Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g082600 Pisum sativum HOM05D009255 ORTHO05D011239 9.8e-45 183.3 110 100.0
TPR.G6325 Trifolium pratense HOM05D009255 ORTHO05D011239 8.7e-17 90.5 95 55.8
Medtr3g089105 Medicago truncatula HOM05D009255 ORTHO05D011239 2.5e-16 89.0 90 57.8
Glyma.06G121600 Glycine max HOM05D009255 ORTHO05D011239 4.3e-16 88.2 97 54.6
Phvul.009G134100 Phaseolus vulgaris HOM05D009255 ORTHO05D011239 2.1e-15 85.9 86 58.1
VMungo1309G1730 Vigna mungo HOM05D009255 ORTHO05D011239 2.8e-15 85.5 84 58.3
Glyma.04G241800 Glycine max HOM05D009255 ORTHO05D011239 6.9e-14 80.9 89 55.1
Lj1g0001909 Lotus japonicus HOM05D009255 ORTHO05D011239 9.9e-13 77.0 106 50.0
arahy.Tifrunner.gnm1.ann1.7FYT6C Arachis hypogaea HOM05D009255 ORTHO05D011239 1.1e-11 73.6 95 42.1
arahy.Tifrunner.gnm1.ann1.CGQ11J Arachis hypogaea HOM05D009255 ORTHO05D011239 1.1e-11 73.6 72 50.0
Lj1g0023437 Lotus japonicus HOM05D009255 ORTHO05D011239 3.2e-11 72.0 113 45.1
Medtr7g037350 Medicago truncatula HOM05D009255 ORTHO05D011239 5.4e-11 71.2 77 53.2
Lalb_Chr11g0066381 Lupinus albus HOM05D009255 ORTHO05D011239 5.1e-09 64.7 67 55.2
Thecc.08G142600 Theobroma cacao HOM05D029484 ORTHO05D011239 7.3e-08 60.8 69 49.3
Nn5g28574 Nelumbo nucifera HOM05D008093 ORTHO05D009840 2.1e-07 59.3 66 47.0
Actinidia06628 Actinidia chinensis HOM05D008093 ORTHO05D009840 2.8e-07 58.9 75 44.0
Actinidia16589 Actinidia chinensis HOM05D009255 ORTHO05D011239 2.8e-07 58.9 61 57.4
Gohir.A02G067700 Gossypium hirsutum HOM05D029484 ORTHO05D011239 2.8e-07 58.9 74 47.3
Gorai.005G083100 Gossypium raimondii HOM05D029484 ORTHO05D011239 2.8e-07 58.9 74 47.3
Manes.12G154600 Manihot esculenta HOM05D008093 ORTHO05D009840 6.2e-07 57.8 65 44.6
Actinidia15166 Actinidia chinensis HOM05D009255 ORTHO05D011239 8.1e-07 57.4 61 55.7
Cc07_g18370 Coffea canephora HOM05D008093 ORTHO05D009840 1.4e-06 56.6 68 48.5
Dinv41134 Davidia involucrata HOM05D009255 ORTHO05D011239 1.8e-06 56.2 71 49.3
Nitab4.5_0013695g0010 Nicotiana tabacum HOM05D008093 ORTHO05D009840 1.8e-06 56.2 65 46.2
PGSC0003DMG400028663 Solanum tuberosum HOM05D008093 ORTHO05D009840 1.8e-06 56.2 67 46.3
Peaxi162Scf00589g00323 Petunia axillaris HOM05D008093 ORTHO05D009840 3.1e-06 55.5 67 46.3
Solyc11g005930.2 Solanum lycopersicum HOM05D008093 ORTHO05D009840 3.1e-06 55.5 66 47.0
Gohir.A05G385600 Gossypium hirsutum HOM05D008093 ORTHO05D009840 5.3e-06 54.7 60 46.7
MD02G1150700 Malus domestica HOM05D008093 ORTHO05D009840 5.3e-06 54.7 57 49.1
MD15G1265300 Malus domestica HOM05D008093 ORTHO05D009840 5.3e-06 54.7 59 47.5
QL06p028766 Quercus lobata HOM05D008093 ORTHO05D009840 5.3e-06 54.7 67 43.3
ClCG02G000540 Citrullus lanatus HOM05D008093 ORTHO05D009840 6.9e-06 54.3 50 54.0
Sc09g0002370 Simmondsia chinensis HOM05D008093 ORTHO05D009840 6.9e-06 54.3 56 50.0
Sopen11g001870 Solanum pennellii HOM05D008093 ORTHO05D009840 6.9e-06 54.3 67 44.8
Nitab4.5_0000856g0010 Nicotiana tabacum HOM05D008093 ORTHO05D009840 9.0e-06 53.9 66 43.9
Oeu033661.1 Olea europaea HOM05D008093 ORTHO05D009840 9.0e-06 53.9 49 57.1
Os12g0187800 Oryza sativa ssp. japonica HOM05D008093 ORTHO05D009840 9.0e-06 53.9 50 54.0


User provided reference genes

Program Settings