Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 5.7e-187 657.5 355 100.0
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 6.5e-106 388.3 261 82.0
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 1.1e-105 387.5 261 82.0
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 6.5e-98 361.7 266 76.3
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 6.1e-88 328.6 266 71.1
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 4.8e-85 318.9 292 63.7
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 1.6e-83 313.9 266 67.3
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 6.1e-80 302.0 269 65.8
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 1.3e-69 267.7 164 89.0
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 8.6e-58 228.4 253 55.7
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 7.3e-57 225.3 251 55.4
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 8.0e-56 221.9 328 46.0
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 1.0e-55 221.5 359 43.7
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 1.0e-55 221.5 236 56.8
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 5.2e-55 219.2 253 52.2
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 8.9e-55 218.4 345 44.1
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 1.7e-53 214.2 339 44.0
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 2.2e-53 213.8 358 40.5
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 3.7e-53 213.0 280 50.4
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 6.4e-53 212.2 321 44.5
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 1.4e-52 211.1 339 42.2
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 2.4e-52 210.3 319 44.2
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 7.0e-52 208.8 247 53.4
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 7.0e-52 208.8 336 42.9
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 9.2e-52 208.4 340 42.4
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 9.2e-52 208.4 332 43.4
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 2.7e-51 206.8 338 41.7
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 4.6e-51 206.1 323 46.1
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 1.3e-50 204.5 325 43.1
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 1.7e-50 204.1 247 52.6
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 1.9e-49 200.7 271 45.8
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 4.3e-49 199.5 197 54.3
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 8.1e-48 195.3 204 56.9
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 8.1e-48 195.3 274 45.3
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 8.1e-48 195.3 193 55.4
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.8e-47 194.1 274 44.9
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 3.1e-47 193.4 274 44.9
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 4.0e-47 193.0 317 41.6
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 1.2e-46 191.4 292 41.4
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 1.5e-46 191.0 337 42.7
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 4.4e-46 189.5 324 42.3
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 2.9e-45 186.8 286 43.4
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 3.7e-45 186.4 184 57.6
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 2.4e-44 183.7 361 38.0
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 3.2e-44 183.3 337 41.5
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 4.1e-44 183.0 327 41.9
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 5.4e-44 182.6 219 48.4
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 1.2e-43 181.4 184 53.8
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 2.1e-43 180.6 184 53.3
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 6.0e-43 179.1 305 39.7
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 5.1e-42 176.0 323 40.6
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 3.3e-41 173.3 234 45.7
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 2.3e-39 167.2 191 50.3
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 2.3e-39 167.2 339 36.9
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 6.8e-39 165.6 189 50.3
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 3.4e-38 163.3 182 53.3
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 4.4e-38 162.9 223 48.0
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 5.8e-38 162.5 195 48.2
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 7.6e-38 162.2 183 50.3
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 7.6e-38 162.2 223 48.0
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 7.6e-38 162.2 329 39.5
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 9.9e-38 161.8 342 37.4
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 9.9e-38 161.8 183 50.8
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 9.2e-36 155.2 183 48.6
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 1.2e-35 154.8 191 47.6
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 2.1e-35 154.1 325 36.6
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 7.8e-35 152.1 358 34.1
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 7.8e-35 152.1 361 34.3
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 1.3e-34 151.4 188 50.0
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 2.3e-34 150.6 333 36.3
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 2.3e-34 150.6 231 45.0
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 3.0e-34 150.2 227 44.9
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 3.0e-34 150.2 227 44.9
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 5.1e-34 149.4 357 34.2
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 1.9e-33 147.5 194 45.4
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 3.3e-33 146.7 329 34.7
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 3.3e-33 146.7 234 43.2
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 4.3e-33 146.4 360 35.8
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 1.2e-32 144.8 336 31.2
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 2.8e-32 143.7 252 39.3
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 3.6e-32 143.3 257 37.7
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 3.6e-32 143.3 195 45.6
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 6.2e-32 142.5 195 45.1
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 8.1e-32 142.1 215 43.7
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 1.1e-31 141.7 240 38.8
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 1.1e-31 141.7 252 40.1
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 1.8e-31 141.0 328 34.8
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 4.4e-30 136.3 277 36.5
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 4.4e-30 136.3 300 34.7
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 2.9e-29 133.7 232 41.8
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 1.6e-27 127.9 190 41.6
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 1.8e-23 114.4 165 40.6
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 3.4e-22 110.2 186 36.0
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 5.8e-22 109.4 200 35.0
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 1.4e-20 104.8 273 28.9
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 3.2e-20 103.6 75 74.7
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 4.8e-16 89.7 328 29.0
Thecc.07G008800 Theobroma cacao HOM05D007278 ORTHO05D009280 1.2e-06 58.5 51 64.7


User provided reference genes

Program Settings