Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g154920 Pisum sativum HOM05D000851 ORTHO05D003023 1.0e-38 162.9 82 100.0
Psat5g156200 Pisum sativum HOM05D000001 ORTHO05D003023 1.8e-27 125.6 73 86.3
Psat3g187960 Pisum sativum HOM05D000851 ORTHO05D003023 8.1e-20 100.1 71 70.4
TPR.G6980 Trifolium pratense HOM05D000851 ORTHO05D003023 2.4e-19 98.6 71 67.6
Medtr7g115350 Medicago truncatula HOM05D000851 ORTHO05D003023 1.0e-17 93.2 71 66.2
Lalb_Chr04g0262191 Lupinus albus HOM05D000851 ORTHO05D003023 7.9e-15 83.6 68 61.8
Ca_09433_v3 Cicer arietinum L. HOM05D000851 ORTHO05D003023 1.0e-14 83.2 71 62.0
Lj1g0008175 Lotus japonicus HOM05D000851 ORTHO05D003023 1.3e-14 82.8 71 62.0
arahy.Tifrunner.gnm1.ann1.FLY1RE Arachis hypogaea HOM05D000851 ORTHO05D003023 2.5e-13 78.6 71 59.2
arahy.Tifrunner.gnm1.ann1.DCE16H Arachis hypogaea HOM05D000851 ORTHO05D003023 3.7e-12 74.7 71 56.3
VMungo0540G0971 Vigna mungo HOM05D000851 ORTHO05D003023 5.3e-11 70.9 70 54.3
Phvul.006G103500 Phaseolus vulgaris HOM05D000851 ORTHO05D003023 1.5e-10 69.3 70 52.9
Glyma.03G248800 Glycine max HOM05D000851 ORTHO05D003023 2.6e-10 68.6 64 56.2
Glyma.19G246400 Glycine max HOM05D000851 ORTHO05D003023 1.3e-09 66.2 70 51.4
PGR142G1822 Punica granatum HOM05D000851 ORTHO05D003023 8.4e-09 63.5 67 52.2
Haze_04382 Corylus avellana HOM05D000851 ORTHO05D003023 7.1e-08 60.5 66 42.4
Cfa006392 Carpinus fangiana HOM05D000851 ORTHO05D003023 9.3e-08 60.1 58 48.3
CANSAT54G2416 Cannabis sativa HOM05D000851 ORTHO05D003023 1.2e-07 59.7 56 48.2
Eucgr.B02126 Eucalyptus grandis HOM05D000851 ORTHO05D003023 1.2e-07 59.7 69 47.8
Manes.08G136800 Manihot esculenta HOM05D000851 ORTHO05D003023 3.5e-07 58.2 56 48.2
QL03p028473 Quercus lobata HOM05D000851 ORTHO05D003023 1.0e-06 56.6 59 45.8
COL.COLO4_15401 Corchorus olitorius HOM05D000017 ORTHO05D000013 1.3e-06 56.2 45 57.8
ClCG02G016870 Citrullus lanatus HOM05D000851 ORTHO05D003023 1.8e-06 55.8 57 50.9
CiPaw.07G069700 Carya illinoinensis HOM05D000851 ORTHO05D003023 3.9e-06 54.7 68 39.7
FvH4_6g02500 Fragaria vesca HOM05D000851 ORTHO05D003023 3.9e-06 54.7 70 42.9
Atru.chr2.860 Acer truncatum HOM05D000851 ORTHO05D003023 5.1e-06 54.3 70 42.9
TWI56G0758 Tripterygium wilfordii HOM05D000851 ORTHO05D003023 6.7e-06 53.9 59 44.1
Manes.09G150400 Manihot esculenta HOM05D000851 ORTHO05D003023 8.7e-06 53.5 54 50.0


User provided reference genes

Program Settings