Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 2.5e-22 107.8 53 100.0
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 1.7e-18 95.1 51 92.2
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 2.4e-17 91.3 51 88.2
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 4.2e-17 90.5 51 86.3
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 1.2e-16 89.0 51 86.3
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 2.7e-16 87.8 51 84.3
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 3.5e-16 87.4 51 84.3
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 6.0e-16 86.7 51 82.4
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 6.0e-16 86.7 51 84.3
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 1.0e-15 85.9 51 82.4
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 1.0e-15 85.9 51 84.3
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 1.3e-15 85.5 51 84.3
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 1.3e-15 85.5 51 84.3
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 1.8e-15 85.1 51 82.4
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 2.8e-13 77.8 49 71.4
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 8.1e-13 76.3 49 69.4
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 1.4e-12 75.5 48 72.9
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 1.8e-12 75.1 49 71.4
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 3.1e-12 74.3 46 71.7
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 9.0e-12 72.8 46 67.4
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 9.0e-12 72.8 46 71.7
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 9.0e-12 72.8 48 66.7
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 9.0e-12 72.8 51 62.7
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 1.5e-11 72.0 48 66.7
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 2.0e-11 71.6 50 66.0
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 2.6e-11 71.2 46 69.6
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 2.6e-11 71.2 48 66.7
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 3.4e-11 70.9 46 65.2
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 3.4e-11 70.9 48 68.8
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 3.4e-11 70.9 48 64.6
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 4.5e-11 70.5 46 67.4
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 5.8e-11 70.1 48 66.7
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 5.8e-11 70.1 48 64.6
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 5.8e-11 70.1 48 66.7
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 5.8e-11 70.1 39 84.6
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 7.6e-11 69.7 48 64.6
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 9.9e-11 69.3 48 64.6
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 9.9e-11 69.3 51 58.8
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 9.9e-11 69.3 48 66.7
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 9.9e-11 69.3 46 67.4
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 1.3e-10 68.9 45 68.9
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 1.3e-10 68.9 48 66.7
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.7e-10 68.6 48 62.5
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 1.7e-10 68.6 46 65.2
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 2.2e-10 68.2 46 63.0
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 2.2e-10 68.2 46 63.0
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 2.2e-10 68.2 46 63.0
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 2.2e-10 68.2 46 65.2
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 2.9e-10 67.8 49 61.2
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 3.8e-10 67.4 48 62.5
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 3.8e-10 67.4 46 65.2
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 3.8e-10 67.4 48 62.5
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 3.8e-10 67.4 48 62.5
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 3.8e-10 67.4 47 63.8
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 3.8e-10 67.4 46 65.2
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 3.8e-10 67.4 47 66.0
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 3.8e-10 67.4 48 60.4
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 4.9e-10 67.0 49 61.2
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 6.4e-10 66.6 48 62.5
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 6.4e-10 66.6 49 59.2
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 8.4e-10 66.2 48 62.5
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 8.4e-10 66.2 47 66.0
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 1.1e-09 65.9 49 61.2
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 1.1e-09 65.9 45 66.7
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.4e-09 65.5 48 58.3
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 1.4e-09 65.5 48 60.4
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 1.9e-09 65.1 45 66.7
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 1.9e-09 65.1 45 66.7
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.9e-09 65.1 45 66.7
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 1.9e-09 65.1 45 66.7
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 1.9e-09 65.1 48 66.7
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.9e-09 65.1 45 68.9
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.9e-09 65.1 45 68.9
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 3.2e-09 64.3 46 63.0
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 3.2e-09 64.3 45 66.7
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 4.2e-09 63.9 48 60.4
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 4.2e-09 63.9 43 69.8
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 4.2e-09 63.9 48 62.5
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 4.2e-09 63.9 48 62.5
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 4.2e-09 63.9 48 58.3
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 5.5e-09 63.5 45 64.4
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 5.5e-09 63.5 45 64.4
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 7.1e-09 63.2 46 65.2
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 9.3e-09 62.8 49 61.2
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 1.2e-08 62.4 45 62.2
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 1.2e-08 62.4 45 62.2
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 1.2e-08 62.4 48 58.3
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.2e-08 62.4 50 54.0
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.6e-08 62.0 45 64.4
Psat4g139360 Pisum sativum HOM05D007669 ORTHO05D009624 1.6e-08 62.0 39 74.4
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 1.6e-08 62.0 50 52.0
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.1e-08 61.6 50 52.0
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 2.1e-08 61.6 52 59.6
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 2.7e-08 61.2 46 60.9
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 3.5e-08 60.8 42 66.7
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 4.6e-08 60.5 44 59.1
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 6.0e-08 60.1 48 58.3
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 7.9e-08 59.7 50 52.0
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 7.9e-08 59.7 50 52.0
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 7.9e-08 59.7 46 56.5
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 1.8e-07 58.5 46 58.7
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 1.8e-07 58.5 44 56.8
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 8.7e-07 56.2 45 57.8
Psat2g006760 Pisum sativum HOM05D001260 ORTHO05D004134 1.5e-06 55.5 31 87.1
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 1.5e-06 55.5 42 57.1
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 1.9e-06 55.1 47 55.3


User provided reference genes

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