Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 4.5e-52 207.6 103 100.0
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 7.8e-52 206.8 103 99.0
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 4.3e-50 201.1 103 96.1
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 8.9e-48 193.4 103 93.2
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 1.5e-47 192.6 103 94.2
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 5.8e-47 190.7 103 92.2
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 5.8e-47 190.7 103 92.2
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 9.8e-47 189.9 103 93.2
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 1.1e-45 186.4 103 87.4
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 3.5e-44 181.4 103 85.4
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 3.9e-43 177.9 103 79.6
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 6.6e-43 177.2 105 78.1
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 1.9e-42 175.6 103 80.6
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 7.3e-42 173.7 100 79.0
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 1.6e-41 172.6 99 79.8
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 2.1e-41 172.2 102 80.4
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 2.1e-41 172.2 102 80.4
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 2.1e-41 172.2 102 80.4
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 2.8e-41 171.8 100 77.0
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 8.0e-41 170.2 99 77.8
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 8.0e-41 170.2 100 76.0
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 2.3e-40 168.7 105 76.2
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 5.2e-40 167.5 104 76.0
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 5.2e-40 167.5 99 76.8
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 6.8e-40 167.2 100 77.0
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 8.9e-40 166.8 97 80.4
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 1.5e-39 166.0 97 78.4
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 2.0e-39 165.6 97 77.3
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 4.4e-39 164.5 96 77.1
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 9.8e-39 163.3 102 76.5
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 1.7e-38 162.5 103 72.8
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 1.7e-38 162.5 103 72.8
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 1.7e-38 162.5 99 74.7
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 2.9e-38 161.8 106 72.6
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 4.9e-38 161.0 97 73.2
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 4.9e-38 161.0 99 71.7
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 6.4e-38 160.6 105 73.3
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 1.4e-37 159.5 95 78.9
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 3.2e-37 158.3 104 72.1
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 3.2e-37 158.3 102 72.5
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 3.2e-37 158.3 98 71.4
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 4.1e-37 157.9 104 71.2
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 5.4e-37 157.5 99 72.7
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 5.4e-37 157.5 98 71.4
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 5.4e-37 157.5 104 71.2
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 5.4e-37 157.5 104 71.2
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 7.0e-37 157.1 104 71.2
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 7.0e-37 157.1 100 72.0
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 9.2e-37 156.8 96 74.0
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 1.2e-36 156.4 100 72.0
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 1.2e-36 156.4 97 70.1
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 2.1e-36 155.6 102 71.6
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 2.1e-36 155.6 102 71.6
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 2.1e-36 155.6 102 71.6
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 2.1e-36 155.6 98 71.4
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.1e-36 155.6 106 67.9
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 2.1e-36 155.6 105 70.5
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 2.7e-36 155.2 100 71.0
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 2.7e-36 155.2 99 71.7
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 2.7e-36 155.2 101 72.3
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 2.7e-36 155.2 100 71.0
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 2.7e-36 155.2 98 70.4
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 2.7e-36 155.2 102 72.5
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 2.7e-36 155.2 100 71.0
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 3.5e-36 154.8 100 71.0
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 1.3e-35 152.9 81 93.8
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 1.3e-35 152.9 94 73.4
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 5.1e-35 151.0 99 70.7
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 5.1e-35 151.0 96 69.8
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 6.6e-35 150.6 137 57.7
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 8.6e-35 150.2 105 68.6
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 1.1e-34 149.8 100 69.0
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 1.1e-34 149.8 80 90.0
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 1.1e-34 149.8 102 70.6
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 1.1e-34 149.8 101 68.3
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 5.6e-34 147.5 93 74.2
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 5.6e-34 147.5 96 75.0
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 9.5e-34 146.7 101 71.3
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 9.5e-34 146.7 101 71.3
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 1.2e-33 146.4 96 69.8
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 1.6e-33 146.0 103 69.9
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 2.1e-33 145.6 102 67.6
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 2.8e-33 145.2 101 70.3
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 3.6e-33 144.8 143 53.1
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 3.6e-33 144.8 93 74.2
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 2.3e-32 142.1 95 71.6
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 2.3e-32 142.1 104 65.4
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 4.0e-32 141.4 101 68.3
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 4.0e-32 141.4 90 72.2
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 6.8e-32 140.6 80 82.5
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 1.2e-31 139.8 90 72.2
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 1.5e-31 139.4 96 66.7
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 2.9e-30 135.2 87 74.7
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 2.9e-30 135.2 86 76.7
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 1.9e-29 132.5 80 76.2
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 4.1e-29 131.3 88 72.7
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 5.4e-29 131.0 106 63.2
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 7.8e-28 127.1 91 63.7
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 1.3e-27 126.3 88 67.0
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 1.7e-27 125.9 95 68.4
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 3.9e-27 124.8 91 63.7
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 2.4e-24 115.5 95 54.7
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 1.2e-23 113.2 82 67.1
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 4.4e-23 111.3 78 67.9
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 5.8e-23 110.9 88 55.7
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 2.2e-22 109.0 87 63.2
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 8.4e-22 107.1 77 67.5
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 4.2e-21 104.8 71 71.8
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 8.7e-19 97.1 57 73.7
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 4.3e-18 94.7 54 77.8
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 2.1e-17 92.4 71 57.7
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 6.2e-17 90.9 54 72.2
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 1.6e-12 76.3 52 65.4
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 2.7e-12 75.5 53 73.6
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 5.6e-10 67.8 53 64.2
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 3.6e-09 65.1 50 62.0


User provided reference genes

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