Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 5.2e-229 797.3 398 100.0
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 1.9e-215 752.3 398 94.7
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 5.6e-215 750.7 399 93.0
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 4.9e-195 684.5 399 84.7
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 1.1e-194 683.3 396 84.3
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 6.0e-193 677.6 396 84.1
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 5.1e-192 674.5 395 83.8
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 2.8e-190 668.7 396 82.6
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 7.6e-188 660.6 399 81.2
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 6.4e-187 657.5 399 80.7
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 6.4e-187 657.5 399 80.7
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 2.1e-174 615.9 390 76.9
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 5.5e-170 601.3 394 73.1
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 2.1e-169 599.4 385 76.1
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 1.3e-168 596.7 390 74.4
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 1.6e-166 589.7 390 73.1
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 3.7e-166 588.6 311 95.2
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 6.9e-165 584.3 394 72.3
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 1.5e-164 583.2 391 72.9
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 2.0e-164 582.8 397 72.5
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 2.0e-164 582.8 396 72.0
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 1.7e-163 579.7 390 72.3
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 2.5e-162 575.9 394 72.3
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 2.7e-161 572.4 391 70.6
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 2.7e-161 572.4 384 73.4
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 3.5e-161 572.0 391 71.4
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 3.9e-160 568.5 390 71.5
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 8.7e-160 567.4 385 72.7
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 1.5e-159 566.6 385 73.8
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 1.9e-159 566.2 393 70.5
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 7.4e-159 564.3 385 72.2
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 7.4e-159 564.3 385 72.2
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 7.4e-159 564.3 386 73.3
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 9.7e-159 563.9 395 70.4
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 3.1e-157 558.9 390 70.0
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 2.6e-156 555.8 397 68.5
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 3.4e-156 555.4 391 69.8
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 4.5e-156 555.1 459 63.0
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 5.9e-156 554.7 394 70.8
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 2.2e-155 552.7 391 69.8
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 3.8e-155 552.0 441 64.9
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 8.5e-155 550.8 397 68.8
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 4.6e-153 545.0 386 71.5
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 2.3e-152 542.7 390 67.7
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 1.1e-151 540.4 394 66.2
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 6.3e-150 534.6 491 58.5
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 8.2e-150 534.3 397 64.7
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 1.8e-149 533.1 397 64.2
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 9.1e-149 530.8 395 64.3
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 2.6e-148 529.3 393 64.4
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 2.6e-148 529.3 391 67.0
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 1.3e-147 526.9 385 66.5
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 2.9e-147 525.8 407 63.4
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 1.9e-146 523.1 390 63.3
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 1.9e-146 523.1 380 68.7
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 1.6e-145 520.0 392 63.5
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 3.6e-145 518.8 394 66.5
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 4.7e-145 518.5 386 65.3
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 1.8e-144 516.5 397 62.2
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 8.8e-144 514.2 372 68.0
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 2.6e-143 512.7 388 63.4
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 2.6e-143 512.7 391 63.7
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 5.7e-143 511.5 392 62.5
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 7.4e-143 511.1 392 62.5
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 1.3e-142 510.4 393 62.1
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 1.3e-142 510.4 392 62.2
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 1.3e-142 510.4 393 62.1
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 1.3e-142 510.4 386 64.2
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 2.2e-142 509.6 383 64.2
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 3.7e-142 508.8 385 65.5
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 6.3e-142 508.1 346 73.4
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 1.4e-141 506.9 388 62.9
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 5.3e-141 505.0 391 62.1
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 9.1e-141 504.2 392 64.0
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 4.5e-140 501.9 391 61.4
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 5.9e-140 501.5 385 63.4
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 6.5e-139 498.0 396 61.1
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 1.1e-138 497.3 391 59.6
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 7.2e-138 494.6 350 69.1
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 4.7e-137 491.9 390 60.0
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 4.7e-137 491.9 382 62.0
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 6.1e-137 491.5 391 60.4
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 1.0e-136 490.7 390 59.7
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 1.0e-136 490.7 390 59.7
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 1.4e-136 490.3 390 59.5
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 5.2e-136 488.4 400 58.5
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 1.3e-131 473.8 358 62.8
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 3.8e-131 472.2 330 70.9
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 3.6e-129 465.7 396 57.8
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 3.0e-128 462.6 386 62.7
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 8.8e-128 461.1 386 62.4
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 6.5e-123 444.9 325 68.6
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 2.3e-120 436.4 335 64.2
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 1.5e-114 417.2 310 64.8
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.0e-112 411.0 389 54.5
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 1.6e-108 397.1 330 60.6
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 1.7e-102 377.1 270 66.7
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 2.9e-102 376.3 319 57.7
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 1.9e-101 373.6 344 54.4
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 2.7e-92 343.2 255 65.5
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 2.7e-92 343.2 255 65.5
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 9.6e-74 281.6 392 43.1
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 6.4e-70 268.9 393 39.2
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 1.3e-67 261.2 215 61.4
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 3.6e-65 253.1 204 62.7
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 3.1e-64 250.0 183 67.8
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 4.3e-42 176.4 114 72.8
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 1.5e-26 124.8 93 61.3
Glyma.16G096400 Glycine max HOM05D001723 ORTHO05D001706 6.3e-09 66.2 38 84.2


User provided reference genes

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