrunner.gnm1.ann1.B0P6V2 Arachis hypogaea HOM05D006104 ORTHO05D008303 6.9e-15 85.1 156 48.7
Lj6g0001971 Lotus japonicus HOM05D006104 ORTHO05D008303 6.9e-15 85.1 159 49.1
QL02p055508 Quercus lobata HOM05D006104 ORTHO05D008303 6.9e-15 85.1 156 45.5
Aqoxy3G04351 Aquilegia oxysepala HOM05D006104 ORTHO05D008303 9.0e-15 84.7 156 47.4
Lj4A249G56 Lonicera japonica HOM05D006104 ORTHO05D008303 9.0e-15 84.7 156 49.4
arahy.Tifrunner.gnm1.ann1.W9ZMNH Arachis hypogaea HOM05D006104 ORTHO05D008303 1.2e-14 84.3 156 48.1
MD09G1187600 Malus domestica HOM05D006104 ORTHO05D008303 1.5e-14 84.0 152 44.1
Phvul.006G083500 Phaseolus vulgaris HOM05D006104 ORTHO05D008303 1.5e-14 84.0 159 47.8
Nitab4.5_0008083g0020 Nicotiana tabacum HOM05D006104 ORTHO05D008303 2.0e-14 83.6 161 51.6
Peaxi162Scf00784g00028 Petunia axillaris HOM05D006104 ORTHO05D008303 2.6e-14 83.2 158 51.3
Sc09g0004650 Simmondsia chinensis HOM05D006104 ORTHO05D008303 2.6e-14 83.2 159 47.2
Cc07_g12610 Coffea canephora HOM05D006104 ORTHO05D008303 3.4e-14 82.8 156 48.1
FvH4_5g39720 Fragaria vesca HOM05D006104 ORTHO05D008303 4.5e-14 82.4 152 44.1
FAN08G3450 Fragaria x ananassa HOM05D006104 ORTHO05D008303 4.5e-14 82.4 152 44.1
FAN18G3652 Fragaria x ananassa HOM05D006104 ORTHO05D008303 4.5e-14 82.4 152 44.1
Nn4g25028 Nelumbo nucifera HOM05D006104 ORTHO05D008303 4.5e-14 82.4 156 46.8
Dinv19095 Davidia involucrata HOM05D006104 ORTHO05D008303 5.8e-14 82.0 156 46.2
CAN.G304.9 Capsicum annuum HOM05D006104 ORTHO05D008303 7.6e-14 81.6 159 47.8
DCAR_003391 Daucus carota HOM05D006104 ORTHO05D008303 7.6e-14 81.6 158 50.0
Nitab4.5_0002297g0090 Nicotiana tabacum HOM05D006104 ORTHO05D008303 7.6e-14 81.6 159 48.4
GSVIVG01033198001 Vitis vinifera HOM05D006104 ORTHO05D008303 7.6e-14 81.6 209 43.1
Actinidia32997 Actinidia chinensis HOM05D006104 ORTHO05D008303 1.3e-13 80.9 154 49.4
Rhsim10G0186700 Rhododendron simsii HOM05D006104 ORTHO05D008303 1.3e-13 80.9 156 46.8
RcHm_v2.0_Chr7g0242021 Rosa chinensis HOM05D006104 ORTHO05D008303 1.3e-13 80.9 152 43.4
PGSC0003DMG400021455 Solanum tuberosum HOM05D006104 ORTHO05D008303 1.3e-13 80.9 159 47.2
Solyc02g036470.4 Solanum lycopersicum HOM05D006104 ORTHO05D008303 1.7e-13 80.5 159 47.8
Cpa.g.sc108.21 Carica papaya HOM05D006104 ORTHO05D008303 2.2e-13 80.1 159 45.3
TAR371G0041 Trochodendron aralioides HOM05D006104 ORTHO05D008303 2.2e-13 80.1 156 45.5
AUR62037537 Chenopodium quinoa HOM05D006104 ORTHO05D008303 2.9e-13 79.7 158 44.3
Sopen02g011830 Solanum pennellii HOM05D006104 ORTHO05D008303 3.8e-13 79.3 159 46.5
MBI06_g37978_MAGBIO Magnolia biondii HOM05D006104 ORTHO05D008303 4.9e-13 79.0 153 43.1
PGR042G1876 Punica granatum HOM05D006104 ORTHO05D008303 4.9e-13 79.0 156 48.1
Gorai.008G055000 Gossypium raimondii HOM05D006104 ORTHO05D008303 6.4e-13 78.6 154 44.8
AUR62035547 Chenopodium quinoa HOM05D006104 ORTHO05D008303 8.4e-13 78.2 158 44.3
Migut.K01201 Erythranthe guttata HOM05D006104 ORTHO05D008303 8.4e-13 78.2 156 44.2
TWI74G1645 Tripterygium wilfordii HOM05D006104 ORTHO05D008303 8.4e-13 78.2 154 44.8
Atru.chr1.2189 Acer truncatum HOM05D006104 ORTHO05D008303 1.1e-12 77.8 161 49.7
Thecc.04G056600 Theobroma cacao HOM05D006104 ORTHO05D008303 1.1e-12 77.8 156 46.2
Duzib138G0961 Durio zibethinus HOM05D006104 ORTHO05D008303 1.4e-12 77.4 152 43.4
Gohir.A12G053200 Gossypium hirsutum HOM05D006104 ORTHO05D008303 1.4e-12 77.4 154 44.2
Gohir.D12G051700 Gossypium hirsutum HOM05D006104 ORTHO05D008303 1.4e-12 77.4 154 44.2
Oeu058858.1 Olea europaea HOM05D006104 ORTHO05D008303 1.9e-12 77.0 155 43.2
PSO063G5766 Papaver somniferum HOM05D006104 ORTHO05D008303 1.9e-12 77.0 154 43.5
Prupe.8G267800 Prunus persica HOM05D006104 ORTHO05D008303 1.9e-12 77.0 152 42.8
CDE04G1404 Ceratophyllum demersum HOM05D006104 ORTHO05D008303 2.4e-12 76.6 154 44.8
Eucgr.J01650 Eucalyptus grandis HOM05D006104 ORTHO05D008303 3.2e-12 76.3 159 44.0
HanXRQChr15g0486461 Helianthus annuus HOM05D006104 ORTHO05D008303 3.2e-12 76.3 159 46.5
vmacro20444 Vaccinium macrocarpon HOM05D006104 ORTHO05D008303 3.2e-12 76.3 156 46.2
MSTRG.15618 Avicennia marina HOM05D006104 ORTHO05D008303 4.2e-12 75.9 154 42.2
SGA_v2.0_scaffold199G41251 Striga asiatica HOM05D006104 ORTHO05D008303 4.2e-12 75.9 158 44.3
COL.COLO4_13439 Corchorus olitorius HOM05D006104 ORTHO05D008303 5.4e-12 75.5 159 44.7
CsaV3_5G024350 Cucumis sativus L. HOM05D006104 ORTHO05D008303 5.4e-12 75.5 159 44.7
Manes.01G125800 Manihot esculenta HOM05D006104 ORTHO05D008303 5.4e-12 75.5 154 42.9
Potri.012G145300 Populus trichocarpa HOM05D006104 ORTHO05D008303 5.4e-12 75.5 156 44.9
Hund22221 Selenicereus undatus HOM05D006104 ORTHO05D008303 5.4e-12 75.5 159 44.0
Ah.06g191390 Amaranthus hybridus HOM05D006104 ORTHO05D008303 7.1e-12 75.1 158 43.0
ECA232G1605 Erigeron canadensis HOM05D006104 ORTHO05D008303 1.2e-11 74.3 156 45.5
EL10Ac1g01448 Beta vulgaris HOM05D006104 ORTHO05D008303 2.1e-11 73.6 212 39.2
THA.LOC104820927 Tarenaya hassleriana HOM05D006104 ORTHO05D008303 2.1e-11 73.6 158 45.6
ClCG01G008400 Citrullus lanatus HOM05D006104 ORTHO05D008303 2.7e-11 73.2 159 44.0
BNapus_Darmor_BZH_scaffold_122p00170 Brassica napus HOM05D006104 ORTHO05D008303 6.0e-11 72.0 157 43.3
BraA01t04624Z Brassica rapa HOM05D006104 ORTHO05D008303 6.0e-11 72.0 157 43.3
CARHR076690 Cardamine hirsuta HOM05D006104 ORTHO05D008303 6.0e-11 72.0 154 41.6
Lsat_1_v5_gn_8_114940 Lactuca sativa HOM05D006104 ORTHO05D008303 6.0e-11 72.0 154 42.9
HPP92_022205 Vanilla planifolia HOM05D006104 ORTHO05D008303 1.3e-10 70.9 154 39.6
Aa31LG5G13170 Aethionema arabicum HOM05D006104 ORTHO05D008303 2.3e-10 70.1 156 42.3
AL3G12080 Arabidopsis lyrata HOM05D006104 ORTHO05D008303 2.3e-10 70.1 157 43.9
AT3G02690 Arabidopsis thaliana HOM05D006104 ORTHO05D008303 2.3e-10 70.1 154 40.3
BolC1t05884H Brassica oleracea HOM05D006104 ORTHO05D008303 2.3e-10 70.1 157 42.0
Ciclev10011871m.g Citrus clementina HOM05D006104 ORTHO05D008303 2.3e-10 70.1 157 43.9
ATR0124G053 Amborella trichopoda HOM05D006104 ORTHO05D008303 3.0e-10 69.7 161 44.7
Thhalv10020801m.g Eutrema salsugineum HOM05D006104 ORTHO05D008303 3.0e-10 69.7 154 40.9
Hma1.2p1_0085F.1_g043890 Hydrangea macrophylla HOM05D006104 ORTHO05D008303 5.1e-10 68.9 152 43.4
TPR.G37386 Trifolium pratense HOM05D006104 ORTHO05D008303 5.1e-10 68.9 80 63.8
Carub.0003s0179 Capsella rubella HOM05D006104 ORTHO05D008303 8.7e-10 68.2 154 39.6
Zm00001eb044830 Zea mays HOM05D006104 ORTHO05D008303 1.9e-09 67.0 158 39.9
arahy.Tifrunner.gnm1.ann1.4P08NV Arachis hypogaea HOM05D006104 ORTHO05D008303 4.3e-09 65.9 128 43.8
CSS0044834 Camellia sinensis var. sinensis HOM05D006104 ORTHO05D008303 7.4e-09 65.1 152 42.1
TPR.G14061 Trifolium pratense HOM05D006104 ORTHO05D008303 9.6e-09 64.7 117 46.2
Sp3g01720 Schrenkiella parvula HOM05D006104 ORTHO05D008303 1.3e-08 64.3 227 33.9
Sed0008277 Sechium edule HOM05D006104 ORTHO05D008303 1.3e-08 64.3 204 35.3
unitig_748.g7253 Utricularia gibba HOM05D006104 ORTHO05D008303 2.8e-08 63.2 232 37.1
SEGI_11411 Sequoiadendron giganteum HOM05D006104 ORTHO05D008303 1.1e-07 61.2 169 39.1
Psat0s2701g0160 Pisum sativum HOM05D006104 ORTHO05D000113 2.4e-07 60.1 105 42.9
AagrBONN_evm.TU.Sc2ySwM_368.1984 Anthoceros agrestis HOM05D006104 ORTHO05D008303 3.1e-07 59.7 170 42.4
MELO3C025108.2 Cucumis melo HOM05D006104 ORTHO05D008303 4.0e-07 59.3 77 59.7
EL10Ac4g08870 Beta vulgaris HOM05D006104 ORTHO05D008303 2.0e-06 57.0 158 39.2
BNapus_Darmor_BZH_scaffold_99p00200 Brassica napus HOM05D006104 ORTHO05D008303 2.6e-06 56.6 105 46.7
SalBow5G0256 Salvia bowleyana HOM05D006104 ORTHO05D008303 3.4e-06 56.2 115 40.0
Sabra12G0109100 Salix brachista HOM05D006104 ORTHO05D008303 9.9e-06 54.7 117 41.9


User provided reference genes

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