Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g183760 Pisum sativum HOM05D015378 ORTHO05D015180 6.9e-167 590.5 286 100.0
Psat1g120640 Pisum sativum HOM05D002090 ORTHO05D015180 4.3e-60 235.7 130 87.7
Psat1g107720 Pisum sativum HOM05D015378 ORTHO05D015180 2.6e-41 173.3 101 89.1
Psat3g152840 Pisum sativum HOM05D009659 ORTHO05D015180 4.2e-39 166.0 103 79.6
Psat6g105800 Pisum sativum HOM05D002090 ORTHO05D001923 2.5e-31 140.2 76 82.9
Psat2g038760 Pisum sativum HOM05D015378 ORTHO05D015180 1.1e-26 124.8 146 52.7
Psat1g078840 Pisum sativum HOM05D062135 ORTHO05D015180 7.7e-25 118.6 90 63.3
Psat1g078880 Pisum sativum HOM05D002090 ORTHO05D001923 1.9e-23 114.0 71 70.4
Psat1g089120 Pisum sativum HOM05D015378 ORTHO05D015180 2.5e-23 113.6 86 68.6
Medtr6g464080 Medicago truncatula HOM05D002090 ORTHO05D001923 2.1e-22 110.5 247 33.2
Psat4g071560 Pisum sativum HOM05D015378 ORTHO05D015180 5.2e-21 105.9 105 61.0
Lj3g0021994 Lotus japonicus HOM05D002090 ORTHO05D001923 3.7e-19 99.8 331 24.8
Lalb_Chr02g0157091 Lupinus albus HOM05D002090 ORTHO05D001923 4.1e-18 96.3 121 38.0
TPR.G26860 Trifolium pratense HOM05D002090 ORTHO05D001923 1.1e-15 88.2 90 47.8
Psat1g003680 Pisum sativum HOM05D002090 ORTHO05D001923 1.5e-15 87.8 263 23.6
Psat4g071480 Pisum sativum HOM05D002090 ORTHO05D001923 1.9e-15 87.4 52 73.1
Psat0s1478g0240 Pisum sativum HOM05D015378 ORTHO05D015180 3.2e-15 86.7 68 55.9
Lalb_Chr13g0293791 Lupinus albus HOM05D002090 ORTHO05D001923 5.5e-15 85.9 95 38.9
Lalb_Chr11g0064711 Lupinus albus HOM05D002090 ORTHO05D001923 1.2e-14 84.7 100 41.0
Medtr2g060880 Medicago truncatula HOM05D002090 ORTHO05D001923 1.2e-14 84.7 120 39.2
Lalb_Chr25g0280991 Lupinus albus HOM05D002090 ORTHO05D001923 2.8e-14 83.6 120 35.0
TPR.G27142 Trifolium pratense HOM05D002090 ORTHO05D001923 4.7e-14 82.8 95 40.0
Medtr8g469790 Medicago truncatula HOM05D000014 ORTHO05D000016 6.1e-14 82.4 101 38.6
Lalb_Chr05g0225681 Lupinus albus HOM05D002090 ORTHO05D001923 8.0e-14 82.0 124 33.9
Psat1g020520 Pisum sativum HOM05D012348 ORTHO05D012889 4.0e-13 79.7 92 41.3
Glyma.04G181700 Glycine max HOM05D002090 ORTHO05D001923 6.8e-13 79.0 212 24.5
VMungo0540G0980 Vigna mungo HOM05D002090 ORTHO05D001923 8.8e-13 78.6 159 33.3
Medtr3g082920 Medicago truncatula HOM05D000168 ORTHO05D048861 1.2e-12 78.2 92 40.2
Psat6g105760 Pisum sativum HOM05D015378 ORTHO05D015180 1.2e-12 78.2 49 87.8
TPR.G15265 Trifolium pratense HOM05D002090 ORTHO05D001923 2.0e-12 77.4 70 50.0
Psat0s1478g0200 Pisum sativum HOM05D002090 ORTHO05D001923 2.6e-12 77.0 78 43.6
Lj4g0014236 Lotus japonicus HOM05D002090 ORTHO05D020767 5.7e-12 75.9 179 30.7
Glyma.08G253400 Glycine max HOM05D002090 ORTHO05D001923 7.5e-12 75.5 211 23.2
Glyma.13G029300 Glycine max HOM05D002090 ORTHO05D001923 7.5e-12 75.5 199 23.6
Glyma.06G126350 Glycine max HOM05D002090 ORTHO05D001923 9.8e-12 75.1 118 32.2
Psat4g042560 Pisum sativum HOM05D002090 ORTHO05D001923 9.8e-12 75.1 68 47.1
Psat5g061840 Pisum sativum HOM05D002090 ORTHO05D001923 9.8e-12 75.1 68 44.1
Glyma.11G178600 Glycine max HOM05D002090 ORTHO05D001923 1.3e-11 74.7 212 22.6
Glyma.03G121900 Glycine max HOM05D002090 ORTHO05D001923 1.7e-11 74.3 220 24.1
Psat0s892g0080 Pisum sativum HOM05D015378 ORTHO05D323122 1.7e-11 74.3 118 39.8
Psat1g115320 Pisum sativum HOM05D002090 ORTHO05D001923 1.7e-11 74.3 112 38.4
TPR.G626 Trifolium pratense HOM05D002090 ORTHO05D001923 2.2e-11 73.9 218 24.8
Glyma.05G084800 Glycine max HOM05D002090 ORTHO05D001923 2.8e-11 73.6 114 30.7
TPR.G37532 Trifolium pratense HOM05D002090 ORTHO05D001923 4.9e-11 72.8 250 25.2
Psat2g094120 Pisum sativum HOM05D023337 ORTHO05D000047 6.3e-11 72.4 86 48.8
TPR.G21912 Trifolium pratense HOM05D000096 ORTHO05D000045 1.1e-10 71.6 270 25.6
Psat1g093760 Pisum sativum HOM05D002090 ORTHO05D001923 1.4e-10 71.2 68 45.6
Psat5g186520 Pisum sativum HOM05D002090 ORTHO05D001923 1.4e-10 71.2 100 37.0
Glyma.02G161500 Glycine max HOM05D002090 ORTHO05D001923 1.8e-10 70.9 151 26.5
Lalb_Chr11g0072781 Lupinus albus HOM05D002090 ORTHO05D001923 2.4e-10 70.5 191 28.8
Medtr1g062890 Medicago truncatula HOM05D002090 ORTHO05D001923 3.1e-10 70.1 116 31.0
Psat5g054720 Pisum sativum HOM05D002090 ORTHO05D001923 3.1e-10 70.1 56 53.6
Psat5g067440 Pisum sativum HOM05D002090 ORTHO05D001923 4.1e-10 69.7 100 38.0
Glyma.20G065700 Glycine max HOM05D002090 ORTHO05D001923 5.4e-10 69.3 192 24.0
Lalb_Chr06g0171231 Lupinus albus HOM05D002090 ORTHO05D001923 5.4e-10 69.3 97 35.1
Psat2g105560 Pisum sativum HOM05D039230 ORTHO05D001923 5.4e-10 69.3 115 31.3
Psat2g112720 Pisum sativum HOM05D002090 ORTHO05D001923 5.4e-10 69.3 190 27.4
Glyma.20G053800 Glycine max HOM05D002090 ORTHO05D001923 9.2e-10 68.6 126 27.0
Glyma.05G078700 Glycine max HOM05D002090 ORTHO05D001923 1.2e-09 68.2 134 26.9
Glyma.09G080300 Glycine max HOM05D002090 ORTHO05D001923 1.2e-09 68.2 135 25.9
Glyma.16G116932 Glycine max HOM05D002090 ORTHO05D001923 1.2e-09 68.2 134 26.9
TPR.G2805 Trifolium pratense HOM05D002090 ORTHO05D001923 1.2e-09 68.2 174 29.3
Glyma.17G216450 Glycine max HOM05D002090 ORTHO05D001923 1.6e-09 67.8 126 27.8
Glyma.18G142200 Glycine max HOM05D002090 ORTHO05D001923 1.6e-09 67.8 208 22.6
Glyma.09G106000 Glycine max HOM05D002090 ORTHO05D001923 2.0e-09 67.4 215 24.2
Glyma.19G107800 Glycine max HOM05D002090 ORTHO05D001923 2.0e-09 67.4 153 24.8
Psat7g184560 Pisum sativum HOM05D002090 ORTHO05D001923 2.0e-09 67.4 69 46.4
Glyma.02G178600 Glycine max HOM05D002090 ORTHO05D001923 2.7e-09 67.0 199 23.1
Glyma.07G223800 Glycine max HOM05D002090 ORTHO05D001923 2.7e-09 67.0 125 29.6
Glyma.13G028600 Glycine max HOM05D002090 ORTHO05D001923 2.7e-09 67.0 217 24.0
Glyma.09G126850 Glycine max HOM05D002090 ORTHO05D001923 3.5e-09 66.6 125 26.4
Psat1g133760 Pisum sativum HOM05D015378 ORTHO05D015180 3.5e-09 66.6 64 64.1
Glyma.15G235800 Glycine max HOM05D002090 ORTHO05D001923 1.3e-08 64.7 126 27.0
Glyma.07G214000 Glycine max HOM05D002090 ORTHO05D001923 2.9e-08 63.5 132 24.2
Psat1g188080 Pisum sativum HOM05D002090 ORTHO05D001923 2.9e-08 63.5 88 40.9
Glyma.03G083300 Glycine max HOM05D002090 ORTHO05D001923 3.8e-08 63.2 214 23.8
Glyma.16G086900 Glycine max HOM05D021961 ORTHO05D014779 5.0e-08 62.8 183 27.3
Glyma.20G069000 Glycine max HOM05D017635 ORTHO05D014779 6.6e-08 62.4 136 24.3
TPR.G15924 Trifolium pratense HOM05D000096 ORTHO05D000045 1.5e-07 61.2 116 28.4
Medtr4g085760 Medicago truncatula HOM05D002090 ORTHO05D001923 2.5e-07 60.5 220 23.2
Medtr5g041170 Medicago truncatula HOM05D002090 ORTHO05D001923 2.5e-07 60.5 181 25.4
Medtr5g004860 Medicago truncatula HOM05D002090 ORTHO05D001923 3.3e-07 60.1 185 28.1
TPR.G39328 Trifolium pratense HOM05D002090 ORTHO05D001923 3.3e-07 60.1 96 33.3
Medtr0003s0290 Medicago truncatula HOM05D002090 ORTHO05D001923 4.3e-07 59.7 170 28.2
Medtr2g450060 Medicago truncatula HOM05D002090 ORTHO05D001923 4.3e-07 59.7 205 25.9
TPR.G8108 Trifolium pratense HOM05D000096 ORTHO05D000045 7.3e-07 58.9 173 27.7
TPR.G39946 Trifolium pratense HOM05D002090 ORTHO05D001923 9.5e-07 58.5 87 33.3
TPR.G150 Trifolium pratense HOM05D002090 ORTHO05D026072 1.6e-06 57.8 64 34.4
Glyma.09G101800 Glycine max HOM05D002090 ORTHO05D001923 2.8e-06 57.0 87 28.7
TPR.G34836 Trifolium pratense HOM05D000096 ORTHO05D000045 2.8e-06 57.0 193 26.9
TPR.G24285 Trifolium pratense HOM05D052103 ORTHO05D026072 4.7e-06 56.2 101 28.7


User provided reference genes

Program Settings