Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g148680 Pisum sativum HOM05D045341 ORTHO05D037366 2.3e-35 151.8 80 100.0
Psat0s3097g0120 Pisum sativum HOM05D045341 ORTHO05D037366 3.2e-21 104.8 71 80.3
Psat3g060120 Pisum sativum HOM05D000186 ORTHO05D005094 1.7e-14 82.4 55 80.0
Psat3g074560 Pisum sativum HOM05D000186 ORTHO05D037366 6.5e-14 80.5 60 71.7
Glyma.19G161500 Glycine max HOM05D000186 ORTHO05D005094 9.4e-13 76.6 53 79.2
Medtr7g096160 Medicago truncatula HOM05D000186 ORTHO05D005094 2.3e-11 72.0 47 78.7
arahy.Tifrunner.gnm1.ann1.L27P26 Arachis hypogaea HOM05D000186 ORTHO05D005094 3.0e-11 71.6 53 71.7
Glyma.03G159200 Glycine max HOM05D000186 ORTHO05D005094 4.0e-11 71.2 52 75.0
Lj1g0001856 Lotus japonicus HOM05D000186 ORTHO05D005094 2.0e-10 68.9 53 71.7
Ca_08648_v3 Cicer arietinum L. HOM05D000186 ORTHO05D005094 4.4e-10 67.8 53 69.8
TPR.G5751 Trifolium pratense HOM05D000186 ORTHO05D005094 5.7e-10 67.4 53 69.8
Phvul.001G157200 Phaseolus vulgaris HOM05D000186 ORTHO05D005094 9.1e-08 60.1 53 62.3
Lalb_Chr01g0019871 Lupinus albus HOM05D000186 ORTHO05D005094 1.2e-07 59.7 53 62.3
VMungo1383G2268 Vigna mungo HOM05D000186 ORTHO05D005094 1.6e-07 59.3 53 60.4
Phvul.007G177400 Phaseolus vulgaris HOM05D000186 ORTHO05D005094 3.5e-07 58.2 53 62.3
VMungo0720G1123 Vigna mungo HOM05D000186 ORTHO05D005094 3.5e-07 58.2 53 62.3
Glyma.10G032400 Glycine max HOM05D000186 ORTHO05D005094 4.5e-07 57.8 53 62.3
Glyma.02G141600 Glycine max HOM05D000186 ORTHO05D005094 5.9e-07 57.4 52 61.5
CANSAT35G1302 Cannabis sativa HOM05D000186 ORTHO05D005094 7.7e-07 57.0 53 58.5
Psat3g060520 Pisum sativum HOM05D000186 ORTHO05D005094 1.3e-06 56.2 41 75.6
TAR365G0332 Trochodendron aralioides HOM05D000186 ORTHO05D005094 1.3e-06 56.2 47 61.7
TAR636G0227 Trochodendron aralioides HOM05D000186 ORTHO05D005094 1.3e-06 56.2 53 60.4
Psat5g089560 Pisum sativum HOM05D006004 ORTHO05D006976 1.7e-06 55.8 47 66.0
Prupe.8G231500 Prunus persica HOM05D000186 ORTHO05D005094 1.7e-06 55.8 53 56.6
Lj5g0002763 Lotus japonicus HOM05D000186 ORTHO05D005094 3.8e-06 54.7 46 63.0
ATR0665G395 Amborella trichopoda HOM05D000186 ORTHO05D005094 5.0e-06 54.3 47 57.4
Nn1g02578 Nelumbo nucifera HOM05D000186 ORTHO05D005094 5.0e-06 54.3 53 56.6
PGR119G1824 Punica granatum HOM05D000186 ORTHO05D005094 5.0e-06 54.3 52 61.5
CiPaw.04G182500 Carya illinoinensis HOM05D000186 ORTHO05D005094 6.5e-06 53.9 53 58.5
MELO3C015774.2 Cucumis melo HOM05D000186 ORTHO05D005094 8.5e-06 53.5 53 54.7
CsaV3_7G027500 Cucumis sativus L. HOM05D000186 ORTHO05D005094 8.5e-06 53.5 53 54.7


User provided reference genes

Program Settings