Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 6.9e-79 297.4 164 100.0
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 5.2e-66 254.6 164 84.1
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 3.1e-63 245.4 163 82.2
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 5.9e-54 214.5 156 77.6
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 1.5e-49 199.9 146 74.7
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 1.5e-49 199.9 162 69.8
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 7.5e-49 197.6 162 68.5
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 1.8e-47 193.0 146 71.2
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 7.8e-46 187.6 139 74.8
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 1.0e-45 187.2 141 75.2
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 2.3e-45 186.0 149 65.8
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 5.0e-45 184.9 162 63.0
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 5.0e-45 184.9 162 63.0
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 5.0e-45 184.9 149 70.5
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 3.3e-44 182.2 145 68.3
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 3.3e-44 182.2 134 72.4
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 5.6e-44 181.4 146 71.2
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 2.1e-43 179.5 149 65.8
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 2.1e-43 179.5 145 67.6
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 4.7e-43 178.3 132 73.5
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 1.4e-42 176.8 149 67.1
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 4.0e-42 175.3 139 67.6
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 5.2e-42 174.9 144 66.0
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 6.8e-42 174.5 149 64.4
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 6.8e-42 174.5 149 66.4
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 8.9e-42 174.1 140 67.1
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 8.9e-42 174.1 140 67.1
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 1.5e-41 173.3 145 65.5
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 2.0e-41 172.9 140 66.4
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 2.9e-40 169.1 140 64.3
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 2.9e-40 169.1 157 61.1
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 3.7e-40 168.7 134 67.2
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 4.9e-40 168.3 144 66.0
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 8.3e-40 167.5 149 61.7
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 8.3e-40 167.5 134 68.7
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 8.3e-40 167.5 145 63.4
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 1.1e-39 167.2 143 66.4
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.1e-39 167.2 126 69.8
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 1.4e-39 166.8 143 63.6
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 1.8e-39 166.4 141 64.5
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 2.4e-39 166.0 123 72.4
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 3.2e-39 165.6 142 64.8
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 3.2e-39 165.6 123 72.4
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 4.1e-39 165.2 140 66.4
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 5.4e-39 164.9 161 58.4
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 7.0e-39 164.5 148 61.5
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 7.0e-39 164.5 145 62.1
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 9.2e-39 164.1 140 67.1
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 9.2e-39 164.1 140 67.1
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 1.2e-38 163.7 134 65.7
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 1.6e-38 163.3 145 62.1
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 3.5e-38 162.2 146 61.0
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 3.5e-38 162.2 154 58.4
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 4.6e-38 161.8 144 63.2
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 6.0e-38 161.4 148 62.2
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 7.8e-38 161.0 145 61.4
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 1.0e-37 160.6 148 60.8
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.0e-37 160.6 126 69.8
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 1.7e-37 159.8 146 59.6
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 1.7e-37 159.8 161 55.3
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 1.7e-37 159.8 131 64.9
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 3.0e-37 159.1 140 62.9
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 3.9e-37 158.7 148 61.5
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 3.9e-37 158.7 146 58.9
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 5.0e-37 158.3 134 61.9
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 5.0e-37 158.3 112 74.1
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 6.6e-37 157.9 125 68.0
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 8.6e-37 157.5 141 61.7
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 1.5e-36 156.8 144 61.8
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 1.9e-36 156.4 142 62.0
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 1.9e-36 156.4 142 61.3
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 1.9e-36 156.4 142 62.0
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 1.9e-36 156.4 145 60.7
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 2.5e-36 156.0 142 61.3
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.5e-36 156.0 144 61.8
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.5e-36 156.0 144 61.8
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 2.5e-36 156.0 145 60.7
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 3.3e-36 155.6 142 62.0
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 3.3e-36 155.6 141 63.1
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 3.3e-36 155.6 140 60.7
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 3.3e-36 155.6 146 60.3
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 1.2e-35 153.7 140 62.1
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 2.1e-35 152.9 144 60.4
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 3.6e-35 152.1 140 59.3
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 3.6e-35 152.1 144 58.3
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 3.6e-35 152.1 144 61.1
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 1.1e-34 150.6 131 61.1
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 1.1e-34 150.6 148 56.1
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 1.1e-34 150.6 134 62.7
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 1.4e-34 150.2 139 60.4
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 1.8e-34 149.8 149 58.4
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 1.8e-34 149.8 131 60.3
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 4.0e-34 148.7 142 59.9
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 8.9e-34 147.5 135 58.5
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 9.8e-33 144.1 139 58.3
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.9e-32 142.5 166 53.0
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 3.7e-32 142.1 218 44.5
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 4.9e-32 141.7 142 55.6
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 6.4e-32 141.4 125 65.6
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 1.4e-31 140.2 124 59.7
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 4.1e-31 138.7 175 50.3
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 4.1e-31 138.7 142 53.5
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 5.4e-31 138.3 136 57.4
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 5.4e-31 138.3 141 57.4
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 5.4e-31 138.3 135 57.0
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 4.6e-30 135.2 131 59.5
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 4.6e-30 135.2 137 54.7
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 3.0e-29 132.5 161 50.9
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 1.9e-28 129.8 145 51.7
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 7.3e-28 127.9 146 52.1
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 2.8e-27 125.9 113 59.3
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 2.0e-25 119.8 126 54.8
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 2.6e-25 119.4 107 55.1
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 9.2e-23 110.9 76 75.0
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 2.7e-22 109.4 105 58.1
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 4.6e-22 108.6 307 32.2
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 1.2e-19 100.5 73 72.6
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 9.2e-15 84.3 69 66.7
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 1.6e-14 83.6 103 51.5
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 3.0e-13 79.3 134 37.3
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 2.8e-11 72.8 131 40.5
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 2.8e-11 72.8 131 40.5
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 6.2e-11 71.6 117 41.0
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 4.0e-10 68.9 73 56.2
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.2e-06 57.4 46 63.0


User provided reference genes

Program Settings