Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g096440 Pisum sativum HOM05D002231 ORTHO05D006103 4.9e-111 404.4 199 100.0
TPR.G17792 Trifolium pratense HOM05D002231 ORTHO05D006103 2.7e-101 372.1 201 92.0
Medtr3g085280 Medicago truncatula HOM05D002231 ORTHO05D006103 5.8e-96 354.4 207 87.4
Ca_16456_v3 Cicer arietinum L. HOM05D002231 ORTHO05D006103 4.2e-86 321.6 182 87.4
Phvul.001G262200 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 1.1e-81 307.0 199 78.9
Glyma.11G250900 Glycine max HOM05D002231 ORTHO05D006103 2.4e-81 305.8 199 79.4
Glyma.18G006100 Glycine max HOM05D002231 ORTHO05D006103 6.9e-81 304.3 199 78.9
VMungo1383G1118 Vigna mungo HOM05D002231 ORTHO05D006103 3.8e-79 298.5 199 77.9
Lj6g0006303 Lotus japonicus HOM05D002231 ORTHO05D006103 1.3e-76 290.0 203 76.4
arahy.Tifrunner.gnm1.ann1.4LX5KX Arachis hypogaea HOM05D002231 ORTHO05D006103 2.3e-76 289.3 201 74.6
arahy.Tifrunner.gnm1.ann1.A5UQ16 Arachis hypogaea HOM05D002231 ORTHO05D006103 2.3e-76 289.3 201 74.6
Lalb_Chr23g0278101 Lupinus albus HOM05D002231 ORTHO05D006103 2.1e-74 282.7 206 74.8
Cfa009373 Carpinus fangiana HOM05D002231 ORTHO05D006103 4.1e-73 278.5 206 69.4
Actinidia30646 Actinidia chinensis HOM05D002231 ORTHO05D006103 5.9e-72 274.6 210 68.6
GSVIVG01010488001 Vitis vinifera HOM05D002231 ORTHO05D006103 1.0e-71 273.9 207 69.1
Prupe.1G225400 Prunus persica HOM05D002231 ORTHO05D006103 1.1e-70 270.4 211 69.7
CiPaw.06G102900 Carya illinoinensis HOM05D002231 ORTHO05D006103 1.4e-70 270.0 211 69.7
Dinv10954 Davidia involucrata HOM05D002231 ORTHO05D006103 1.9e-70 269.6 212 67.5
Dinv17566 Davidia involucrata HOM05D002231 ORTHO05D005593 5.5e-70 268.1 209 67.0
Manes.12G011000 Manihot esculenta HOM05D002231 ORTHO05D006103 5.5e-70 268.1 218 68.3
Lalb_Chr08g0230621 Lupinus albus HOM05D002231 ORTHO05D006103 7.2e-70 267.7 210 71.0
CSS0047868 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 4.6e-69 265.0 213 67.6
CSS0048016 Camellia sinensis var. sinensis HOM05D002231 ORTHO05D006103 4.6e-69 265.0 213 67.6
CiPaw.05G109300 Carya illinoinensis HOM05D002231 ORTHO05D006103 4.6e-69 265.0 215 67.0
Thecc.02G207900 Theobroma cacao HOM05D002231 ORTHO05D006103 7.9e-69 264.2 227 65.2
CANSAT01G1083 Cannabis sativa HOM05D002231 ORTHO05D006103 1.8e-68 263.1 213 67.1
RcHm_v2.0_Chr4g0430201 Rosa chinensis HOM05D002231 ORTHO05D006103 3.9e-68 261.9 206 68.0
MD13G1119600 Malus domestica HOM05D002231 ORTHO05D006103 5.1e-68 261.5 210 67.1
MD16G1119800 Malus domestica HOM05D002231 ORTHO05D006103 5.1e-68 261.5 212 68.4
TWI36G0137 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 6.7e-68 261.2 206 68.9
Sc11g0000450 Simmondsia chinensis HOM05D002231 ORTHO05D006103 3.3e-67 258.8 225 63.1
Gohir.A01G160300 Gossypium hirsutum HOM05D002231 ORTHO05D006103 9.7e-67 257.3 215 67.4
Gorai.002G183300 Gossypium raimondii HOM05D002231 ORTHO05D006103 9.7e-67 257.3 215 67.9
Hma1.2p1_0275F.1_g110740 Hydrangea macrophylla HOM05D002231 ORTHO05D006103 1.3e-66 256.9 224 62.1
Nn3g16455 Nelumbo nucifera HOM05D002231 ORTHO05D006103 2.2e-66 256.1 212 65.6
Gohir.D01G147100 Gossypium hirsutum HOM05D002231 ORTHO05D006103 2.8e-66 255.8 215 67.4
Ciclev10032446m.g Citrus clementina HOM05D002231 ORTHO05D006103 3.7e-66 255.4 212 65.6
Lsat_1_v5_gn_4_3541 Lactuca sativa HOM05D002231 ORTHO05D006103 4.1e-65 251.9 218 63.3
Sed0020663 Sechium edule HOM05D002231 ORTHO05D006103 4.1e-65 251.9 173 74.6
AUR62028925 Chenopodium quinoa HOM05D002231 ORTHO05D006103 6.9e-65 251.1 200 66.0
Sopen04g017470 Solanum pennellii HOM05D002231 ORTHO05D006103 6.9e-65 251.1 205 67.3
MSTRG.501 Avicennia marina HOM05D002231 ORTHO05D006103 2.0e-64 249.6 214 65.0
CsaV3_5G030240 Cucumis sativus L. HOM05D002231 ORTHO05D006103 2.0e-64 249.6 166 75.3
FAN22G0585 Fragaria x ananassa HOM05D002231 ORTHO05D006103 3.4e-64 248.8 202 66.8
Cc11_g16940 Coffea canephora HOM05D002231 ORTHO05D006103 5.9e-64 248.1 149 84.6
EL10Ac6g13507 Beta vulgaris HOM05D002231 ORTHO05D006103 7.7e-64 247.7 204 65.7
FAN17G0493 Fragaria x ananassa HOM05D002231 ORTHO05D005593 7.7e-64 247.7 205 66.3
PSO017G2330 Papaver somniferum HOM05D002231 ORTHO05D006103 7.7e-64 247.7 206 65.0
SGA_v2.0_scaffold9G04675 Striga asiatica HOM05D002231 ORTHO05D006103 7.7e-64 247.7 218 63.8
Manes.13G011701 Manihot esculenta HOM05D002231 ORTHO05D006103 1.0e-63 247.3 175 75.4
Nitab4.5_0002558g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 1.3e-63 246.9 207 64.7
Sabra03G0125900 Salix brachista HOM05D002231 ORTHO05D005593 1.3e-63 246.9 210 61.4
Potri.001G056500 Populus trichocarpa HOM05D002231 ORTHO05D006103 1.7e-63 246.5 215 62.8
Aqoxy5G03366 Aquilegia oxysepala HOM05D002231 ORTHO05D006103 2.2e-63 246.1 167 75.4
Gohir.A04G139800 Gossypium hirsutum HOM05D002231 ORTHO05D006103 2.2e-63 246.1 219 62.6
Gorai.012G176000 Gossypium raimondii HOM05D002231 ORTHO05D006103 2.2e-63 246.1 218 62.8
MSTRG.8006 Avicennia marina HOM05D002231 ORTHO05D006103 2.9e-63 245.7 217 63.6
Phvul.L002246 Phaseolus vulgaris HOM05D002231 ORTHO05D006103 2.9e-63 245.7 205 65.9
THA.LOC104807538 Tarenaya hassleriana HOM05D002231 ORTHO05D006103 2.9e-63 245.7 213 59.2
Gohir.D04G183000 Gossypium hirsutum HOM05D002231 ORTHO05D006103 3.8e-63 245.4 220 62.3
Potri.003G172000 Populus trichocarpa HOM05D002231 ORTHO05D006103 3.8e-63 245.4 213 60.6
Duzib251G0325 Durio zibethinus HOM05D002231 ORTHO05D006103 1.9e-62 243.0 227 60.8
QL03p052604 Quercus lobata HOM05D002231 ORTHO05D006103 1.9e-62 243.0 261 54.8
Migut.J00960 Erythranthe guttata HOM05D002231 ORTHO05D006103 7.2e-62 241.1 148 81.8
Aa31LG7G9850 Aethionema arabicum HOM05D002231 ORTHO05D006103 9.4e-62 240.7 209 59.8
Rhsim12G0025500 Rhododendron simsii HOM05D002231 ORTHO05D006103 1.6e-61 240.0 204 65.7
Sabra01G0040900 Salix brachista HOM05D002231 ORTHO05D006103 3.6e-61 238.8 224 60.3
CDE02G1146 Ceratophyllum demersum HOM05D002231 ORTHO05D006103 4.6e-61 238.4 147 82.3
FAN07G0699 Fragaria x ananassa HOM05D002231 ORTHO05D006103 4.6e-61 238.4 224 60.7
Eucgr.B03496 Eucalyptus grandis HOM05D002231 ORTHO05D006103 6.1e-61 238.0 174 71.3
PGR102G0892 Punica granatum HOM05D002231 ORTHO05D006103 1.0e-60 237.3 131 87.8
FAN12G0590 Fragaria x ananassa HOM05D002231 ORTHO05D006103 2.3e-60 236.1 225 60.4
AL1G40790 Arabidopsis lyrata HOM05D002231 ORTHO05D006103 5.1e-60 235.0 207 61.4
Carub.0001s2592 Capsella rubella HOM05D002231 ORTHO05D006103 6.7e-60 234.6 207 61.4
Nitab4.5_0000067g0140 Nicotiana tabacum HOM05D002231 ORTHO05D006103 8.8e-60 234.2 232 58.2
Hund25467 Selenicereus undatus HOM05D002231 ORTHO05D006103 1.1e-59 233.8 209 58.9
MELO3C011862.2 Cucumis melo HOM05D002231 ORTHO05D006103 1.5e-59 233.4 166 72.3
A07p11870 Brassica napus HOM05D002231 ORTHO05D006103 4.4e-59 231.9 212 59.0
AT1G27385 Arabidopsis thaliana HOM05D002231 ORTHO05D006103 7.4e-59 231.1 208 61.1
TWI18G1086 Tripterygium wilfordii HOM05D002231 ORTHO05D006103 7.4e-59 231.1 191 65.4
CARHR026970 Cardamine hirsuta HOM05D002231 ORTHO05D006103 9.7e-59 230.7 147 75.5
Lsat_1_v5_gn_3_31041 Lactuca sativa HOM05D002231 ORTHO05D006103 1.3e-58 230.3 206 59.2
Glyma.08G104500 Glycine max HOM05D002231 ORTHO05D006103 1.7e-58 229.9 203 62.6
Sp1g23610 Schrenkiella parvula HOM05D002231 ORTHO05D006103 1.7e-58 229.9 147 75.5
ECA234G2919 Erigeron canadensis HOM05D002231 ORTHO05D006103 2.2e-58 229.6 130 86.9
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 2.8e-58 229.2 184 63.6
unitig_747.g21125 Utricularia gibba HOM05D002231 ORTHO05D006103 2.8e-58 229.2 149 77.2
ClCG11G013620 Citrullus lanatus HOM05D002231 ORTHO05D006103 1.1e-57 227.3 210 61.4
Thhalv10008813m.g Eutrema salsugineum HOM05D002231 ORTHO05D006103 1.1e-57 227.3 205 59.5
Atru.chr11.2328 Acer truncatum HOM05D002231 ORTHO05D006103 1.4e-57 226.9 198 63.1
Peaxi162Scf00518g00424 Petunia axillaris HOM05D002231 ORTHO05D006103 1.8e-57 226.5 150 78.0
C05p26090 Brassica napus HOM05D002231 ORTHO05D006103 2.4e-57 226.1 202 61.4
BraA07t28971Z Brassica rapa HOM05D002231 ORTHO05D006103 2.4e-57 226.1 147 74.1
BcaC06g35283 Brassica carinata HOM05D002231 ORTHO05D006103 3.1e-57 225.7 147 73.5
C07p17810 Brassica napus HOM05D002231 ORTHO05D006103 3.1e-57 225.7 147 73.5
BolC5t31328H Brassica oleracea HOM05D002231 ORTHO05D006103 3.1e-57 225.7 205 57.1
BolC7t42287H Brassica oleracea HOM05D002231 ORTHO05D006103 3.1e-57 225.7 147 73.5
A09p38550 Brassica napus HOM05D002231 ORTHO05D006103 4.1e-57 225.3 208 57.7
TAR629G1028 Trochodendron aralioides HOM05D002231 ORTHO05D006103 6.9e-57 224.6 188 62.8
vmacro01059 Vaccinium macrocarpon HOM05D002231 ORTHO05D006103 9.1e-57 224.2 130 84.6
BraA09t39361Z Brassica rapa HOM05D002231 ORTHO05D006103 2.6e-56 222.6 206 56.8
Solyc04g045580.4 Solanum lycopersicum HOM05D002231 ORTHO05D006103 5.9e-56 221.5 187 65.8
Lj4g0021495 Lotus japonicus HOM05D002231 ORTHO05D006103 5.0e-55 218.4 222 59.0
FvH4_4g23720 Fragaria vesca HOM05D002231 ORTHO05D006103 1.4e-54 216.9 184 64.1
Ah.02g130890 Amaranthus hybridus HOM05D002231 ORTHO05D006103 2.5e-54 216.1 203 60.6
Lj3C1069T6 Lonicera japonica HOM05D002231 ORTHO05D006103 2.7e-53 212.6 201 59.7
Duzib248G1458 Durio zibethinus HOM05D002231 ORTHO05D006103 7.9e-53 211.1 221 56.6
Os04g0386500 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 7.9e-53 211.1 135 74.8
Cpa.g.sc808.1 Carica papaya HOM05D002231 ORTHO05D006103 1.0e-52 210.7 120 87.5
SalBow1G3407 Salvia bowleyana HOM05D002231 ORTHO05D006103 8.8e-52 207.6 288 47.2
SalBow8G1223 Salvia bowleyana HOM05D002231 ORTHO05D006103 1.5e-51 206.8 148 70.3
Os02g0507400 Oryza sativa ssp. japonica HOM05D002231 ORTHO05D006103 4.4e-51 205.3 145 66.2
MBI11_g05330_MAGBIO Magnolia biondii HOM05D002231 ORTHO05D006103 5.7e-51 204.9 186 62.4
HanXRQChr12g0385441 Helianthus annuus HOM05D002231 ORTHO05D006103 1.3e-50 203.8 161 67.1
HanXRQChr06g0174651 Helianthus annuus HOM05D002231 ORTHO05D006103 8.2e-50 201.1 208 49.0
Zm00001eb421060 Zea mays HOM05D002231 ORTHO05D006103 1.4e-49 200.3 201 55.7
ECA246G2515 Erigeron canadensis HOM05D002231 ORTHO05D006103 2.4e-49 199.5 210 51.4
Haze_12423 Corylus avellana HOM05D002231 ORTHO05D006103 2.0e-48 196.4 159 62.9
BcaC05g26745 Brassica carinata HOM05D002231 ORTHO05D006103 4.5e-48 195.3 199 55.3
BcaB03g13989 Brassica carinata HOM05D002231 ORTHO05D006103 5.9e-48 194.9 128 72.7
Nn4g22308 Nelumbo nucifera HOM05D002231 ORTHO05D006103 7.7e-48 194.5 176 61.4
AUR62005623 Chenopodium quinoa HOM05D002231 ORTHO05D006103 1.3e-47 193.7 206 55.8
BcaC05g26552 Brassica carinata HOM05D002231 ORTHO05D006103 1.5e-46 190.3 187 53.5
COL.COLO4_20407 Corchorus olitorius HOM05D002231 ORTHO05D006103 2.1e-45 186.4 170 60.6
Zm00001eb085510 Zea mays HOM05D002231 ORTHO05D006103 2.0e-43 179.9 124 68.5
arahy.Tifrunner.gnm1.ann1.1IJF7J Arachis hypogaea HOM05D002231 ORTHO05D006103 4.4e-43 178.7 199 53.8
arahy.Tifrunner.gnm1.ann1.RN2E3G Arachis hypogaea HOM05D002231 ORTHO05D006103 9.7e-43 177.6 196 55.6
Oeu049136.1 Olea europaea HOM05D002231 ORTHO05D006103 1.3e-42 177.2 126 71.4
SMO246G0027 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 6.3e-42 174.9 133 63.9
Oeu029193.1 Olea europaea HOM05D002231 ORTHO05D006103 1.8e-41 173.3 166 59.6
HanXRQChr08g0207851 Helianthus annuus HOM05D002231 ORTHO05D006103 3.1e-41 172.6 118 73.7
Pp3c15_19360 Physcomitrium patens HOM05D002231 ORTHO05D006103 3.1e-41 172.6 134 67.9
DCAR_007004 Daucus carota HOM05D002231 ORTHO05D006103 5.3e-41 171.8 128 66.4
ECA233G1565 Erigeron canadensis HOM05D002231 ORTHO05D006103 5.3e-41 171.8 131 65.6
SMO364G0411 Selaginella moellendorffii HOM05D002231 ORTHO05D006103 4.5e-40 168.7 134 65.7
AagrBONN_evm.TU.Sc2ySwM_368.423 Anthoceros agrestis HOM05D002231 ORTHO05D006103 2.9e-39 166.0 130 66.2
SalBow2G1775 Salvia bowleyana HOM05D002231 ORTHO05D006103 8.5e-39 164.5 165 58.2
ATR0059G025 Amborella trichopoda HOM05D002231 ORTHO05D006103 1.1e-38 164.1 104 77.9
Pp3c9_19480 Physcomitrium patens HOM05D002231 ORTHO05D006103 1.1e-38 164.1 137 62.8
Nitab4.5_0000155g0190 Nicotiana tabacum HOM05D002231 ORTHO05D006103 3.2e-38 162.5 119 68.1
DCAR_026462 Daucus carota HOM05D002231 ORTHO05D006103 4.7e-37 158.7 193 48.7
CBR_g57027 Chara braunii HOM05D002231 ORTHO05D006103 1.4e-36 157.1 158 53.2
Nitab4.5_0004003g0010 Nicotiana tabacum HOM05D002231 ORTHO05D006103 2.3e-36 156.4 103 75.7
Lsat_1_v5_gn_4_56001 Lactuca sativa HOM05D002231 ORTHO05D006103 4.9e-26 122.1 136 50.7
PRCOL_00004939 Prasinoderma coloniale HOM05D002231 ORTHO05D006103 7.0e-25 118.2 138 44.9
TAR383G1026 Trochodendron aralioides HOM05D002231 ORTHO05D006103 4.7e-21 105.5 87 64.4
RcHm_v2.0_Chr3g0491761 Rosa chinensis HOM05D002231 ORTHO05D006103 1.4e-20 104.0 62 85.5
Cre02.g074700 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 8.3e-18 94.7 130 40.0
Cre12.g508300 Chlamydomonas reinhardtii HOM05D002231 ORTHO05D006103 9.2e-17 91.3 88 53.4
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 4.3e-14 82.4 116 36.2
CDE05G2241 Ceratophyllum demersum HOM05D001859 ORTHO05D001836 9.8e-11 71.2 40 85.0
TAR636G2964 Trochodendron aralioides HOM05D002231 ORTHO05D006103 4.6e-08 62.4 35 85.7
C02p58440 Brassica napus HOM05D001393 ORTHO05D032808 2.3e-07 60.1 39 64.1


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