Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 6.8e-229 797.0 397 100.0
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 1.6e-206 722.6 402 88.1
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 2.6e-204 715.3 402 87.3
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 5.2e-189 664.5 370 88.9
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 6.8e-189 664.1 409 81.2
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 2.1e-185 652.5 404 81.2
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 3.1e-181 638.6 405 78.0
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 1.7e-179 632.9 405 78.0
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 1.6e-177 626.3 408 77.2
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 1.3e-176 623.2 395 78.2
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 6.5e-155 551.2 392 68.4
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 1.3e-152 543.5 412 67.2
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 2.2e-150 536.2 399 66.7
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 9.0e-149 530.8 406 65.0
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 3.8e-147 525.4 406 64.0
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.4e-146 523.5 426 61.5
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 4.2e-146 521.9 378 67.7
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 5.5e-146 521.5 399 65.4
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 1.2e-145 520.4 395 65.1
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 1.6e-145 520.0 410 63.9
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 6.7e-144 514.6 393 64.9
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 1.1e-143 513.8 398 64.6
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 1.1e-143 513.8 404 62.9
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 5.7e-143 511.5 404 62.6
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 7.4e-143 511.1 391 63.7
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 9.7e-143 510.8 399 63.4
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 9.7e-143 510.8 394 64.7
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 2.8e-142 509.2 378 66.4
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 4.8e-142 508.4 407 64.1
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 4.8e-142 508.4 392 63.3
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 8.2e-142 507.7 383 63.7
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.4e-141 506.9 413 62.5
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 3.1e-141 505.8 399 64.4
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 4.1e-141 505.4 376 65.2
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 9.1e-141 504.2 378 64.6
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 4.5e-140 501.9 400 61.8
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 2.9e-139 499.2 405 61.0
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 5.0e-139 498.4 397 62.7
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 8.5e-139 497.7 414 60.1
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 1.1e-138 497.3 414 60.1
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 1.4e-138 496.9 403 62.5
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 2.5e-138 496.1 377 66.3
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 5.5e-138 495.0 401 63.6
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 9.4e-138 494.2 414 61.8
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 1.2e-137 493.8 401 62.3
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 1.6e-137 493.4 403 61.8
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 2.1e-137 493.0 399 61.4
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 6.1e-137 491.5 401 62.3
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 6.1e-137 491.5 291 81.1
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 7.9e-137 491.1 376 64.6
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 2.3e-136 489.6 412 61.9
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 2.3e-136 489.6 384 62.8
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.5e-135 486.9 396 60.9
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 2.0e-135 486.5 382 65.4
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 9.7e-135 484.2 396 60.4
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 2.8e-134 482.6 409 62.6
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 3.7e-134 482.3 401 60.1
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 1.1e-133 480.7 409 62.1
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 1.1e-133 480.7 409 62.1
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 4.1e-133 478.8 385 64.2
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 2.0e-132 476.5 410 59.5
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 2.6e-132 476.1 380 60.8
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 3.8e-131 472.2 390 59.5
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 1.9e-130 469.9 409 57.9
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 3.2e-130 469.2 370 63.5
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 7.2e-130 468.0 399 60.2
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 2.1e-129 466.5 446 57.2
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 3.0e-128 462.6 368 63.3
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 5.2e-128 461.8 404 58.4
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 5.7e-127 458.4 406 59.1
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 3.7e-126 455.7 448 54.7
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 6.3e-126 454.9 423 56.3
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 1.6e-124 450.3 393 58.5
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 7.2e-122 441.4 369 59.1
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 1.2e-121 440.7 333 63.7
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 1.0e-120 437.6 428 55.4
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 5.7e-119 431.8 372 57.3
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 7.7e-116 421.4 362 60.2
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 6.5e-115 418.3 395 54.9
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 7.2e-114 414.8 292 67.5
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 9.4e-114 414.5 398 54.5
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.6e-113 412.5 291 67.0
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 2.0e-111 406.8 377 54.9
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 9.8e-111 404.4 286 67.1
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 3.4e-103 379.4 293 61.8
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 9.8e-103 377.9 284 63.4
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 3.7e-94 349.4 284 63.7
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 3.5e-92 342.8 315 52.4
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 2.3e-88 330.1 234 67.9
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 7.1e-85 318.5 225 68.0
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 4.4e-79 299.3 391 43.0
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 4.9e-78 295.8 274 54.0
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 8.3e-78 295.0 270 58.5
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 2.3e-75 287.0 260 56.9
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 7.1e-69 265.4 186 76.3
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 2.5e-66 256.9 215 59.5
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 3.9e-59 233.0 392 36.0
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 1.4e-56 224.6 201 57.2
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 3.1e-48 196.8 158 62.0
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 2.5e-45 187.2 144 59.7
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 3.2e-45 186.8 107 86.0
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 4.3e-42 176.4 389 31.9
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.0e-38 165.2 144 58.3
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 8.7e-35 152.1 154 46.1
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.2e-29 133.7 113 62.8
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 5.9e-23 112.8 75 66.7
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 4.2e-21 106.7 82 61.0
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 9.7e-18 95.5 374 27.8
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 1.3e-17 95.1 132 38.6
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 2.2e-17 94.4 425 26.6
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 1.2e-15 88.6 74 67.6
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 5.9e-15 86.3 379 24.3
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 1.9e-13 81.3 384 25.8
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 1.6e-12 78.2 67 64.2
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 1.8e-11 74.7 112 37.5
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 6.7e-11 72.8 63 58.7
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 5.7e-10 69.7 64 45.3
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 1.8e-08 64.7 68 47.1


User provided reference genes

Program Settings