Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Psat5g045200 Pisum sativum HOM05D005468 ORTHO05D006789 4.3e-127 458.0 229 100.0
Ca_15981_v3 Cicer arietinum L. HOM05D005468 ORTHO05D006789 5.3e-125 451.1 229 97.8
Lj1g0015279 Lotus japonicus HOM05D005468 ORTHO05D006789 6.9e-125 450.7 229 97.8
Lalb_Chr23g0266811 Lupinus albus HOM05D005468 ORTHO05D006789 1.2e-124 449.9 229 97.4
Medtr3g100940 Medicago truncatula HOM05D005468 ORTHO05D006789 2.0e-124 449.1 229 97.4
TPR.G26072 Trifolium pratense HOM05D005468 ORTHO05D006789 4.4e-124 448.0 229 97.4
Phvul.009G061800 Phaseolus vulgaris HOM05D005468 ORTHO05D006789 7.6e-124 447.2 229 96.9
Lalb_Chr08g0245731 Lupinus albus HOM05D005468 ORTHO05D006789 1.3e-123 446.4 229 96.9
arahy.Tifrunner.gnm1.ann1.P2WCGJ Arachis hypogaea HOM05D005468 ORTHO05D006789 2.2e-123 445.7 229 95.6
arahy.Tifrunner.gnm1.ann1.Y0EE8X Arachis hypogaea HOM05D005468 ORTHO05D006789 2.2e-123 445.7 229 95.6
Glyma.04G035800 Glycine max HOM05D005468 ORTHO05D006789 2.2e-123 445.7 229 96.9
VMungo1309G2021 Vigna mungo HOM05D005468 ORTHO05D006789 2.2e-123 445.7 229 96.9
Glyma.06G035800 Glycine max HOM05D005468 ORTHO05D006789 2.9e-123 445.3 229 96.9
Cfa018481 Carpinus fangiana HOM05D005468 ORTHO05D006789 1.4e-122 443.0 229 94.8
Duzib116G0868 Durio zibethinus HOM05D005468 ORTHO05D006789 1.9e-122 442.6 229 94.8
Manes.18G025300 Manihot esculenta HOM05D005468 ORTHO05D006789 2.4e-122 442.2 227 94.3
TWI56G0523 Tripterygium wilfordii HOM05D005468 ORTHO05D006789 2.4e-122 442.2 229 94.3
Cc10_g03660 Coffea canephora HOM05D005468 ORTHO05D006789 4.2e-122 441.4 227 95.6
Duzib093G1518 Durio zibethinus HOM05D005468 ORTHO05D006789 7.1e-122 440.7 229 94.8
GSVIVG01009588001 Vitis vinifera HOM05D005468 ORTHO05D006789 7.1e-122 440.7 229 93.9
Potri.002G130100 Populus trichocarpa HOM05D005468 ORTHO05D006789 9.3e-122 440.3 227 94.7
Thecc.08G017100 Theobroma cacao HOM05D005468 ORTHO05D006789 1.2e-121 439.9 229 94.8
SalBow8G4730 Salvia bowleyana HOM05D005468 ORTHO05D006789 1.6e-121 439.5 227 94.3
Ciclev10002374m.g Citrus clementina HOM05D005468 ORTHO05D006789 2.1e-121 439.1 229 94.3
Eucgr.F02400 Eucalyptus grandis HOM05D005468 ORTHO05D006789 2.1e-121 439.1 229 93.9
Rhsim06G0040800 Rhododendron simsii HOM05D005468 ORTHO05D006789 2.1e-121 439.1 227 94.7
Hma1.2p1_0260F.1_g104510 Hydrangea macrophylla HOM05D005468 ORTHO05D006789 3.5e-121 438.3 229 94.3
Gohir.D05G201600 Gossypium hirsutum HOM05D005468 ORTHO05D006789 6.0e-121 437.6 229 93.9
Gorai.009G207300 Gossypium raimondii HOM05D005468 ORTHO05D006789 6.0e-121 437.6 229 93.9
PGR031G2816 Punica granatum HOM05D005468 ORTHO05D006789 6.0e-121 437.6 229 94.3
vmacro21583 Vaccinium macrocarpon HOM05D005468 ORTHO05D006789 6.0e-121 437.6 227 94.3
CiPaw.15G066600 Carya illinoinensis HOM05D005468 ORTHO05D006789 7.8e-121 437.2 227 93.8
Potri.014G037100 Populus trichocarpa HOM05D005468 ORTHO05D006789 7.8e-121 437.2 227 93.8
Prupe.1G387900 Prunus persica HOM05D005468 ORTHO05D006789 1.0e-120 436.8 229 93.4
RcHm_v2.0_Chr6g0300041 Rosa chinensis HOM05D005468 ORTHO05D006789 1.0e-120 436.8 229 92.6
FAN27G0003 Fragaria x ananassa HOM05D005468 ORTHO05D006789 2.3e-120 435.6 229 92.1
Gohir.A05G198900 Gossypium hirsutum HOM05D005468 ORTHO05D006789 2.3e-120 435.6 229 93.4
Gorai.010G015600 Gossypium raimondii HOM05D005468 ORTHO05D006789 2.3e-120 435.6 227 93.4
CiPaw.16G051900 Carya illinoinensis HOM05D005468 ORTHO05D006789 3.0e-120 435.3 227 93.8
FvH4_2g40630 Fragaria vesca HOM05D005468 ORTHO05D006789 3.0e-120 435.3 229 92.1
Sc15g0006600 Simmondsia chinensis HOM05D005468 ORTHO05D006789 3.0e-120 435.3 229 91.7
Cpa.g.sc64.18 Carica papaya HOM05D005468 ORTHO05D006789 3.9e-120 434.9 227 93.4
COL.COLO4_26415 Corchorus olitorius HOM05D005468 ORTHO05D006789 3.9e-120 434.9 227 92.5
FAN20G0953 Fragaria x ananassa HOM05D005468 ORTHO05D006789 6.6e-120 434.1 229 91.7
Nn5g29408 Nelumbo nucifera HOM05D005468 ORTHO05D006789 8.7e-120 433.7 229 91.7
FAN15G3574 Fragaria x ananassa HOM05D005468 ORTHO05D006789 1.5e-119 433.0 229 91.3
Gohir.A06G015000 Gossypium hirsutum HOM05D005468 ORTHO05D006789 1.9e-119 432.6 227 93.4
QL02p006494 Quercus lobata HOM05D005468 ORTHO05D006789 1.9e-119 432.6 227 92.5
TAR625G1030 Trochodendron aralioides HOM05D005468 ORTHO05D006789 1.9e-119 432.6 229 93.0
SGA_v2.0_scaffold28G11772 Striga asiatica HOM05D005468 ORTHO05D006789 3.3e-119 431.8 227 92.1
Migut.N02685 Erythranthe guttata HOM05D005468 ORTHO05D006789 4.3e-119 431.4 227 92.5
Manes.05G168700 Manihot esculenta HOM05D005468 ORTHO05D006789 4.3e-119 431.4 227 92.1
THA.LOC104803401 Tarenaya hassleriana HOM05D005468 ORTHO05D006789 9.6e-119 430.3 227 91.6
TAR381G1584 Trochodendron aralioides HOM05D005468 ORTHO05D006789 2.8e-118 428.7 229 91.3
Sabra02G0102000 Salix brachista HOM05D005468 ORTHO05D006789 3.6e-118 428.3 227 93.0
MSTRG.22278 Avicennia marina HOM05D005468 ORTHO05D006789 6.2e-118 427.6 227 91.6
CAN.G1002.2 Capsicum annuum HOM05D005468 ORTHO05D006789 6.2e-118 427.6 227 91.6
MBI16_g31482_MAGBIO Magnolia biondii HOM05D005468 ORTHO05D006789 1.8e-117 426.0 220 94.1
Actinidia38034 Actinidia chinensis HOM05D005468 ORTHO05D006789 4.0e-117 424.9 229 90.4
HanXRQChr02g0046441 Helianthus annuus HOM05D005468 ORTHO05D006789 4.0e-117 424.9 229 90.8
EL10Ac1g01754 Beta vulgaris HOM05D005468 ORTHO05D006789 6.9e-117 424.1 227 89.4
Lsat_1_v5_gn_1_19180 Lactuca sativa HOM05D005468 ORTHO05D006789 1.2e-116 423.3 227 91.6
THA.LOC104813200 Tarenaya hassleriana HOM05D005468 ORTHO05D006789 1.2e-116 423.3 227 90.7
Aa31sc119G90 Aethionema arabicum HOM05D005468 ORTHO05D006789 2.0e-116 422.5 227 89.4
Migut.C00650 Erythranthe guttata HOM05D005468 ORTHO05D006789 2.0e-116 422.5 227 89.0
CANSAT56G1446 Cannabis sativa HOM05D005468 ORTHO05D006789 2.6e-116 422.2 227 90.3
BcaB07g33823 Brassica carinata HOM05D005468 ORTHO05D006789 9.9e-116 420.2 229 90.0
BcaC08g42963 Brassica carinata HOM05D005468 ORTHO05D006789 9.9e-116 420.2 229 90.0
C06p02040 Brassica napus HOM05D005468 ORTHO05D006789 9.9e-116 420.2 229 90.0
BraA10t42894Z Brassica rapa HOM05D005468 ORTHO05D006789 9.9e-116 420.2 229 90.0
Sp1g34660 Schrenkiella parvula HOM05D005468 ORTHO05D006789 9.9e-116 420.2 229 90.0
Actinidia29851 Actinidia chinensis HOM05D005468 ORTHO05D006789 1.3e-115 419.9 229 89.5
PGSC0003DMG400015450 Solanum tuberosum HOM05D005468 ORTHO05D006789 1.7e-115 419.5 229 90.4
Thhalv10011754m.g Eutrema salsugineum HOM05D005468 ORTHO05D006789 2.2e-115 419.1 229 89.5
PSO210G2601 Papaver somniferum HOM05D005468 ORTHO05D006789 2.9e-115 418.7 229 87.3
Sopen12g030860 Solanum pennellii HOM05D005468 ORTHO05D006789 3.8e-115 418.3 229 90.0
PSO170G5983 Papaver somniferum HOM05D005468 ORTHO05D006789 8.4e-115 417.2 229 86.9
AL1G54040 Arabidopsis lyrata HOM05D005468 ORTHO05D006789 2.4e-114 415.6 229 88.2
MD15G1034100 Malus domestica HOM05D005468 ORTHO05D006789 2.4e-114 415.6 227 89.0
AT1G47640 Arabidopsis thaliana HOM05D005468 ORTHO05D006789 1.2e-113 413.3 229 88.2
MSTRG.24315 Avicennia marina HOM05D005468 ORTHO05D006789 1.2e-113 413.3 227 88.1
Carub.0001s3642 Capsella rubella HOM05D005468 ORTHO05D006789 1.2e-113 413.3 229 87.8
BolC6t35332H Brassica oleracea HOM05D005468 ORTHO05D006789 2.1e-113 412.5 238 86.6
Gohir.D06G013000 Gossypium hirsutum HOM05D005468 ORTHO05D006789 2.7e-113 412.1 227 90.3
Zm00001eb058600 Zea mays HOM05D005468 ORTHO05D006789 4.6e-113 411.4 226 86.3
Os03g0766000 Oryza sativa ssp. japonica HOM05D005468 ORTHO05D006789 7.9e-113 410.6 226 86.7
BcaC07g37205 Brassica carinata HOM05D005468 ORTHO05D006789 1.3e-112 409.8 229 86.9
A08p05550 Brassica napus HOM05D005468 ORTHO05D006789 1.8e-112 409.5 229 86.9
BolC8t47397H Brassica oleracea HOM05D005468 ORTHO05D006789 2.3e-112 409.1 229 86.9
Dinv36016 Davidia involucrata HOM05D005468 ORTHO05D006789 3.0e-112 408.7 229 90.0
BraA08t32559Z Brassica rapa HOM05D005468 ORTHO05D006789 6.7e-112 407.5 229 86.5
MD08G1039400 Malus domestica HOM05D005468 ORTHO05D006789 1.9e-111 406.0 229 86.9
A10p06260 Brassica napus HOM05D005468 ORTHO05D006789 2.5e-111 405.6 256 80.5
C08p06100 Brassica napus HOM05D005468 ORTHO05D006789 2.5e-111 405.6 229 86.5
Zm00001eb214040 Zea mays HOM05D005468 ORTHO05D006789 3.1e-109 398.7 227 83.7
Aqoxy6G00937 Aquilegia oxysepala HOM05D005468 ORTHO05D006789 5.3e-109 397.9 227 85.0
CDE04G3466 Ceratophyllum demersum HOM05D005468 ORTHO05D006789 4.5e-108 394.8 227 83.7
CsaV3_3G044590 Cucumis sativus L. HOM05D005468 ORTHO05D006789 5.5e-106 387.9 203 93.6
Sabra14G0026700 Salix brachista HOM05D005468 ORTHO05D006789 4.6e-105 384.8 202 93.1
Nn6g32145 Nelumbo nucifera HOM05D005468 ORTHO05D006789 2.3e-104 382.5 229 84.3
Hund26608 Selenicereus undatus HOM05D005468 ORTHO05D006789 2.3e-104 382.5 202 92.1
HPP92_019640 Vanilla planifolia HOM05D005468 ORTHO05D006789 2.3e-104 382.5 229 80.3
ECA247G3714 Erigeron canadensis HOM05D005468 ORTHO05D006789 8.7e-104 380.6 201 93.5
Mapoly0136s0007 Marchantia polymorpha HOM05D005468 ORTHO05D006789 4.0e-101 371.7 227 77.5
Pp3c3_13070 Physcomitrium patens HOM05D005468 ORTHO05D006789 3.8e-99 365.2 227 75.3
CSS0002701 Camellia sinensis var. sinensis HOM05D005468 ORTHO05D006789 3.2e-98 362.1 190 95.3
Sed0015581 Sechium edule HOM05D005468 ORTHO05D006789 3.2e-98 362.1 233 79.4
Nitab4.5_0000790g0020 Nicotiana tabacum HOM05D005468 ORTHO05D006789 1.2e-97 360.1 250 75.2
SMO119G0125 Selaginella moellendorffii HOM05D005468 ORTHO05D006789 1.2e-97 360.1 229 73.8
SMO163G0011 Selaginella moellendorffii HOM05D005468 ORTHO05D006789 1.2e-97 360.1 229 73.8
SEGI_18559 Sequoiadendron giganteum HOM05D005468 ORTHO05D006789 2.1e-97 359.4 210 80.5
unitig_26.g10028 Utricularia gibba HOM05D005468 ORTHO05D006789 2.1e-97 359.4 200 88.0
Haze_17591 Corylus avellana HOM05D005468 ORTHO05D006789 2.7e-97 359.0 191 93.2
Dinv39358 Davidia involucrata HOM05D005468 ORTHO05D006789 3.5e-97 358.6 190 92.6
BcaB04g17508 Brassica carinata HOM05D005468 ORTHO05D006789 1.0e-96 357.1 229 78.2
ATR0733G175 Amborella trichopoda HOM05D005468 ORTHO05D006789 1.5e-95 353.2 197 88.3
Nitab4.5_0000453g0110 Nicotiana tabacum HOM05D005468 ORTHO05D006789 3.3e-95 352.1 191 90.6
Oeu028451.1 Olea europaea HOM05D005468 ORTHO05D006789 3.3e-95 352.1 227 78.9
Peaxi162Scf00064g00217 Petunia axillaris HOM05D005468 ORTHO05D006789 1.6e-94 349.7 187 93.0
CBR_g99 Chara braunii HOM05D005468 ORTHO05D006789 2.4e-93 345.9 226 72.1
Atru.BG.240.p Acer truncatum HOM05D005468 ORTHO05D006789 3.1e-93 345.5 185 93.0
Ah.03g134890 Amaranthus hybridus HOM05D005468 ORTHO05D006789 1.4e-90 336.7 185 88.6
Sed0011570 Sechium edule HOM05D005468 ORTHO05D006789 1.2e-89 333.6 226 73.9
Atru.chr13.591 Acer truncatum HOM05D005468 ORTHO05D006789 2.9e-83 312.4 160 95.0
Lj1C905G11 Lonicera japonica HOM05D001696 ORTHO05D001746 9.4e-82 307.4 164 92.7
AUR62033873 Chenopodium quinoa HOM05D005468 ORTHO05D006789 1.0e-80 303.9 355 49.9
CARHR037270 Cardamine hirsuta HOM05D005468 ORTHO05D006789 2.6e-76 289.3 162 86.4
CARHR054190 Cardamine hirsuta HOM05D005468 ORTHO05D006789 1.8e-69 266.5 162 77.2
Migut.O00871 Erythranthe guttata HOM05D005468 ORTHO05D006789 1.5e-58 230.3 120 92.5
CARHR034590 Cardamine hirsuta HOM05D005468 ORTHO05D006789 2.7e-57 226.1 131 80.2
AagrBONN_evm.TU.Sc2ySwM_362.508 Anthoceros agrestis HOM05D005468 ORTHO05D006789 5.2e-56 221.9 190 59.5
CARHR259240 Cardamine hirsuta HOM05D005468 ORTHO05D006789 3.2e-37 159.5 140 60.0
CARHR037280 Cardamine hirsuta HOM05D005468 ORTHO05D006789 1.6e-28 130.6 69 91.3
arahy.Tifrunner.gnm1.ann1.N94XAP Arachis hypogaea HOM05D005468 ORTHO05D006789 1.3e-22 110.9 62 77.4
CAN.G371.92 Capsicum annuum HOM05D005468 ORTHO05D006789 3.3e-18 96.3 152 40.8
Actinidia01618 Actinidia chinensis HOM05D000509 ORTHO05D000466 5.6e-18 95.5 124 48.4
AUR62040094 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.6e-15 85.1 45 84.4
arahy.Tifrunner.gnm1.ann1.APL3GL Arachis hypogaea HOM05D005468 ORTHO05D006789 1.3e-14 84.3 81 53.1
Rhsim05G0183600 Rhododendron simsii HOM05D000190 ORTHO05D000113 7.1e-13 78.6 52 67.3
arahy.Tifrunner.gnm1.ann1.R2S7J0 Arachis hypogaea HOM05D005468 ORTHO05D004485 2.1e-12 77.0 79 50.6
MD11G1104700 Malus domestica HOM05D005468 ORTHO05D006789 7.3e-10 68.6 49 67.3
Aa31LG9G12690 Aethionema arabicum HOM05D005468 ORTHO05D006789 2.1e-09 67.0 82 50.0
ClCG05G019450 Citrullus lanatus HOM05D005468 ORTHO05D006789 5.8e-07 58.9 26 100.0


User provided reference genes

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