Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g096680 Pisum sativum HOM05D004124 ORTHO05D004779 2.1e-192 675.6 366 100.0
Medtr3g085190 Medicago truncatula HOM05D004124 ORTHO05D004779 1.0e-146 523.9 333 88.0
Lj6g0002227 Lotus japonicus HOM05D004124 ORTHO05D004779 1.3e-138 496.9 358 80.2
Ca_16453_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 8.9e-135 484.2 286 93.0
VMungo1383G0738 Vigna mungo HOM05D004124 ORTHO05D004779 2.6e-134 482.6 358 79.9
arahy.Tifrunner.gnm1.ann1.JS6392 Arachis hypogaea HOM05D004124 ORTHO05D004779 6.6e-130 468.0 362 74.3
Phvul.001G262500 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 5.3e-127 458.4 286 89.5
Glyma.11G251300 Glycine max HOM05D004124 ORTHO05D004779 1.3e-125 453.8 286 87.4
Glyma.18G005700 Glycine max HOM05D004124 ORTHO05D004779 2.9e-125 452.6 286 87.4
TPR.G17791 Trifolium pratense HOM05D004124 ORTHO05D004779 1.9e-124 449.9 288 89.2
CANSAT01G0376 Cannabis sativa HOM05D004124 ORTHO05D004779 1.5e-121 440.3 286 83.2
arahy.Tifrunner.gnm1.ann1.B7Q2TL Arachis hypogaea HOM05D004124 ORTHO05D004779 3.3e-121 439.1 300 82.0
GSVIVG01010495001 Vitis vinifera HOM05D004124 ORTHO05D004779 1.6e-120 436.8 286 85.7
Haze_12426 Corylus avellana HOM05D004124 ORTHO05D004779 2.8e-120 436.0 288 83.3
Potri.001G056000 Populus trichocarpa HOM05D004124 ORTHO05D004779 2.8e-120 436.0 292 81.5
RcHm_v2.0_Chr4g0430131 Rosa chinensis HOM05D004124 ORTHO05D004779 8.1e-120 434.5 286 82.5
Gorai.012G176300 Gossypium raimondii HOM05D004124 ORTHO05D004779 1.8e-119 433.3 304 78.6
FAN22G1987 Fragaria x ananassa HOM05D004124 ORTHO05D004779 2.4e-119 433.0 326 74.8
FAN12G0357 Fragaria x ananassa HOM05D004124 ORTHO05D004779 9.0e-119 431.0 317 76.0
FvH4_4g23660 Fragaria vesca HOM05D004124 ORTHO05D004779 1.2e-118 430.6 286 81.8
FAN17G0270 Fragaria x ananassa HOM05D004124 ORTHO05D004779 4.5e-118 428.7 317 74.8
Sabra01G0040400 Salix brachista HOM05D004124 ORTHO05D004779 7.6e-118 427.9 286 82.2
Cc11_g16980 Coffea canephora HOM05D004124 ORTHO05D004779 9.9e-118 427.6 325 73.8
Gohir.A04G140100 Gossypium hirsutum HOM05D004124 ORTHO05D004779 9.9e-118 427.6 286 81.1
Duzib251G0523 Durio zibethinus HOM05D004124 ORTHO05D004779 1.3e-117 427.2 286 81.8
FAN07G1336 Fragaria x ananassa HOM05D004124 ORTHO05D004779 2.2e-117 426.4 317 74.4
TWI18G0339 Tripterygium wilfordii HOM05D004124 ORTHO05D004779 2.2e-117 426.4 286 82.2
Manes.12G010400 Manihot esculenta HOM05D004124 ORTHO05D004779 8.4e-117 424.5 286 81.1
Gohir.D04G183300 Gossypium hirsutum HOM05D004124 ORTHO05D004779 1.1e-116 424.1 288 80.9
CiPaw.06G103200 Carya illinoinensis HOM05D004124 ORTHO05D004779 1.9e-116 423.3 286 82.5
MELO3C011859.2 Cucumis melo HOM05D004124 ORTHO05D004779 1.9e-116 423.3 286 81.1
CsaV3_5G030210 Cucumis sativus L. HOM05D004124 ORTHO05D004779 1.9e-116 423.3 286 81.1
Potri.003G172500 Populus trichocarpa HOM05D004124 ORTHO05D004779 1.9e-116 423.3 286 83.2
PGR102G1761 Punica granatum HOM05D004124 ORTHO05D004779 5.5e-116 421.8 286 81.1
Atru.chr11.2334 Acer truncatum HOM05D004124 ORTHO05D004779 9.3e-116 421.0 302 79.8
Dinv10949 Davidia involucrata HOM05D004124 ORTHO05D004779 9.3e-116 421.0 286 82.2
COL.COLO4_20412 Corchorus olitorius HOM05D004124 ORTHO05D004779 2.1e-115 419.9 240 81.7
Eucgr.H04636 Eucalyptus grandis HOM05D004124 ORTHO05D004779 2.1e-115 419.9 286 80.1
Gorai.005G166600 Gossypium raimondii HOM05D004124 ORTHO05D004779 1.0e-114 417.5 360 69.7
Ciclev10033913m.g Citrus clementina HOM05D004124 ORTHO05D004779 1.3e-114 417.2 329 73.3
QL03p052498 Quercus lobata HOM05D004124 ORTHO05D004779 8.7e-114 414.5 286 79.7
Lalb_Chr11g0075781 Lupinus albus HOM05D004124 ORTHO05D004779 7.4e-113 411.4 286 80.1
MD16G1120200 Malus domestica HOM05D004124 ORTHO05D004779 2.8e-112 409.5 288 80.6
Prupe.1G225000 Prunus persica HOM05D004124 ORTHO05D004779 1.1e-111 407.5 287 80.1
Gohir.A03G125700 Gossypium hirsutum HOM05D004124 ORTHO05D004779 1.5e-110 403.7 287 79.1
Gohir.D02G148500 Gossypium hirsutum HOM05D004124 ORTHO05D004779 1.5e-110 403.7 289 79.9
Duzib248G0967 Durio zibethinus HOM05D004124 ORTHO05D004779 1.7e-109 400.2 286 79.7
Nn5g26967 Nelumbo nucifera HOM05D004124 ORTHO05D004779 3.8e-109 399.1 314 72.9
TAR383G0859 Trochodendron aralioides HOM05D004124 ORTHO05D004779 3.2e-108 396.0 353 66.3
Sabra03G0126200 Salix brachista HOM05D004124 ORTHO05D004779 4.2e-108 395.6 271 80.8
Nn8g41237 Nelumbo nucifera HOM05D004124 ORTHO05D004779 1.2e-107 394.0 286 75.9
Sed0002251 Sechium edule HOM05D004124 ORTHO05D004779 2.7e-107 392.9 286 77.6
Lalb_Chr13g0294351 Lupinus albus HOM05D004124 ORTHO05D004779 7.9e-107 391.3 286 76.2
TAR626G1310 Trochodendron aralioides HOM05D004124 ORTHO05D004779 7.9e-107 391.3 286 76.2
Nitab4.5_0000861g0060 Nicotiana tabacum HOM05D004124 ORTHO05D004779 3.9e-106 389.0 318 71.1
Rhsim12G0025300 Rhododendron simsii HOM05D004124 ORTHO05D004779 3.9e-106 389.0 286 77.3
Aa31sc584G20 Aethionema arabicum HOM05D004124 ORTHO05D004779 5.7e-105 385.2 312 70.8
Lalb_Chr08g0230601 Lupinus albus HOM05D004124 ORTHO05D004779 5.7e-105 385.2 286 77.6
MBI13_g33572_MAGBIO Magnolia biondii HOM05D004124 ORTHO05D004779 1.6e-104 383.6 288 74.7
MSTRG.500 Avicennia marina HOM05D004124 ORTHO05D004779 2.1e-104 383.3 240 75.4
MSTRG.8009 Avicennia marina HOM05D004124 ORTHO05D004779 1.1e-103 380.9 298 74.5
Actinidia09646 Actinidia chinensis HOM05D004124 ORTHO05D004779 1.8e-103 380.2 290 75.2
Lalb_Chr07g0187111 Lupinus albus HOM05D004124 ORTHO05D004779 2.4e-103 379.8 288 75.3
AUR62005628 Chenopodium quinoa HOM05D004124 ORTHO05D004779 1.2e-102 377.5 291 75.3
AUR62028920 Chenopodium quinoa HOM05D004124 ORTHO05D004779 5.9e-102 375.2 291 74.9
Peaxi162Scf00128g01335 Petunia axillaris HOM05D004124 ORTHO05D004779 1.0e-101 374.4 285 75.8
EL10Ac6g13513 Beta vulgaris HOM05D004124 ORTHO05D004779 3.8e-101 372.5 289 73.7
PSO170G5699 Papaver somniferum HOM05D004124 ORTHO05D004779 1.1e-100 370.9 246 72.4
PGSC0003DMG400034304 Solanum tuberosum HOM05D004124 ORTHO05D004779 1.9e-100 370.2 286 74.1
Sopen05g010890 Solanum pennellii HOM05D004124 ORTHO05D004779 3.2e-100 369.4 286 74.1
PSO063G2768 Papaver somniferum HOM05D004124 ORTHO05D004779 4.2e-100 369.0 246 72.0
Migut.K00950 Erythranthe guttata HOM05D004124 ORTHO05D004779 5.5e-100 368.6 286 73.1
Actinidia30642 Actinidia chinensis HOM05D004124 ORTHO05D004779 1.2e-99 367.5 240 73.3
Solyc05g015500.4 Solanum lycopersicum HOM05D004124 ORTHO05D004779 1.2e-99 367.5 284 74.3
CAN.G163.7 Capsicum annuum HOM05D004124 ORTHO05D004779 7.9e-99 364.8 310 69.7
THA.LOC104807526 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 1.8e-98 363.6 288 70.1
Hund06093 Selenicereus undatus HOM05D004124 ORTHO05D004779 2.3e-98 363.2 295 74.6
Thhalv10018870m.g Eutrema salsugineum HOM05D004124 ORTHO05D004779 8.7e-98 361.3 245 71.0
THA.LOC104807133 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 1.5e-97 360.5 290 71.4
Actinidia08066 Actinidia chinensis HOM05D004124 ORTHO05D004779 2.5e-97 359.8 275 65.8
SGA_v2.0_scaffold391G50628 Striga asiatica HOM05D004124 ORTHO05D004779 3.3e-97 359.4 287 71.1
Thecc.02G206600 Theobroma cacao HOM05D004124 ORTHO05D004779 4.3e-97 359.0 211 80.6
Carub.0002s1361 Capsella rubella HOM05D004124 ORTHO05D004779 1.6e-96 357.1 243 70.0
vmacro01057 Vaccinium macrocarpon HOM05D004124 ORTHO05D004779 1.6e-96 357.1 371 60.6
Manes.13G011200 Manihot esculenta HOM05D004124 ORTHO05D004779 1.4e-95 354.0 298 68.8
Sp5g22270 Schrenkiella parvula HOM05D004124 ORTHO05D004779 1.8e-95 353.6 245 71.0
DCAR_024098 Daucus carota HOM05D004124 ORTHO05D004779 4.1e-95 352.4 287 69.0
Hund25468 Selenicereus undatus HOM05D004124 ORTHO05D004779 5.3e-95 352.1 263 68.1
AL2G25860 Arabidopsis lyrata HOM05D004124 ORTHO05D004779 6.9e-95 351.7 244 69.7
THA.LOC104825500 Tarenaya hassleriana HOM05D004124 ORTHO05D004779 1.2e-94 350.9 289 70.2
AT1G67325 Arabidopsis thaliana HOM05D004124 ORTHO05D004779 2.0e-94 350.1 244 69.7
CARHR059820 Cardamine hirsuta HOM05D004124 ORTHO05D004779 1.7e-93 347.1 241 69.7
ATR0626G238 Amborella trichopoda HOM05D004124 ORTHO05D004779 6.5e-93 345.1 290 67.9
BcaB03g15346 Brassica carinata HOM05D004124 ORTHO05D004779 3.2e-92 342.8 322 66.1
ECA233G0726 Erigeron canadensis HOM05D004124 ORTHO05D004779 1.2e-91 340.9 286 69.2
Eucgr.B03499 Eucalyptus grandis HOM05D004124 ORTHO05D004779 2.1e-91 340.1 311 66.6
ECA234G0541 Erigeron canadensis HOM05D004124 ORTHO05D004779 3.0e-90 336.3 235 67.2
Sed0008103 Sechium edule HOM05D004124 ORTHO05D004779 1.5e-89 334.0 233 69.1
Lj3A1069T45 Lonicera japonica HOM05D004124 ORTHO05D004779 2.0e-89 333.6 272 72.4
Aqoxy7G02609 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 4.4e-89 332.4 243 67.9
Lj6A827G48 Lonicera japonica HOM05D004124 ORTHO05D004779 1.7e-88 330.5 210 72.4
CiPaw.05G108900 Carya illinoinensis HOM05D004124 ORTHO05D004779 5.3e-87 325.5 243 77.8
DCAR_026459 Daucus carota HOM05D004124 ORTHO05D004779 5.3e-87 325.5 222 67.1
HanXRQChr17g0569011 Helianthus annuus HOM05D004124 ORTHO05D004779 5.3e-87 325.5 240 66.2
HanXRQChr12g0372641 Helianthus annuus HOM05D004124 ORTHO05D004779 2.6e-86 323.2 287 66.2
BolC6t38971H Brassica oleracea HOM05D004124 ORTHO05D004779 1.0e-85 321.2 324 64.2
C06p38790 Brassica napus HOM05D004124 ORTHO05D004779 1.7e-85 320.5 311 65.3
A07p32620 Brassica napus HOM05D004124 ORTHO05D004779 2.2e-85 320.1 325 63.7
BraA07t30886Z Brassica rapa HOM05D004124 ORTHO05D004779 2.2e-85 320.1 327 63.6
Duzib268G1736 Durio zibethinus HOM05D004124 ORTHO05D004779 7.2e-84 315.1 231 79.7
C06p42940 Brassica napus HOM05D004124 ORTHO05D004779 2.7e-83 313.2 344 59.9
ClCG11G013590 Citrullus lanatus HOM05D004124 ORTHO05D004779 1.4e-82 310.8 358 56.1
unitig_749.g13306 Utricularia gibba HOM05D004124 ORTHO05D004779 1.1e-79 301.2 240 63.8
HanXRQChr12g0361221 Helianthus annuus HOM05D004124 ORTHO05D004779 1.4e-79 300.8 240 63.8
A07p33920 Brassica napus HOM05D000660 ORTHO05D000766 2.4e-79 300.1 249 63.1
Lsat_1_v5_gn_4_400 Lactuca sativa HOM05D004124 ORTHO05D004779 2.4e-79 300.1 243 62.6
Sc04g0010190 Simmondsia chinensis HOM05D004124 ORTHO05D004779 5.3e-79 298.9 289 66.1
BolC6t39143H Brassica oleracea HOM05D004124 ORTHO05D004779 7.0e-79 298.5 298 65.1
BraA07t31018Z Brassica rapa HOM05D000660 ORTHO05D000766 1.2e-78 297.7 301 65.1
CSS0002767 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 6.5e-77 292.0 199 72.4
Ah.03g136110 Amaranthus hybridus HOM05D004124 ORTHO05D004779 1.1e-76 291.2 233 63.1
CSS0020706 Camellia sinensis var. sinensis HOM05D004124 ORTHO05D004779 4.2e-76 289.3 230 73.0
Zm00001eb174550 Zea mays HOM05D004124 ORTHO05D004779 6.7e-74 282.0 243 58.8
Oeu006524.1 Olea europaea HOM05D004124 ORTHO05D004779 1.4e-71 274.2 197 65.5
CDE04G3109 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 7.7e-70 268.5 240 60.0
Nitab4.5_0003900g0010 Nicotiana tabacum HOM05D004124 ORTHO05D004779 6.5e-69 265.4 230 69.6
Oeu049141.1 Olea europaea HOM05D004124 ORTHO05D004779 9.4e-68 261.5 218 60.1
Zm00001eb035500 Zea mays HOM05D004124 ORTHO05D004779 1.2e-65 254.6 243 54.7
HPP92_015269 Vanilla planifolia HOM05D004124 ORTHO05D004779 4.8e-64 249.2 200 62.5
Lsat_1_v5_gn_8_147801 Lactuca sativa HOM05D004124 ORTHO05D004779 9.1e-63 245.0 239 56.1
Os08g0521400 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 6.5e-61 238.8 245 52.2
Lsat_1_v5_gn_5_94821 Lactuca sativa HOM05D004124 ORTHO05D004779 1.2e-46 191.4 257 56.4
Cpa.g.sc43.62 Carica papaya HOM05D004124 ORTHO05D004779 2.8e-43 180.3 202 47.0
HanXRQChr08g0221261 Helianthus annuus HOM05D004124 ORTHO05D004779 5.4e-39 166.0 132 62.9
AagrBONN_evm.TU.Sc2ySwM_340.309 Anthoceros agrestis HOM05D004124 ORTHO05D004779 4.3e-36 156.4 254 39.4
SMO200G0023 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 1.4e-34 151.4 246 39.4
Pp3c4_8110 Physcomitrium patens HOM05D004124 ORTHO05D004779 4.4e-33 146.4 247 40.1
arahy.Tifrunner.gnm1.ann1.FNBZ5S Arachis hypogaea HOM05D004124 ORTHO05D004779 2.7e-30 137.1 225 40.0
Mapoly0005s0267 Marchantia polymorpha HOM05D004124 ORTHO05D004779 7.8e-30 135.6 249 36.1
CiPaw.14G021000 Carya illinoinensis HOM05D004124 ORTHO05D004779 6.6e-29 132.5 226 38.1
PGR083G0898 Punica granatum HOM05D004124 ORTHO05D004779 1.1e-28 131.7 189 47.1
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 2.5e-28 130.6 229 38.9
Glyma.18G252600 Glycine max HOM05D004124 ORTHO05D004779 1.6e-27 127.9 233 38.2
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 8.1e-27 125.6 246 34.6
Nn1g00866 Nelumbo nucifera HOM05D004124 ORTHO05D004779 1.1e-26 125.2 236 37.3
arahy.Tifrunner.gnm1.ann1.4H3LGZ Arachis hypogaea HOM05D004124 ORTHO05D004779 1.4e-26 124.8 237 37.1
Aqoxy3G02746 Aquilegia oxysepala HOM05D004124 ORTHO05D004779 1.8e-26 124.4 232 37.9
TAR375G0412 Trochodendron aralioides HOM05D004124 ORTHO05D004779 2.3e-26 124.0 236 38.6
TAR374G0532 Trochodendron aralioides HOM05D004124 ORTHO05D004779 3.1e-26 123.6 228 36.4
Phvul.008G046200 Phaseolus vulgaris HOM05D004124 ORTHO05D004779 1.2e-25 121.7 227 37.9
Lj3g0004507 Lotus japonicus HOM05D004124 ORTHO05D004779 2.6e-25 120.6 227 37.9
PSO782G3756 Papaver somniferum HOM05D004124 ORTHO05D004779 1.7e-24 117.9 233 37.3
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 2.9e-24 117.1 258 33.7
BcaNung07398 Brassica carinata HOM05D004124 ORTHO05D004779 9.2e-23 112.1 53 96.2
CDE06G1514 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 9.2e-23 112.1 215 35.8
Ca_14066_v3 Cicer arietinum L. HOM05D004124 ORTHO05D004779 1.2e-22 111.7 230 34.8
CBR_g53713 Chara braunii HOM05D004124 ORTHO05D004779 1.1e-20 105.1 250 34.4
Zm00001eb105300 Zea mays HOM05D004124 ORTHO05D004779 5.8e-17 92.8 246 32.1
CANSAT21G0875 Cannabis sativa HOM05D004124 ORTHO05D004779 9.9e-17 92.0 162 38.3
Os07g0490600 Oryza sativa ssp. japonica HOM05D004124 ORTHO05D004779 1.7e-16 91.3 252 31.0
PGR083G1960 Punica granatum HOM05D000500 ORTHO05D000367 2.2e-16 90.9 56 73.2
GSVIVG01018266001 Vitis vinifera HOM05D004124 ORTHO05D004779 3.8e-16 90.1 206 35.0
AagrBONN_evm.TU.Sc2ySwM_368.334 Anthoceros agrestis HOM05D004124 ORTHO05D004779 6.4e-16 89.4 204 33.8
Glyma.09G242400 Glycine max HOM05D004124 ORTHO05D004779 5.4e-15 86.3 194 35.6
Actinidia20714 Actinidia chinensis HOM05D004124 ORTHO05D004779 7.1e-15 85.9 46 82.6
Psat7g021520 Pisum sativum HOM05D004124 ORTHO05D004779 7.1e-15 85.9 249 27.3
QL04p030567 Quercus lobata HOM05D004124 ORTHO05D004779 1.6e-14 84.7 191 34.6
HanXRQChr12g0379451 Helianthus annuus HOM05D004124 ORTHO05D004779 3.5e-14 83.6 101 72.3
Eucgr.L03169 Eucalyptus grandis HOM05D004124 ORTHO05D004779 1.6e-11 74.7 103 41.7
PSO063G6881 Papaver somniferum HOM05D004124 ORTHO05D004779 1.4e-10 71.6 189 32.3
QL04p030562 Quercus lobata HOM05D004124 ORTHO05D000004 2.0e-09 67.8 51 56.9
Haze_02835 Corylus avellana HOM05D004124 ORTHO05D004779 4.5e-09 66.6 148 33.1
SMO181G0003 Selaginella moellendorffii HOM05D004124 ORTHO05D004779 2.9e-08 63.9 42 61.9
ATR0057G076 Amborella trichopoda HOM05D004124 ORTHO05D004779 1.1e-07 62.0 160 32.5
Zm00001eb321720 Zea mays HOM05D004124 ORTHO05D004779 1.6e-06 58.2 56 46.4


User provided reference genes

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