Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g060040 Pisum sativum HOM05D000181 ORTHO05D008796 7.9e-53 210.3 116 100.0
Ca_16934_v3 Cicer arietinum L. HOM05D000181 ORTHO05D008796 9.7e-51 203.4 116 87.9
TPR.G34653 Trifolium pratense HOM05D000181 ORTHO05D008796 6.3e-50 200.7 116 81.9
Lj1g0000900 Lotus japonicus HOM05D000181 ORTHO05D008796 1.1e-49 199.9 116 81.0
Phvul.009G149600 Phaseolus vulgaris HOM05D000181 ORTHO05D008796 2.4e-49 198.7 116 81.0
Glyma.04G213800 Glycine max HOM05D000181 ORTHO05D008796 6.9e-49 197.2 116 80.2
Glyma.06G152500 Glycine max HOM05D000181 ORTHO05D008796 6.9e-49 197.2 116 79.3
Lalb_Chr08g0238431 Lupinus albus HOM05D000181 ORTHO05D008796 1.5e-48 196.1 116 79.3
VMungo1309G1858 Vigna mungo HOM05D000181 ORTHO05D008796 4.5e-48 194.5 116 80.2
Gohir.A11G056700 Gossypium hirsutum HOM05D000181 ORTHO05D008796 4.2e-46 188.0 116 74.1
Medtr3g096000 Medicago truncatula HOM05D000181 ORTHO05D008796 4.2e-46 188.0 116 91.4
Atru.chr4.922 Acer truncatum HOM05D000181 ORTHO05D008796 5.5e-46 187.6 116 73.3
CSS0046503 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D008796 9.4e-46 186.8 116 74.1
Gohir.D11G060900 Gossypium hirsutum HOM05D000181 ORTHO05D008796 1.6e-45 186.0 116 73.3
Gorai.007G065600 Gossypium raimondii HOM05D000181 ORTHO05D008796 1.6e-45 186.0 116 73.3
Dinv06068 Davidia involucrata HOM05D000181 ORTHO05D008796 2.1e-45 185.7 116 72.4
Manes.13G083000 Manihot esculenta HOM05D000181 ORTHO05D008796 2.1e-45 185.7 116 71.6
QL06p029080 Quercus lobata HOM05D000181 ORTHO05D008796 3.6e-45 184.9 115 72.2
CsaV3_6G041690 Cucumis sativus L. HOM05D000181 ORTHO05D008796 1.0e-44 183.3 116 69.8
Sabra05G0050600 Salix brachista HOM05D000181 ORTHO05D008796 1.0e-44 183.3 116 70.7
TAR625G0260 Trochodendron aralioides HOM05D000181 ORTHO05D008796 1.0e-44 183.3 116 71.6
Nitab4.5_0000174g0060 Nicotiana tabacum HOM05D000181 ORTHO05D008796 1.4e-44 183.0 116 70.7
Nitab4.5_0003622g0010 Nicotiana tabacum HOM05D000181 ORTHO05D008796 1.8e-44 182.6 116 70.7
Peaxi162Scf00066g01518 Petunia axillaris HOM05D000181 ORTHO05D008796 1.8e-44 182.6 115 71.3
Potri.005G059700 Populus trichocarpa HOM05D000181 ORTHO05D008796 1.8e-44 182.6 116 70.7
THA.LOC104799548 Tarenaya hassleriana HOM05D000181 ORTHO05D008796 1.8e-44 182.6 116 71.6
Thecc.01G129300 Theobroma cacao HOM05D000181 ORTHO05D008796 2.3e-44 182.2 116 69.8
GSVIVG01026499001 Vitis vinifera HOM05D001952 ORTHO05D008796 2.3e-44 182.2 116 69.8
Nn5g28591 Nelumbo nucifera HOM05D000181 ORTHO05D008796 3.0e-44 181.8 116 71.6
Prupe.2G008800 Prunus persica HOM05D000181 ORTHO05D008796 3.0e-44 181.8 116 70.7
Sopen04g026280 Solanum pennellii HOM05D000181 ORTHO05D008796 3.9e-44 181.4 116 69.8
FvH4_1g24180 Fragaria vesca HOM05D000181 ORTHO05D008796 5.1e-44 181.0 116 69.8
FAN19G2441 Fragaria x ananassa HOM05D000181 ORTHO05D008796 5.1e-44 181.0 116 69.8
Lj4C847G8 Lonicera japonica HOM05D000181 ORTHO05D008796 6.7e-44 180.6 116 72.4
TWI75G0221 Tripterygium wilfordii HOM05D000181 ORTHO05D008796 6.7e-44 180.6 116 71.6
FAN26G0955 Fragaria x ananassa HOM05D000181 ORTHO05D008796 8.8e-44 180.3 116 69.8
RcHm_v2.0_Chr2g0120571 Rosa chinensis HOM05D000181 ORTHO05D008796 8.8e-44 180.3 116 69.8
Solyc04g063360.3 Solanum lycopersicum HOM05D000181 ORTHO05D008796 8.8e-44 180.3 116 69.0
unitig_27.g25343 Utricularia gibba HOM05D000181 ORTHO05D008796 8.8e-44 180.3 116 67.2
CAN.G46.7 Capsicum annuum HOM05D000181 ORTHO05D008796 1.5e-43 179.5 116 68.1
CiPaw.03G123000 Carya illinoinensis HOM05D000181 ORTHO05D008796 2.5e-43 178.7 116 69.0
Ciclev10000267m.g Citrus clementina HOM05D000181 ORTHO05D008796 2.5e-43 178.7 116 69.0
Haze_25205 Corylus avellana HOM05D000181 ORTHO05D008796 2.5e-43 178.7 116 69.8
Sc07g0001700 Simmondsia chinensis HOM05D000181 ORTHO05D008796 3.3e-43 178.3 116 69.8
PSO017G6538 Papaver somniferum HOM05D000181 ORTHO05D008796 4.3e-43 177.9 116 69.0
AUR62017907 Chenopodium quinoa HOM05D000181 ORTHO05D008796 5.7e-43 177.6 116 67.2
MELO3C008051.2 Cucumis melo HOM05D000181 ORTHO05D008796 5.7e-43 177.6 114 68.4
AUR62003594 Chenopodium quinoa HOM05D000181 ORTHO05D008796 7.4e-43 177.2 116 67.2
BcaB02g09796 Brassica carinata HOM05D000181 ORTHO05D008796 9.7e-43 176.8 116 67.2
A06p31320 Brassica napus HOM05D000181 ORTHO05D008796 9.7e-43 176.8 116 67.2
BolC3t18429H Brassica oleracea HOM05D000181 ORTHO05D008796 9.7e-43 176.8 116 67.2
BraA06t26072Z Brassica rapa HOM05D000181 ORTHO05D008796 9.7e-43 176.8 116 67.2
PGR102G1783 Punica granatum HOM05D000181 ORTHO05D008796 9.7e-43 176.8 116 69.0
Ah.03g146800 Amaranthus hybridus HOM05D000181 ORTHO05D008796 1.3e-42 176.4 116 68.1
BcaC01g02686 Brassica carinata HOM05D000181 ORTHO05D008796 1.3e-42 176.4 116 66.4
C03p61660 Brassica napus HOM05D000181 ORTHO05D008796 1.3e-42 176.4 116 66.4
FAN23G2380 Fragaria x ananassa HOM05D000181 ORTHO05D008796 1.3e-42 176.4 116 68.1
SalBow1G1531 Salvia bowleyana HOM05D000181 ORTHO05D008796 1.3e-42 176.4 116 69.0
SalBow1G5893 Salvia bowleyana HOM05D000181 ORTHO05D008796 1.3e-42 176.4 116 69.0
Cc07_g18240 Coffea canephora HOM05D000181 ORTHO05D008796 1.7e-42 176.0 118 68.6
Lsat_1_v5_gn_4_137601 Lactuca sativa HOM05D000181 ORTHO05D008796 1.7e-42 176.0 116 68.1
Eucgr.H04960 Eucalyptus grandis HOM05D000181 ORTHO05D008796 2.2e-42 175.6 115 68.7
DCAR_014343 Daucus carota HOM05D000181 ORTHO05D008796 2.8e-42 175.3 116 65.5
Sp2g27650 Schrenkiella parvula HOM05D000181 ORTHO05D008796 2.8e-42 175.3 116 66.4
AT5G64580 Arabidopsis thaliana HOM05D000181 ORTHO05D008796 3.7e-42 174.9 116 66.4
Thhalv10003640m.g Eutrema salsugineum HOM05D000181 ORTHO05D008796 4.8e-42 174.5 116 65.5
Carub.0008s2538 Capsella rubella HOM05D000181 ORTHO05D008796 6.3e-42 174.1 116 65.5
AL8G42000 Arabidopsis lyrata HOM05D000181 ORTHO05D008796 8.2e-42 173.7 116 65.5
CARHR278550 Cardamine hirsuta HOM05D000181 ORTHO05D008796 1.1e-41 173.3 116 65.5
Actinidia20086 Actinidia chinensis HOM05D000181 ORTHO05D008796 1.4e-41 172.9 116 71.6
Aa31LG1G17360 Aethionema arabicum HOM05D000181 ORTHO05D008796 2.4e-41 172.2 116 66.4
PSO170G5995 Papaver somniferum HOM05D000181 ORTHO05D008796 2.4e-41 172.2 116 67.2
Duzib147G0781 Durio zibethinus HOM05D000181 ORTHO05D008796 3.1e-41 171.8 115 69.6
HanXRQChr15g0493481 Helianthus annuus HOM05D000181 ORTHO05D008796 3.1e-41 171.8 116 66.4
EL10Ac6g15283 Beta vulgaris HOM05D000181 ORTHO05D008796 5.3e-41 171.0 116 65.5
FAN23G1442 Fragaria x ananassa HOM05D000181 ORTHO05D008796 5.3e-41 171.0 116 67.2
Sed0015491 Sechium edule HOM05D000181 ORTHO05D008796 5.3e-41 171.0 116 65.5
Aqoxy5G02248 Aquilegia oxysepala HOM05D000181 ORTHO05D008796 1.2e-40 169.9 115 67.8
Hund04481 Selenicereus undatus HOM05D000181 ORTHO05D008796 4.5e-40 167.9 116 68.1
Oeu037813.3 Olea europaea HOM05D000181 ORTHO05D008796 5.9e-40 167.5 120 66.7
ECA233G1045 Erigeron canadensis HOM05D000181 ORTHO05D008796 1.0e-39 166.8 116 64.7
ATR1136G075 Amborella trichopoda HOM05D000181 ORTHO05D008796 8.5e-39 163.7 116 63.8
Migut.H00729 Erythranthe guttata HOM05D000181 ORTHO05D008796 8.5e-39 163.7 117 65.0
CDE08G1321 Ceratophyllum demersum HOM05D000181 ORTHO05D008796 1.4e-38 162.9 116 62.1
CiPaw.03G123300 Carya illinoinensis HOM05D000181 ORTHO05D008796 4.7e-37 157.9 104 66.3
SGA_v2.0_scaffold289G47267 Striga asiatica HOM05D000181 ORTHO05D008796 5.1e-36 154.5 116 61.2
HPP92_009285 Vanilla planifolia HOM05D000181 ORTHO05D008796 2.2e-34 149.1 116 61.2
MBI03_g00431_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D008796 3.1e-33 145.2 97 66.0
arahy.Tifrunner.gnm1.ann1.ESH7KG Arachis hypogaea HOM05D000219 ORTHO05D008796 7.0e-33 144.1 81 85.2
COL.COLO4_35699 Corchorus olitorius HOM05D000181 ORTHO05D008796 1.0e-31 140.2 116 59.5
MD02G1315900 Malus domestica HOM05D000181 ORTHO05D008796 4.7e-29 131.3 68 85.3
AagrBONN_evm.TU.Sc2ySwM_362.1257 Anthoceros agrestis HOM05D000181 ORTHO05D008796 2.3e-28 129.0 82 63.4
Cpa.g.sc382.2 Carica papaya HOM05D000181 ORTHO05D008796 1.4e-25 119.8 80 66.2
Pp3c4_8640 Physcomitrium patens HOM05D000181 ORTHO05D008796 1.4e-25 119.8 115 46.1
Mapoly0081s0059 Marchantia polymorpha HOM05D000181 ORTHO05D008796 1.8e-25 119.4 82 58.5
SMO358G0281 Selaginella moellendorffii HOM05D000181 ORTHO05D008796 1.3e-23 113.2 80 55.0
CBR_g6364 Chara braunii HOM05D000181 ORTHO05D008796 8.8e-20 100.5 76 52.6
Prupe.1G190200 Prunus persica HOM05D000181 ORTHO05D008796 8.3e-18 94.0 52 78.8
ClCG01G015450 Citrullus lanatus HOM05D000181 ORTHO05D008796 1.7e-10 69.7 54 59.3


User provided reference genes

Program Settings