Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g057400 Pisum sativum HOM05D002628 ORTHO05D002785 1.8e-116 422.5 210 100.0
TPR.G31107 Trifolium pratense HOM05D002628 ORTHO05D002785 3.6e-72 275.4 196 73.0
Medtr7g056603 Medicago truncatula HOM05D002628 ORTHO05D002785 1.2e-62 243.8 195 67.2
Ca_26871_v3 Cicer arietinum L. HOM05D002628 ORTHO05D002785 1.4e-60 236.9 196 66.3
Glyma.08G352600 Glycine max HOM05D002628 ORTHO05D002785 4.6e-51 205.3 196 57.7
Glyma.18G169600 Glycine max HOM05D002628 ORTHO05D002785 8.7e-50 201.1 195 55.9
Lj1g0019543 Lotus japonicus HOM05D002628 ORTHO05D002785 1.6e-48 196.8 195 55.4
Phvul.008G126600 Phaseolus vulgaris HOM05D002628 ORTHO05D002785 1.6e-48 196.8 196 55.1
Lalb_Chr01g0022291 Lupinus albus HOM05D002628 ORTHO05D002785 1.8e-47 193.4 196 53.1
Psat3g145600 Pisum sativum HOM05D002628 ORTHO05D002785 3.1e-47 192.6 108 88.0
VMungo1383G1872 Vigna mungo HOM05D002628 ORTHO05D002785 5.8e-46 188.3 196 54.1
Medtr0340s0020 Medicago truncatula HOM05D002628 ORTHO05D002785 1.9e-41 173.3 134 70.1
Lalb_Chr03g0041701 Lupinus albus HOM05D002628 ORTHO05D002785 2.1e-40 169.9 196 48.0
arahy.Tifrunner.gnm1.ann1.23VDWQ Arachis hypogaea HOM05D002628 ORTHO05D002785 5.3e-39 165.2 197 50.8
arahy.Tifrunner.gnm1.ann1.82MK2E Arachis hypogaea HOM05D002628 ORTHO05D002785 3.4e-38 162.5 197 50.3
Lalb_Chr19g0125651 Lupinus albus HOM05D002628 ORTHO05D002785 3.8e-37 159.1 196 46.4
Lj3g0004121 Lotus japonicus HOM05D002628 ORTHO05D002785 4.8e-32 142.1 196 43.9
Glyma.03G081300 Glycine max HOM05D002628 ORTHO05D002785 7.6e-30 134.8 196 42.9
Phvul.010G018800 Phaseolus vulgaris HOM05D002628 ORTHO05D002785 2.5e-28 129.8 196 40.8
Glyma.16G093800 Glycine max HOM05D002628 ORTHO05D002785 2.7e-27 126.3 196 42.3
QL09p053994 Quercus lobata HOM05D002628 ORTHO05D002785 3.6e-19 99.4 194 35.6
Haze_24810 Corylus avellana HOM05D002628 ORTHO05D002785 6.1e-19 98.6 194 34.0
Cfa002577 Carpinus fangiana HOM05D002628 ORTHO05D002785 1.1e-17 94.4 194 32.5
Dinv12687 Davidia involucrata HOM05D002628 ORTHO05D002785 1.5e-17 94.0 196 35.7
Duzib211G0579 Durio zibethinus HOM05D002628 ORTHO05D002785 2.0e-14 83.6 190 30.0
Dinv19196 Davidia involucrata HOM05D002628 ORTHO05D002785 5.9e-14 82.0 193 35.2
Duzib133G0258 Durio zibethinus HOM05D002628 ORTHO05D002785 3.8e-13 79.3 192 31.2
RcHm_v2.0_Chr6g0284671 Rosa chinensis HOM05D002628 ORTHO05D002785 6.5e-13 78.6 181 34.3
Atru.chr5.2101 Acer truncatum HOM05D002628 ORTHO05D002785 1.9e-12 77.0 189 32.8
Thecc.01G224600 Theobroma cacao HOM05D002628 ORTHO05D002785 5.5e-12 75.5 189 30.2
FvH4_2g18860 Fragaria vesca HOM05D002628 ORTHO05D002785 1.6e-11 73.9 181 33.7
FAN24G2878 Fragaria x ananassa HOM05D002628 ORTHO05D002785 2.1e-11 73.6 181 33.7
MD05G1174400 Malus domestica HOM05D002628 ORTHO05D002785 3.6e-11 72.8 181 31.5
Ciclev10018446m.g Citrus clementina HOM05D002628 ORTHO05D002785 4.7e-11 72.4 193 32.6
COL.COLO4_15677 Corchorus olitorius HOM05D002628 ORTHO05D002785 6.1e-11 72.0 196 28.6
FAN27G0734 Fragaria x ananassa HOM05D002628 ORTHO05D002785 2.3e-10 70.1 181 32.6
Gorai.004G226000 Gossypium raimondii HOM05D002628 ORTHO05D002785 2.3e-10 70.1 196 28.1
MD10G1163500 Malus domestica HOM05D002628 ORTHO05D002785 2.3e-10 70.1 182 31.9
Cc01_g16950 Coffea canephora HOM05D002628 ORTHO05D002785 3.9e-10 69.3 196 31.1
Gohir.D08G212600 Gossypium hirsutum HOM05D002628 ORTHO05D002785 6.7e-10 68.6 190 28.9
Prupe.8G201800 Prunus persica HOM05D002628 ORTHO05D002785 2.6e-09 66.6 181 32.6
TAR633G2086 Trochodendron aralioides HOM05D002628 ORTHO05D002785 3.3e-09 66.2 184 28.8
FAN15G1468 Fragaria x ananassa HOM05D002628 ORTHO05D002785 5.7e-09 65.5 181 31.5
CSS0048005 Camellia sinensis var. sinensis HOM05D002628 ORTHO05D002785 7.4e-09 65.1 187 31.0
Duzib138G1695 Durio zibethinus HOM05D002628 ORTHO05D002785 9.7e-09 64.7 189 26.5
CSS0046762 Camellia sinensis var. sinensis HOM05D002628 ORTHO05D002785 1.7e-08 63.9 183 28.4
GSVIVG01028685001 Vitis vinifera HOM05D002628 ORTHO05D002785 1.7e-08 63.9 189 29.1
Manes.12G045400 Manihot esculenta HOM05D002628 ORTHO05D002785 2.4e-07 60.1 188 29.3
TAR362G0009 Trochodendron aralioides HOM05D002628 ORTHO05D002785 5.3e-07 58.9 188 27.7
Manes.13G047100 Manihot esculenta HOM05D002628 ORTHO05D002785 1.5e-06 57.4 183 27.3
Potri.014G189900 Populus trichocarpa HOM05D002628 ORTHO05D002785 2.6e-06 56.6 181 27.1
Sabra14G0142700 Salix brachista HOM05D002628 ORTHO05D002785 5.9e-06 55.5 190 26.8


User provided reference genes

Program Settings