Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 1.1e-190 669.8 338 100.0
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 5.1e-92 342.0 184 92.4
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 4.0e-89 332.4 180 93.9
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 4.5e-72 275.8 143 96.5
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 4.5e-64 249.2 143 86.7
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 1.6e-61 240.7 143 83.9
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 3.5e-61 239.6 140 85.0
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 4.6e-61 239.2 140 84.3
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 6.0e-61 238.8 140 85.7
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 6.0e-61 238.8 140 85.0
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 2.3e-60 236.9 140 85.0
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 1.8e-57 227.3 140 80.0
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 2.6e-56 223.4 139 81.3
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 3.4e-56 223.0 139 81.3
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 3.4e-56 223.0 139 81.3
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 3.4e-56 223.0 139 81.3
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 3.4e-56 223.0 139 81.3
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 1.3e-55 221.1 139 80.6
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 1.0e-52 211.5 135 78.5
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 2.9e-47 193.4 130 69.2
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 2.9e-47 193.4 129 69.0
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 2.9e-47 193.4 129 69.8
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 8.5e-47 191.8 128 68.8
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 1.4e-46 191.0 129 67.4
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 1.4e-46 191.0 129 67.4
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 4.2e-46 189.5 130 67.7
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 7.2e-46 188.7 149 61.1
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 7.2e-46 188.7 167 56.9
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 9.4e-46 188.3 130 67.7
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 9.4e-46 188.3 128 68.0
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 1.2e-45 188.0 128 69.5
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 1.2e-45 188.0 129 67.4
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 1.6e-45 187.6 102 94.1
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 3.6e-45 186.4 130 67.7
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 3.6e-45 186.4 130 66.9
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 7.9e-45 185.3 104 91.3
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 1.0e-44 184.9 132 65.2
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 1.0e-44 184.9 128 67.2
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 1.4e-44 184.5 128 66.4
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 2.3e-44 183.7 128 67.2
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 3.9e-44 183.0 127 66.1
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 6.7e-44 182.2 133 63.2
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 8.8e-44 181.8 135 61.5
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 1.1e-43 181.4 130 66.9
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 2.0e-43 180.6 128 64.1
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 7.4e-43 178.7 127 65.4
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 9.7e-43 178.3 132 62.1
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 2.8e-42 176.8 131 61.8
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 3.7e-42 176.4 134 61.9
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 3.7e-42 176.4 133 61.7
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 4.8e-42 176.0 144 57.6
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 4.8e-42 176.0 131 64.1
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 1.1e-41 174.9 127 64.6
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 2.4e-41 173.7 131 64.1
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 2.4e-41 173.7 128 64.1
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 3.1e-41 173.3 99 90.9
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 3.1e-41 173.3 128 65.6
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 5.3e-41 172.6 155 54.8
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 5.3e-41 172.6 159 54.7
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 1.2e-40 171.4 128 61.7
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 1.2e-40 171.4 129 60.5
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 1.2e-40 171.4 128 62.5
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 1.5e-40 171.0 133 59.4
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 1.5e-40 171.0 128 62.5
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 2.0e-40 170.6 134 61.2
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 2.0e-40 170.6 144 57.6
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 2.0e-40 170.6 140 58.6
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 2.6e-40 170.2 128 60.2
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 3.4e-40 169.9 135 63.0
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 3.4e-40 169.9 144 56.9
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 3.4e-40 169.9 141 58.2
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 4.5e-40 169.5 128 60.2
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 5.9e-40 169.1 144 56.2
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 5.9e-40 169.1 128 60.9
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 1.3e-39 167.9 129 58.1
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 1.7e-39 167.5 135 57.0
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 1.7e-39 167.5 128 60.9
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 2.9e-39 166.8 131 59.5
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 1.1e-38 164.9 147 54.4
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 1.9e-38 164.1 128 59.4
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 1.2e-37 161.4 130 60.0
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 1.2e-37 161.4 130 60.0
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 2.7e-37 160.2 121 66.1
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 3.6e-37 159.8 122 58.2
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 4.7e-37 159.5 128 60.2
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 1.0e-36 158.3 138 56.5
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 3.9e-36 156.4 130 59.2
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 3.9e-36 156.4 130 59.2
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 3.9e-36 156.4 242 41.3
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 2.2e-34 150.6 128 55.5
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 8.2e-34 148.7 136 53.7
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 1.1e-33 148.3 128 54.7
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 5.3e-33 146.0 123 56.1
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 5.9e-32 142.5 179 41.9
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 8.5e-31 138.7 143 48.3
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 4.2e-30 136.3 100 64.0
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 9.4e-30 135.2 134 55.2
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 1.2e-29 134.8 123 53.7
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 3.6e-29 133.3 92 66.3
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 6.1e-29 132.5 99 61.6
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 8.8e-28 128.6 142 45.8
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 1.2e-27 128.3 106 58.5
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 1.2e-27 128.3 90 66.7
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 2.0e-27 127.5 107 57.9
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 4.4e-27 126.3 128 50.0
Psat0s304g0040 Pisum sativum HOM05D001995 ORTHO05D001952 6.3e-26 122.5 66 90.9
Psat2g058720 Pisum sativum HOM05D001995 ORTHO05D001952 3.1e-25 120.2 94 75.5
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 5.3e-25 119.4 86 66.3
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 2.0e-24 117.5 204 34.8
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 2.0e-24 117.5 90 61.1
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 7.7e-24 115.5 90 57.8
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 1.0e-23 115.2 91 60.4
Ca_13193_v3 Cicer arietinum L. HOM05D001995 ORTHO05D001952 9.4e-22 108.6 129 49.6
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 1.7e-18 97.8 163 37.4
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 5.4e-17 92.8 84 53.6
Psat2g146160 Pisum sativum HOM05D001995 ORTHO05D001952 3.8e-15 86.7 43 95.3
Psat5g183720 Pisum sativum HOM05D000079 ORTHO05D000211 8.6e-15 85.5 46 95.7
Phvul.001G032900 Phaseolus vulgaris HOM05D001995 ORTHO05D001952 4.0e-12 76.6 66 63.6
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 2.0e-11 74.3 128 35.9
Glyma.04G050200 Glycine max HOM05D001995 ORTHO05D001952 9.8e-11 72.0 68 55.9
Psat4g165480 Pisum sativum HOM05D000276 ORTHO05D006204 3.1e-09 67.0 46 69.6
Medtr3g049150 Medicago truncatula HOM05D000079 ORTHO05D000211 1.6e-08 64.7 45 75.6
Glyma.14G091900 Glycine max HOM05D001995 ORTHO05D001952 2.0e-08 64.3 66 54.5
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 2.7e-08 63.9 56 57.1
TPR.G13566 Trifolium pratense HOM05D000079 ORTHO05D000211 2.7e-08 63.9 45 71.1
TPR.G13551 Trifolium pratense HOM05D000079 ORTHO05D000211 4.5e-08 63.2 45 73.3
Ca_14637_v3 Cicer arietinum L. HOM05D000079 ORTHO05D000211 5.9e-08 62.8 46 71.7
Medtr3g049140 Medicago truncatula HOM05D000079 ORTHO05D000211 7.8e-08 62.4 45 71.1
Lalb_Chr23g0267721 Lupinus albus HOM05D001995 ORTHO05D001952 1.3e-07 61.6 113 39.8
TPR.G4546 Trifolium pratense HOM05D000079 ORTHO05D000211 1.1e-06 58.5 45 66.7
Cre01.g054650 Chlamydomonas reinhardtii HOM05D006843 ORTHO05D008517 3.3e-06 57.0 91 36.3
arahy.Tifrunner.gnm1.ann1.K5TY51 Arachis hypogaea HOM05D001995 ORTHO05D001952 7.3e-06 55.8 68 48.5
Medtr1g016920 Medicago truncatula HOM05D001995 ORTHO05D001952 7.3e-06 55.8 33 81.8


User provided reference genes

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