Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g054880 Pisum sativum HOM05D002012 ORTHO05D001992 5.0e-99 364.4 178 100.0
Psat3g052200 Pisum sativum HOM05D002012 ORTHO05D001992 1.2e-07 60.8 78 47.4
Psat7g132200 Pisum sativum HOM05D002012 ORTHO05D001992 2.0e-07 60.1 78 50.0
Ca_08757_v3 Cicer arietinum L. HOM05D002012 ORTHO05D001992 5.9e-07 58.5 78 47.4
Medtr7g099030 Medicago truncatula HOM05D002012 ORTHO05D001992 5.9e-07 58.5 78 47.4
Lalb_Chr25g0289781 Lupinus albus HOM05D002012 ORTHO05D001992 7.7e-07 58.2 106 36.8
Glyma.03G168600 Glycine max HOM05D002012 ORTHO05D001992 1.0e-06 57.8 106 36.8
Gohir.A11G134100 Gossypium hirsutum HOM05D002012 ORTHO05D001992 1.0e-06 57.8 112 35.7
Lj1g0010723 Lotus japonicus HOM05D002012 ORTHO05D001992 1.0e-06 57.8 78 46.2
Sabra02G0194200 Salix brachista HOM05D002012 ORTHO05D001992 1.0e-06 57.8 112 35.7
VMungo1383G3347 Vigna mungo HOM05D002012 ORTHO05D001992 1.0e-06 57.8 78 46.2
Aa31LG8G17310 Aethionema arabicum HOM05D002012 ORTHO05D001992 1.7e-06 57.0 122 34.4
CiPaw.04G191100 Carya illinoinensis HOM05D002012 ORTHO05D001992 1.7e-06 57.0 112 34.8
Duzib138G0128 Durio zibethinus HOM05D002012 ORTHO05D001992 1.7e-06 57.0 78 44.9
Glyma.19G170000 Glycine max HOM05D002012 ORTHO05D001992 1.7e-06 57.0 106 36.8
C07p00810 Brassica napus HOM05D002012 ORTHO05D001992 2.2e-06 56.6 78 41.0
Hma1.2p1_2051F.1_g312560 Hydrangea macrophylla HOM05D002012 ORTHO05D001992 2.2e-06 56.6 106 36.8
Potri.002G255500 Populus trichocarpa HOM05D002012 ORTHO05D001992 2.2e-06 56.6 78 44.9
TPR.G30853 Trifolium pratense HOM05D002012 ORTHO05D001992 2.2e-06 56.6 78 47.4
CARHR110850 Cardamine hirsuta HOM05D002012 ORTHO05D001992 2.9e-06 56.2 78 41.0
Gohir.D11G140200 Gossypium hirsutum HOM05D002012 ORTHO05D001992 2.9e-06 56.2 112 34.8
Gorai.007G150400 Gossypium raimondii HOM05D002012 ORTHO05D001992 2.9e-06 56.2 112 34.8
AL3G53270 Arabidopsis lyrata HOM05D002012 ORTHO05D001992 3.8e-06 55.8 78 41.0
AT2G20320 Arabidopsis thaliana HOM05D002012 ORTHO05D001992 3.8e-06 55.8 78 41.0
Carub.0003s3466 Capsella rubella HOM05D002012 ORTHO05D001992 3.8e-06 55.8 78 41.0
Thhalv10001892m.g Eutrema salsugineum HOM05D002012 ORTHO05D001992 3.8e-06 55.8 78 41.0
Sp3g33560 Schrenkiella parvula HOM05D002012 ORTHO05D001992 3.8e-06 55.8 78 41.0
BcaC06g36715 Brassica carinata HOM05D002012 ORTHO05D001992 5.0e-06 55.5 78 41.0
A07p00390 Brassica napus HOM05D002012 ORTHO05D001992 5.0e-06 55.5 78 41.0
BolC7t40520H Brassica oleracea HOM05D002012 ORTHO05D001992 5.0e-06 55.5 78 41.0
BraA07t27831Z Brassica rapa HOM05D002012 ORTHO05D001992 5.0e-06 55.5 78 41.0
Nitab4.5_0002538g0090 Nicotiana tabacum HOM05D002012 ORTHO05D001992 5.0e-06 55.5 106 35.8
Nitab4.5_0003167g0100 Nicotiana tabacum HOM05D002012 ORTHO05D001992 5.0e-06 55.5 106 35.8
Prupe.8G213500 Prunus persica HOM05D002012 ORTHO05D001992 5.0e-06 55.5 82 42.7
arahy.Tifrunner.gnm1.ann1.NJ6SD5 Arachis hypogaea HOM05D002012 ORTHO05D001992 6.5e-06 55.1 82 40.2
Ciclev10018880m.g Citrus clementina HOM05D002012 ORTHO05D001992 6.5e-06 55.1 115 33.9
COL.COLO4_20955 Corchorus olitorius HOM05D002012 ORTHO05D001992 6.5e-06 55.1 112 34.8
Haze_24718 Corylus avellana HOM05D002012 ORTHO05D001992 6.5e-06 55.1 121 33.1
Gohir.D07G209700 Gossypium hirsutum HOM05D002012 ORTHO05D001992 6.5e-06 55.1 112 34.8
Gorai.001G237100 Gossypium raimondii HOM05D002012 ORTHO05D001992 6.5e-06 55.1 112 34.8
Lalb_Chr01g0019471 Lupinus albus HOM05D002012 ORTHO05D001992 6.5e-06 55.1 106 34.9
Oeu052090.1 Olea europaea HOM05D002012 ORTHO05D001992 6.5e-06 55.1 106 34.9
BcaB03g16819 Brassica carinata HOM05D002012 ORTHO05D001992 8.5e-06 54.7 78 41.0
Gohir.A07G203700 Gossypium hirsutum HOM05D002012 ORTHO05D001992 8.5e-06 54.7 112 34.8


User provided reference genes

Program Settings