Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g089040 Pisum sativum HOM05D015594 ORTHO05D011336 1.5e-109 399.4 192 100.0
Psat5g080080 Pisum sativum HOM05D025318 ORTHO05D011336 1.5e-16 90.5 159 29.6
Psat5g142360 Pisum sativum HOM05D000340 ORTHO05D011336 4.4e-16 89.0 153 26.8
Psat3g084640 Pisum sativum HOM05D015594 ORTHO05D011336 1.6e-13 80.5 122 31.1
Aqoxy1G02399 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.7e-12 77.0 142 30.3
COL.COLO4_35424 Corchorus olitorius HOM05D000003 ORTHO05D000004 1.7e-12 77.0 151 33.1
Psat7g197160 Pisum sativum HOM05D010469 ORTHO05D000004 1.7e-12 77.0 148 29.1
Psat7g141440 Pisum sativum HOM05D015594 ORTHO05D011336 7.3e-11 71.6 99 32.3
Aqoxy5G02498 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.5e-11 71.2 146 26.0
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 1.4e-09 67.4 142 31.0
COL.COLO4_36939 Corchorus olitorius HOM05D000003 ORTHO05D000004 4.0e-09 65.9 102 33.3
Medtr1g026690 Medicago truncatula HOM05D000003 ORTHO05D000004 4.0e-09 65.9 158 27.8
PGSC0003DMG400006509 Solanum tuberosum HOM05D000003 ORTHO05D000004 4.0e-09 65.9 139 28.8
Aqoxy2G01460 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.2e-09 65.5 146 27.4
Psat7g070920 Pisum sativum HOM05D013949 ORTHO05D011336 6.8e-09 65.1 139 25.9
Lalb_Chr21g0309771 Lupinus albus HOM05D000003 ORTHO05D000004 8.9e-09 64.7 62 38.7
Aqoxy6G01346 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.2e-08 64.3 122 28.7
Thecc.05G228200 Theobroma cacao HOM05D000003 ORTHO05D000004 1.2e-08 64.3 84 35.7
Aqoxy1G02855 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.0e-08 63.5 145 29.0
Aqoxy4G01140 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.0e-08 63.5 145 29.0
MBI05_g07846_MAGBIO Magnolia biondii HOM05D003982 ORTHO05D004831 2.0e-08 63.5 95 32.6
Atru.chr1.3974 Acer truncatum HOM05D000003 ORTHO05D000004 5.8e-08 62.0 138 31.2
Aqoxy3G01412 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.5e-08 61.6 146 26.7
Aqoxy2G02832 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 9.8e-08 61.2 144 26.4
Thecc.09G211800 Theobroma cacao HOM05D009258 ORTHO05D009583 9.8e-08 61.2 79 34.2
Atru.chr4.3084 Acer truncatum HOM05D000003 ORTHO05D000004 1.3e-07 60.8 140 30.0
Hma1.2p1_3154F.1_g333360 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 1.3e-07 60.8 129 29.5
ECA233G2998 Erigeron canadensis HOM05D009093 ORTHO05D010576 2.2e-07 60.1 93 34.4
ECA236G1930 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.2e-07 60.1 109 31.2
Aqoxy3G02781 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.9e-07 59.7 110 25.5
Aqoxy4G00307 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.9e-07 59.7 146 26.0
Aqoxy5G01534 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.9e-07 59.7 113 27.4
Cpa.g.sc195.3 Carica papaya HOM05D000003 ORTHO05D000004 2.9e-07 59.7 138 29.0
Haze_08564 Corylus avellana HOM05D005971 ORTHO05D000006 3.7e-07 59.3 151 27.8
MBI10_g16721_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.7e-07 59.3 103 30.1
MBI01_g39982_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.9e-07 58.9 123 29.3
MBI06_g35598_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.9e-07 58.9 114 26.3
Atru.chr6.413 Acer truncatum HOM05D000003 ORTHO05D002259 6.4e-07 58.5 139 26.6
COL.COLO4_11923 Corchorus olitorius HOM05D000003 ORTHO05D000004 6.4e-07 58.5 131 31.3
Psat5g168720 Pisum sativum HOM05D013949 ORTHO05D012525 1.1e-06 57.8 135 25.9
Thecc.09G171600 Theobroma cacao HOM05D000003 ORTHO05D000004 1.9e-06 57.0 97 30.9
Psat3g139800 Pisum sativum HOM05D029979 ORTHO05D026065 2.4e-06 56.6 84 32.1
MBI01_g26131_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 3.2e-06 56.2 139 28.8
Aqoxy4G01530 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.1e-06 55.8 144 27.1
PGSC0003DMG400024990 Solanum tuberosum HOM05D000003 ORTHO05D000004 4.1e-06 55.8 138 24.6
Aqoxy1G03271 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.4e-06 55.5 112 25.0
Aqoxy7G02192 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.4e-06 55.5 140 25.7
MBI02_g21885_MAGBIO Magnolia biondii HOM05D003439 ORTHO05D004062 7.0e-06 55.1 142 28.9
Atru.chr4.1365 Acer truncatum HOM05D000003 ORTHO05D023207 9.2e-06 54.7 55 40.0
COL.COLO4_05373 Corchorus olitorius HOM05D008263 ORTHO05D000004 9.2e-06 54.7 71 39.4
Medtr0376s0020 Medicago truncatula HOM05D000181 ORTHO05D003134 9.2e-06 54.7 52 40.4
PGSC0003DMG400027303 Solanum tuberosum HOM05D000003 ORTHO05D000004 9.2e-06 54.7 140 29.3


User provided reference genes

Program Settings