Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g191640 Pisum sativum HOM05D004726 ORTHO05D005986 5.9e-114 414.1 189 100.0
Psat1g083400 Pisum sativum HOM05D004726 ORTHO05D005986 1.3e-92 343.2 172 90.1
Ca_04399_v3 Cicer arietinum L. HOM05D004726 ORTHO05D005986 3.8e-89 331.6 172 86.6
TPR.G7511 Trifolium pratense HOM05D004726 ORTHO05D005986 2.5e-88 328.9 172 85.5
Glyma.05G072300 Glycine max HOM05D004726 ORTHO05D005986 4.7e-87 324.7 172 84.3
Medtr6g022320 Medicago truncatula HOM05D004726 ORTHO05D005986 6.1e-87 324.3 172 84.3
VMungo0464G1053 Vigna mungo HOM05D004726 ORTHO05D005986 1.0e-86 323.6 172 83.1
Glyma.19G055500 Glycine max HOM05D004726 ORTHO05D005986 1.8e-86 322.8 172 83.7
Lalb_Chr21g0317631 Lupinus albus HOM05D004726 ORTHO05D005986 1.8e-86 322.8 172 83.1
Phvul.004G058000 Phaseolus vulgaris HOM05D004726 ORTHO05D005986 1.8e-86 322.8 172 83.1
Lj2g0016129 Lotus japonicus HOM05D004726 ORTHO05D005986 4.0e-86 321.6 172 82.6
arahy.Tifrunner.gnm1.ann1.2353RE Arachis hypogaea HOM05D004726 ORTHO05D005986 6.8e-86 320.9 172 82.6
arahy.Tifrunner.gnm1.ann1.Q8ZL0R Arachis hypogaea HOM05D004726 ORTHO05D005986 6.8e-86 320.9 172 82.6
BraA03t12409Z Brassica rapa HOM05D004726 ORTHO05D005986 1.5e-85 319.7 172 81.4
Lsat_1_v5_gn_2_93500 Lactuca sativa HOM05D004726 ORTHO05D005986 2.0e-85 319.3 172 82.6
Aa31LG5G10860 Aethionema arabicum HOM05D004726 ORTHO05D005986 2.6e-85 318.9 172 81.4
HanXRQChr14g0451431 Helianthus annuus HOM05D004726 ORTHO05D005986 2.6e-85 318.9 172 82.0
PSO017G0372 Papaver somniferum HOM05D004726 ORTHO05D005986 2.6e-85 318.9 172 83.1
COL.COLO4_29260 Corchorus olitorius HOM05D004726 ORTHO05D005986 3.4e-85 318.5 175 80.6
MELO3C014786.2 Cucumis melo HOM05D004726 ORTHO05D005986 3.4e-85 318.5 172 83.1
Sp3g00330 Schrenkiella parvula HOM05D004726 ORTHO05D005986 5.7e-85 317.8 172 81.4
CsaV3_3G027570 Cucumis sativus L. HOM05D004726 ORTHO05D005986 7.5e-85 317.4 172 82.6
A03p32390 Brassica napus HOM05D004726 ORTHO05D005986 9.8e-85 317.0 172 80.8
Gohir.A09G032200 Gossypium hirsutum HOM05D004726 ORTHO05D005986 9.8e-85 317.0 172 80.8
Gohir.D09G032300 Gossypium hirsutum HOM05D004726 ORTHO05D005986 9.8e-85 317.0 172 80.8
PSO386G0103 Papaver somniferum HOM05D004726 ORTHO05D005986 9.8e-85 317.0 172 80.2
PSO478G3762 Papaver somniferum HOM05D004726 ORTHO05D005986 9.8e-85 317.0 172 82.6
QL02p073257 Quercus lobata HOM05D004726 ORTHO05D005986 1.3e-84 316.6 172 81.4
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 2.2e-84 315.8 172 82.0
Thhalv10020079m.g Eutrema salsugineum HOM05D004726 ORTHO05D005986 2.2e-84 315.8 172 80.8
Gorai.006G037200 Gossypium raimondii HOM05D004726 ORTHO05D005986 4.8e-84 314.7 172 80.2
Sabra16G0217200 Salix brachista HOM05D004726 ORTHO05D005986 4.8e-84 314.7 189 75.7
C03p39450 Brassica napus HOM05D004726 ORTHO05D005986 6.3e-84 314.3 172 80.8
BolC3t16213H Brassica oleracea HOM05D004726 ORTHO05D005986 6.3e-84 314.3 172 80.8
Nn4g22464 Nelumbo nucifera HOM05D004726 ORTHO05D005986 6.3e-84 314.3 172 80.2
Thecc.04G026000 Theobroma cacao HOM05D004726 ORTHO05D005986 8.3e-84 313.9 172 80.2
Duzib187G0212 Durio zibethinus HOM05D004726 ORTHO05D005986 1.1e-83 313.5 172 80.2
BcaC01g04537 Brassica carinata HOM05D004726 ORTHO05D005986 1.8e-83 312.8 172 80.2
Carub.0003s0033 Capsella rubella HOM05D004726 ORTHO05D005986 1.8e-83 312.8 172 79.7
Atru.BG.103.p Acer truncatum HOM05D004726 ORTHO05D005986 2.4e-83 312.4 172 80.2
Atru.chr3.2443 Acer truncatum HOM05D004726 ORTHO05D005986 2.4e-83 312.4 172 80.2
Manes.17G107900 Manihot esculenta HOM05D004726 ORTHO05D005986 2.4e-83 312.4 172 80.2
Psat0s1369g0120 Pisum sativum HOM05D004726 ORTHO05D005986 2.4e-83 312.4 172 80.2
THA.LOC104821108 Tarenaya hassleriana HOM05D004726 ORTHO05D005986 2.4e-83 312.4 172 78.5
Duzib147G0777 Durio zibethinus HOM05D004726 ORTHO05D005986 4.1e-83 311.6 172 80.2
Glyma.16G063900 Glycine max HOM05D004726 ORTHO05D005986 4.1e-83 311.6 172 80.8
Dinv33391 Davidia involucrata HOM05D004726 ORTHO05D005986 5.4e-83 311.2 172 79.7
MD09G1018400 Malus domestica HOM05D004726 ORTHO05D005986 5.4e-83 311.2 172 79.7
PSO017G1160 Papaver somniferum HOM05D004726 ORTHO05D005986 5.4e-83 311.2 172 81.4
Phvul.008G146800 Phaseolus vulgaris HOM05D004726 ORTHO05D005986 5.4e-83 311.2 172 80.2
PGR083G2241 Punica granatum HOM05D004726 ORTHO05D005986 7.0e-83 310.8 172 80.2
RcHm_v2.0_Chr2g0174041 Rosa chinensis HOM05D004726 ORTHO05D005986 7.0e-83 310.8 172 80.2
AT3G01720 Arabidopsis thaliana HOM05D004726 ORTHO05D005986 9.1e-83 310.5 172 78.5
Medtr0044s0180 Medicago truncatula HOM05D004726 ORTHO05D005986 1.2e-82 310.1 172 80.2
CANSAT64G1163 Cannabis sativa HOM05D004726 ORTHO05D005986 1.6e-82 309.7 172 79.1
Cc07_g00350 Coffea canephora HOM05D004726 ORTHO05D005986 2.0e-82 309.3 172 79.7
Potri.001G336400 Populus trichocarpa HOM05D004726 ORTHO05D005986 2.0e-82 309.3 186 75.3
Sed0019499 Sechium edule HOM05D004726 ORTHO05D005986 2.0e-82 309.3 166 82.5
Aqoxy5G03586 Aquilegia oxysepala HOM05D004726 ORTHO05D005986 2.7e-82 308.9 172 79.1
AL3G10420 Arabidopsis lyrata HOM05D004726 ORTHO05D005986 2.7e-82 308.9 172 77.9
Ca_03877_v3 Cicer arietinum L. HOM05D004726 ORTHO05D005986 2.7e-82 308.9 172 79.7
Lalb_Chr22g0360561 Lupinus albus HOM05D004726 ORTHO05D005986 2.7e-82 308.9 172 79.7
Nitab4.5_0004776g0030 Nicotiana tabacum HOM05D004726 ORTHO05D005986 2.7e-82 308.9 171 78.9
Prupe.3G298800 Prunus persica HOM05D004726 ORTHO05D005986 2.7e-82 308.9 172 79.1
Cpa.g.sc130.48 Carica papaya HOM05D004726 ORTHO05D005986 3.5e-82 308.5 175 77.1
Lju41A46T85 Lonicera japonica HOM05D004726 ORTHO05D005986 3.5e-82 308.5 172 79.1
Lj1g0014024 Lotus japonicus HOM05D004726 ORTHO05D005986 3.5e-82 308.5 183 76.0
Sed0012188 Sechium edule HOM05D004726 ORTHO05D005986 3.5e-82 308.5 172 79.7
ATR0824G115 Amborella trichopoda HOM05D004726 ORTHO05D005986 4.5e-82 308.1 172 78.5
MD17G1018800 Malus domestica HOM05D004726 ORTHO05D005986 4.5e-82 308.1 172 79.1
Nn3g16582 Nelumbo nucifera HOM05D004726 ORTHO05D005986 4.5e-82 308.1 172 79.1
FvH4_6g52410 Fragaria vesca HOM05D004726 ORTHO05D005986 5.9e-82 307.8 172 79.1
FAN05G3820 Fragaria x ananassa HOM05D004726 ORTHO05D005986 5.9e-82 307.8 172 79.1
FAN14G5799 Fragaria x ananassa HOM05D004726 ORTHO05D005986 5.9e-82 307.8 172 79.1
TWI56G1181 Tripterygium wilfordii HOM05D004726 ORTHO05D005986 5.9e-82 307.8 175 77.7
TPR.G9063 Trifolium pratense HOM05D004726 ORTHO05D005986 7.7e-82 307.4 180 77.2
GSVIVG01003968001 Vitis vinifera HOM05D004726 ORTHO05D005986 7.7e-82 307.4 172 79.1
Ciclev10014283m.g Citrus clementina HOM05D004726 ORTHO05D005986 1.0e-81 307.0 172 78.5
FAN02G2743 Fragaria x ananassa HOM05D004726 ORTHO05D005986 2.3e-81 305.8 172 78.5
Sc07g0004390 Simmondsia chinensis HOM05D004726 ORTHO05D005986 2.3e-81 305.8 172 77.3
Cfa007289 Carpinus fangiana HOM05D004726 ORTHO05D005986 2.9e-81 305.4 172 79.1
Solyc05g008260.3 Solanum lycopersicum HOM05D004726 ORTHO05D005986 3.8e-81 305.1 165 80.6
Sopen05g004100 Solanum pennellii HOM05D004726 ORTHO05D005986 3.8e-81 305.1 165 80.6
PGSC0003DMG400030549 Solanum tuberosum HOM05D004726 ORTHO05D005986 3.8e-81 305.1 165 80.6
CSS0005841 Camellia sinensis var. sinensis HOM05D004726 ORTHO05D005986 5.0e-81 304.7 172 77.9
vmacro05911 Vaccinium macrocarpon HOM05D004726 ORTHO05D005986 5.0e-81 304.7 172 77.9
vmacro05915 Vaccinium macrocarpon HOM05D004726 ORTHO05D005986 5.0e-81 304.7 172 77.9
Oeu033801.1 Olea europaea HOM05D004726 ORTHO05D005986 6.6e-81 304.3 172 76.7
TAR374G1052 Trochodendron aralioides HOM05D004726 ORTHO05D005986 6.6e-81 304.3 178 75.3
CSS0026983 Camellia sinensis var. sinensis HOM05D004726 ORTHO05D005986 8.6e-81 303.9 172 77.9
DCAR_002964 Daucus carota HOM05D004726 ORTHO05D005986 2.5e-80 302.4 172 79.1
Oeu048592.1 Olea europaea HOM05D004726 ORTHO05D005986 3.3e-80 302.0 172 77.3
CiPaw.03G049600 Carya illinoinensis HOM05D004726 ORTHO05D005986 4.2e-80 301.6 172 76.7
Haze_14803 Corylus avellana HOM05D004726 ORTHO05D005986 4.2e-80 301.6 172 77.9
HPP92_015461 Vanilla planifolia HOM05D004726 ORTHO05D005986 4.2e-80 301.6 175 74.9
Migut.G00516 Erythranthe guttata HOM05D004726 ORTHO05D005986 9.5e-80 300.4 172 76.2
Ah.11g044820 Amaranthus hybridus HOM05D004726 ORTHO05D005986 3.6e-79 298.5 172 76.7
Rhsim05G0094900 Rhododendron simsii HOM05D004726 ORTHO05D005986 3.6e-79 298.5 172 76.7
SalBow2G0243 Salvia bowleyana HOM05D004726 ORTHO05D005986 4.7e-79 298.1 172 75.0
Os01g0904500 Oryza sativa ssp. japonica HOM05D004726 ORTHO05D005986 6.1e-79 297.7 172 76.2
AUR62018238 Chenopodium quinoa HOM05D004726 ORTHO05D005986 8.0e-79 297.4 172 77.9
EL10Ac2g03214 Beta vulgaris HOM05D004726 ORTHO05D005986 1.0e-78 297.0 178 75.8
AUR62037765 Chenopodium quinoa HOM05D004726 ORTHO05D005986 5.2e-78 294.7 172 76.7
SGA_v2.0_scaffold135G34934 Striga asiatica HOM05D004726 ORTHO05D005986 5.2e-78 294.7 172 74.4
TAR622G0871 Trochodendron aralioides HOM05D004726 ORTHO05D005986 1.2e-77 293.5 172 75.0
Hund13042 Selenicereus undatus HOM05D004726 ORTHO05D005986 1.7e-76 289.7 172 72.7
CARHR075200 Cardamine hirsuta HOM05D004726 ORTHO05D005986 4.9e-76 288.1 179 70.9
Ah.12g055330 Amaranthus hybridus HOM05D004726 ORTHO05D005986 1.6e-74 283.1 172 71.5
ClCG05G012910 Citrullus lanatus HOM05D004726 ORTHO05D005986 2.7e-74 282.3 151 83.4
Oeu054664.1 Olea europaea HOM05D004726 ORTHO05D005986 2.3e-73 279.3 172 69.2
SMO117G0207 Selaginella moellendorffii HOM05D004726 ORTHO05D005986 2.9e-73 278.9 164 73.2
Oeu050441.1 Olea europaea HOM05D004726 ORTHO05D005986 2.5e-72 275.8 172 70.3
AagrBONN_evm.TU.Sc2ySwM_344.876 Anthoceros agrestis HOM05D004726 ORTHO05D005986 4.7e-71 271.6 172 70.9
Zm00001eb144300 Zea mays HOM05D004726 ORTHO05D005986 4.7e-71 271.6 148 77.7
SHI03847 Sapria himalayana HOM05D004726 ORTHO05D005986 2.3e-70 269.2 179 67.6
Eucgr.J02276 Eucalyptus grandis HOM05D004726 ORTHO05D005986 1.3e-68 263.5 143 80.4
Pp3c3_33250 Physcomitrium patens HOM05D004726 ORTHO05D005986 2.0e-66 256.1 166 66.9
Mapoly0014s0026 Marchantia polymorpha HOM05D004726 ORTHO05D005986 3.0e-65 252.3 172 65.1
Pp3c10_20040 Physcomitrium patens HOM05D004726 ORTHO05D005986 1.1e-64 250.4 166 65.1
Actinidia36156 Actinidia chinensis HOM05D004726 ORTHO05D005986 2.9e-60 235.7 185 58.9
Peaxi162Scf00205g00121 Petunia axillaris HOM05D004726 ORTHO05D005986 6.4e-60 234.6 182 58.2
Atru.chr3.1245 Acer truncatum HOM05D004726 ORTHO05D005986 1.9e-59 233.0 169 61.5
VMungo1383G2700 Vigna mungo HOM05D004726 ORTHO05D005986 2.0e-53 213.0 169 57.4
VMungo1383G3734 Vigna mungo HOM05D004726 ORTHO05D005986 4.7e-47 191.8 101 86.1
unitig_37.g12422 Utricularia gibba HOM05D004726 ORTHO05D005986 4.7e-39 165.2 111 62.2
Gohir.D07G232450 Gossypium hirsutum HOM05D004726 ORTHO05D005986 2.3e-33 146.4 133 54.9
Gorai.001G267700 Gossypium raimondii HOM05D004726 ORTHO05D005986 2.3e-33 146.4 133 54.9
PRCOL_00002880 Prasinoderma coloniale HOM05D004726 ORTHO05D005986 1.4e-30 137.1 169 40.8
Cre12.g520450 Chlamydomonas reinhardtii HOM05D004726 ORTHO05D005986 1.6e-26 123.6 168 38.1
MD04G1153000 Malus domestica HOM05D004726 ORTHO05D005986 4.6e-26 122.1 111 51.4
Zm00001eb128240 Zea mays HOM05D004726 ORTHO05D005986 7.4e-24 114.8 62 77.4
PRCOL_00003197 Prasinoderma coloniale HOM05D004726 ORTHO05D005986 1.8e-22 110.2 179 37.4
Psat6g064600 Pisum sativum HOM05D004726 ORTHO05D005986 5.8e-21 105.1 83 56.6
CAN.G1334.7 Capsicum annuum HOM05D004726 ORTHO05D005986 1.6e-18 97.1 65 61.5
MCO03G447 Micromonas commoda HOM05D004726 ORTHO05D005986 2.3e-17 93.2 162 35.8
TAR622G0354 Trochodendron aralioides HOM05D004726 ORTHO05D005986 5.1e-17 92.0 66 66.7
HanXRQChr13g0417601 Helianthus annuus HOM05D004726 ORTHO05D005986 4.8e-15 85.5 46 82.6
Psat1g035560 Pisum sativum HOM05D000639 ORTHO05D003485 7.1e-11 71.6 80 46.2
Psat2g089280 Pisum sativum HOM05D004726 ORTHO05D005986 7.1e-11 71.6 80 46.2
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 3.9e-09 65.9 38 71.1
CBR_g52139 Chara braunii HOM05D000019 ORTHO05D000002 8.7e-09 64.7 98 32.7
MD04G1152900 Malus domestica HOM05D004726 ORTHO05D005986 3.7e-07 59.3 47 48.9


User provided reference genes

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